RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 TMEM151AQ8N4L1 468 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 PCDH20Q8N6Y1 951 aaKnown RBP9.47□□□□□ -0.89
TOP3A-203ENST00000469739 OR13J1Q8NGT2 312 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 UROC1Q96N76 676 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 DEFB118Q96PH6 123 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 NPAS2Q99743 824 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 CCDC28BQ9BUN5 200 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 C1QTNF1Q9BXJ1 281 aa9.47□□□□□ -0.89
TOP3A-203ENST00000469739 HMX1Q9NP08 348 aaPredicted RBP9.47□□□□□ -0.89
TOP3A-203ENST00000469739 TLR8Q9NR97 1041 aaKnown RBP9.47□□□□□ -0.89
TOP3A-203ENST00000469739 VNN2O95498 520 aa9.46□□□□□ -0.89
TOP3A-203ENST00000469739 PMLP29590 882 aa9.46□□□□□ -0.89
TOP3A-203ENST00000469739 ADRA1AP35348 466 aa9.46□□□□□ -0.89
TOP3A-203ENST00000469739 RPL14P50914 215 aaKnown RBP9.46□□□□□ -0.89
TOP3A-203ENST00000469739 TBL3Q12788 808 aaKnown RBP9.46□□□□□ -0.89
TOP3A-203ENST00000469739 PLD1Q13393 1074 aa9.46□□□□□ -0.89
TOP3A-203ENST00000469739 EIF4EBP2Q13542 120 aaPredicted RBP9.46□□□□□ -0.89
TOP3A-203ENST00000469739 TSTD2Q5T7W7 516 aa9.46□□□□□ -0.89
TOP3A-203ENST00000469739 C6orf163Q5TEZ5 329 aa9.46□□□□□ -0.89
TOP3A-203ENST00000469739 LIPMQ5VYY2 423 aa9.46□□□□□ -0.89
TOP3A-203ENST00000469739 TIGD7Q6NT04 549 aaPredicted RBP9.46□□□□□ -0.89
TOP3A-203ENST00000469739 SCIMPQ6UWF3 145 aa9.46□□□□□ -0.89
TOP3A-203ENST00000469739 CLEC14AQ86T13 490 aa9.46□□□□□ -0.89
TOP3A-203ENST00000469739 ATP6V0D2Q8N8Y2 350 aa9.46□□□□□ -0.89
TOP3A-203ENST00000469739 RCN3Q96D15 328 aa9.46□□□□□ -0.89
TOP3A-203ENST00000469739 TSGA13Q96PP4 275 aa9.46□□□□□ -0.89
TOP3A-203ENST00000469739 TUBGCP5Q96RT8 1024 aa9.46□□□□□ -0.89
TOP3A-203ENST00000469739 IL1RL2Q9HB29 575 aa9.46□□□□□ -0.89
TOP3A-203ENST00000469739 FBRSL1Q9HCM7 1045 aaKnown RBP9.46□□□□□ -0.89
TOP3A-203ENST00000469739 NYNRINQ9P2P1 1898 aaKnown RBP9.46□□□□□ -0.9
TOP3A-203ENST00000469739 PRUNE2Q8WUY3 3088 aa9.46□□□□□ -0.9
TOP3A-203ENST00000469739 SNAP91O60641 907 aa9.46□□□□□ -0.9
TOP3A-203ENST00000469739 TM7SF2O76062 418 aa9.46□□□□□ -0.9
TOP3A-203ENST00000469739 HNRNPCP07910 306 aaKnown RBP eCLIP9.46□□□□□ -0.9
TOP3A-203ENST00000469739 MMP2P08253 660 aa9.46□□□□□ -0.9
TOP3A-203ENST00000469739 COX4I1P13073 169 aa9.46□□□□□ -0.9
TOP3A-203ENST00000469739 PAMP19021 973 aa9.46□□□□□ -0.9
TOP3A-203ENST00000469739 CPOXP36551 454 aa9.46□□□□□ -0.9
TOP3A-203ENST00000469739 HARS2P49590 506 aaKnown RBP9.46□□□□□ -0.9
TOP3A-203ENST00000469739 CDK7P50613 346 aa9.46□□□□□ -0.9
TOP3A-203ENST00000469739 CSE1LP55060 971 aaKnown RBP9.46□□□□□ -0.9
TOP3A-203ENST00000469739 SEMA3AQ14563 771 aa9.46□□□□□ -0.9
TOP3A-203ENST00000469739 ARTNQ5T4W7 220 aa9.46□□□□□ -0.9
TOP3A-203ENST00000469739 LHX8Q68G74 356 aa9.46□□□□□ -0.9
TOP3A-203ENST00000469739 KDELC1Q6UW63 502 aa9.46□□□□□ -0.9
TOP3A-203ENST00000469739 LSMEM2Q8N112 164 aa9.46□□□□□ -0.9
TOP3A-203ENST00000469739 LZTR1Q8N653 840 aa9.46□□□□□ -0.9
TOP3A-203ENST00000469739 APBB2Q92870 758 aa9.46□□□□□ -0.9
TOP3A-203ENST00000469739 SLC39A13Q96H72 371 aa9.46□□□□□ -0.9
TOP3A-203ENST00000469739 BTN2A3PQ96KV6 586 aa9.46□□□□□ -0.9
TOP3A-203ENST00000469739 NSMCE3Q96MG7 304 aa9.46□□□□□ -0.9
TOP3A-203ENST00000469739 TUBB6Q9BUF5 446 aa9.46□□□□□ -0.9
TOP3A-203ENST00000469739 TRIM8Q9BZR9 551 aa9.46□□□□□ -0.9
TOP3A-203ENST00000469739 IRF2BPLQ9H1B7 796 aa9.46□□□□□ -0.9
TOP3A-203ENST00000469739 SLC25A51Q9H1U9 297 aa9.46□□□□□ -0.9
TOP3A-203ENST00000469739 ABCG8Q9H221 673 aa9.46□□□□□ -0.9
TOP3A-203ENST00000469739 TLR9Q9NR96 1032 aa9.46□□□□□ -0.9
TOP3A-203ENST00000469739 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.46□□□□□ -0.9
TOP3A-203ENST00000469739 MYLKQ15746 1914 aa9.46□□□□□ -0.9
TOP3A-203ENST00000469739 MYO16Q9Y6X6 1858 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 C2orf78A6NCI8 922 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 F5H5T6 163 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 EOMESO95936 686 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 GALTP07902 379 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 RHOQP17081 205 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 ITGAXP20702 1163 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 TACR2P21452 398 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 NKX3-2P78367 333 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 NSUN2Q08J23 767 aaKnown RBP eCLIP9.45□□□□□ -0.9
TOP3A-203ENST00000469739 HNRNPDQ14103 355 aaKnown RBP9.45□□□□□ -0.9
TOP3A-203ENST00000469739 INSCQ1MX18 579 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 HECTD2Q5U5R9 776 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 EPGNQ6UW88 154 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 TMEM207Q6UWW9 146 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 SPATA24Q86W54 205 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 ARHGAP24Q8N264 748 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 FBXO22Q8NEZ5 403 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 OR9I1Q8NGQ6 314 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 IMP4Q96G21 291 aaKnown RBP9.45□□□□□ -0.9
TOP3A-203ENST00000469739 CDRT15Q96T59 188 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 TM6SF2Q9BZW4 377 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.45□□□□□ -0.9
TOP3A-203ENST00000469739 NCKIPSDQ9NZQ3 722 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 CCDC167Q9P0B6 97 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 HSFX1Q9UBD0 423 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 PAIP2BQ9ULR5 123 aaKnown RBP9.45□□□□□ -0.9
TOP3A-203ENST00000469739 FRMPD3Q5JV73 1810 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 VWA8A3KMH1 1905 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 CCDC162PA2VCL2 907 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 TMEM221A6NGB7 291 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 TXNDC9O14530 226 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 GRID2O43424 1007 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 CAPN15O75808 1086 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 GOT2P00505 430 aaKnown RBP9.45□□□□□ -0.9
TOP3A-203ENST00000469739 SELPP16109 830 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 GJA1P17302 382 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 ITGB6P18564 788 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 FMO4P31512 558 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 GKP32189 559 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 ALDH7A1P49419 539 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms