RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 CETN1Q12798 172 aa12.03□□□□□ -0.48
LSM2-209ENST00000470083 ANKRD40Q6AI12 368 aa12.03□□□□□ -0.48
LSM2-209ENST00000470083 ZC3H18Q86VM9 953 aaKnown RBP12.03□□□□□ -0.48
LSM2-209ENST00000470083 SMYD4Q8IYR2 804 aaPredicted RBP12.03□□□□□ -0.48
LSM2-209ENST00000470083 ZNF397Q8NF99 534 aaPredicted RBP12.03□□□□□ -0.48
LSM2-209ENST00000470083 HCAR2Q8TDS4 363 aa12.03□□□□□ -0.48
LSM2-209ENST00000470083 PDCD6IPQ8WUM4 868 aaKnown RBP12.03□□□□□ -0.48
LSM2-209ENST00000470083 NT5C3BQ969T7 300 aa12.03□□□□□ -0.48
LSM2-209ENST00000470083 TTYH3Q9C0H2 523 aa12.03□□□□□ -0.48
LSM2-209ENST00000470083 ZMYND15Q9H091 742 aa12.03□□□□□ -0.48
LSM2-209ENST00000470083 APMAPQ9HDC9 416 aa12.03□□□□□ -0.48
LSM2-209ENST00000470083 TMEM51Q9NW97 253 aa12.03□□□□□ -0.48
LSM2-209ENST00000470083 PPARGC1AQ9UBK2 798 aaKnown RBP12.03□□□□□ -0.48
LSM2-209ENST00000470083 STAP1Q9ULZ2 295 aa12.03□□□□□ -0.48
LSM2-209ENST00000470083 HPCAL4Q9UM19 191 aa12.03□□□□□ -0.48
LSM2-209ENST00000470083 DNHD1Q96M86 4753 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 A0A1B0GVL5 298 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 TSPAN11A1L157 253 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 INPP4BO15327 924 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 HNRNPRO43390 633 aaKnown RBP12.02□□□□□ -0.49
LSM2-209ENST00000470083 DNAJB5O75953 348 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 TMCC1O94876 653 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 IGSF6O95976 241 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 VARSP26640 1264 aaKnown RBP12.02□□□□□ -0.49
LSM2-209ENST00000470083 GNA15P30679 374 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 DLSTP36957 453 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 MMP12P39900 470 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 PGDP52209 483 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 SLC6A3Q01959 620 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 DEUP1Q05D60 604 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 NAA30Q147X3 362 aaPredicted RBP12.02□□□□□ -0.49
LSM2-209ENST00000470083 UGP2Q16851 508 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 PRR30Q53SZ7 412 aaPredicted RBP12.02□□□□□ -0.49
LSM2-209ENST00000470083 ERAP2Q6P179 960 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 LEKR1Q6ZMV7 388 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 ARHGAP22Q7Z5H3 698 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 TMEM135Q86UB9 458 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 NAGSQ8N159 534 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 WDTC1Q8N5D0 677 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 PATE1Q8WXA2 126 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 MARVELD3Q96A59 401 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 C5orf34Q96MH7 638 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 TSG101Q99816 390 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 LGR4Q9BXB1 951 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 WDR26Q9H7D7 661 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 CARS2Q9HA77 564 aaKnown RBP12.02□□□□□ -0.49
LSM2-209ENST00000470083 ACP6Q9NPH0 428 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 TRNAU1APQ9NX07 287 aaKnown RBP12.02□□□□□ -0.49
LSM2-209ENST00000470083 PPP4R2Q9NY27 417 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 MOSPD1Q9UJG1 213 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 CROTQ9UKG9 612 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 HPSEQ9Y251 543 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 SLC5A6Q9Y289 635 aa12.02□□□□□ -0.49
LSM2-209ENST00000470083 CDC14CA4D256 554 aa12.01□□□□□ -0.49
LSM2-209ENST00000470083 CFAP69A5D8W1 941 aa12.01□□□□□ -0.49
LSM2-209ENST00000470083 ZSCAN5CA6NGD5 496 aaPredicted RBP12.01□□□□□ -0.49
LSM2-209ENST00000470083 PDE2AO00408 941 aaPredicted RBP12.01□□□□□ -0.49
LSM2-209ENST00000470083 POLR1CO15160 346 aaPredicted RBP12.01□□□□□ -0.49
LSM2-209ENST00000470083 P4HA2O15460 535 aa12.01□□□□□ -0.49
LSM2-209ENST00000470083 RECQL5O94762 991 aaPredicted RBP12.01□□□□□ -0.49
LSM2-209ENST00000470083 RECKO95980 971 aa12.01□□□□□ -0.49
LSM2-209ENST00000470083 ERBB2P04626 1255 aa12.01□□□□□ -0.49
LSM2-209ENST00000470083 CMA1P23946 247 aa12.01□□□□□ -0.49
LSM2-209ENST00000470083 LEPRP48357 1165 aaKnown RBP12.01□□□□□ -0.49
LSM2-209ENST00000470083 MAPKAPK2P49137 400 aa12.01□□□□□ -0.49
LSM2-209ENST00000470083 SULT1E1P49888 294 aa12.01□□□□□ -0.49
LSM2-209ENST00000470083 SEMA5AQ13591 1074 aa12.01□□□□□ -0.49
LSM2-209ENST00000470083 PEX6Q13608 980 aa12.01□□□□□ -0.49
LSM2-209ENST00000470083 FOXD4L6Q3SYB3 417 aaPredicted RBP12.01□□□□□ -0.49
LSM2-209ENST00000470083 SLC30A9Q6PML9 568 aa12.01□□□□□ -0.49
LSM2-209ENST00000470083 WDR74Q6RFH5 385 aaPredicted RBP12.01□□□□□ -0.49
LSM2-209ENST00000470083 FOXD4L3Q6VB84 417 aaPredicted RBP12.01□□□□□ -0.49
LSM2-209ENST00000470083 TTC13Q8NBP0 860 aa12.01□□□□□ -0.49
LSM2-209ENST00000470083 OR10G6Q8NH81 332 aa12.01□□□□□ -0.49
LSM2-209ENST00000470083 AHCYL2Q96HN2 611 aaKnown RBP12.01□□□□□ -0.49
LSM2-209ENST00000470083 TRIM55Q9BYV6 548 aa12.01□□□□□ -0.49
LSM2-209ENST00000470083 MAGEH1Q9H213 219 aa12.01□□□□□ -0.49
LSM2-209ENST00000470083 MLXIPLQ9NP71 852 aa12.01□□□□□ -0.49
LSM2-209ENST00000470083 NDFIP2Q9NV92 336 aa12.01□□□□□ -0.49
LSM2-209ENST00000470083 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.01□□□□□ -0.49
LSM2-209ENST00000470083 RCOR3Q9P2K3 495 aaPredicted RBP12.01□□□□□ -0.49
LSM2-209ENST00000470083 ATP8A1Q9Y2Q0 1164 aa12.01□□□□□ -0.49
LSM2-209ENST00000470083 PCDHGA9Q9Y5G4 932 aaKnown RBP12.01□□□□□ -0.49
LSM2-209ENST00000470083 ARHGEF17Q96PE2 2063 aaPredicted RBP12.01□□□□□ -0.49
LSM2-209ENST00000470083 A8MU76 341 aa12□□□□□ -0.49
LSM2-209ENST00000470083 PIGNO95427 931 aa12□□□□□ -0.49
LSM2-209ENST00000470083 AK4P27144 223 aaPredicted RBP12□□□□□ -0.49
LSM2-209ENST00000470083 SNX16P57768 344 aa12□□□□□ -0.49
LSM2-209ENST00000470083 SLC25A52Q3SY17 297 aa12□□□□□ -0.49
LSM2-209ENST00000470083 SNAP47Q5SQN1 464 aa12□□□□□ -0.49
LSM2-209ENST00000470083 PAPD7Q5XG87 772 aaKnown RBP12□□□□□ -0.49
LSM2-209ENST00000470083 ATL3Q6DD88 541 aa12□□□□□ -0.49
LSM2-209ENST00000470083 BRAT1Q6PJG6 821 aa12□□□□□ -0.49
LSM2-209ENST00000470083 C6orf15Q6UXA7 325 aaPredicted RBP12□□□□□ -0.49
LSM2-209ENST00000470083 NLRP14Q86W24 1093 aa12□□□□□ -0.49
LSM2-209ENST00000470083 C1orf131Q8NDD1 294 aaKnown RBP12□□□□□ -0.49
LSM2-209ENST00000470083 CASKIN2Q8WXE0 1202 aa12□□□□□ -0.49
LSM2-209ENST00000470083 TBCBQ99426 244 aa12□□□□□ -0.49
LSM2-209ENST00000470083 SLC25A23Q9BV35 468 aa12□□□□□ -0.49
LSM2-209ENST00000470083 GTPBP4Q9BZE4 634 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms