RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 FGFBP2Q9BYJ0 223 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 ZNF518BQ9C0D4 1074 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 GPR88Q9GZN0 384 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 FAM124BQ9H5Z6 455 aaPredicted RBP6.54□□□□□ -1.36
PTCD3-208ENST00000469585 TMEM74BQ9NUR3 256 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 XPR1Q9UBH6 696 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 FBXW11Q9UKB1 542 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 CORO2BQ9UQ03 480 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 MTO1Q9Y2Z2 717 aaKnown RBP6.54□□□□□ -1.36
PTCD3-208ENST00000469585 NEU2Q9Y3R4 380 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 CLUHO75153 1309 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 PRAMEF33A0A0G2JMD5 474 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 TMEM200CA6NKL6 621 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 LRRIQ3A6PVS8 624 aaPredicted RBP6.53□□□□□ -1.36
PTCD3-208ENST00000469585 SMTNL1A8MU46 457 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 E7ENX8 843 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 F8W810 466 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 GOLGA6L19H0YKK7 550 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 FOXN3O00409 490 aaPredicted RBP6.53□□□□□ -1.36
PTCD3-208ENST00000469585 P4HA2O15460 535 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 CCL16O15467 120 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 PRAMEF10O60809 474 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 NDUFA10O95299 355 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 CAVIN2O95810 425 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 HLA-DRAP01903 254 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 TPM3P06753 285 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 CSH1P0DML2 217 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 CSH2P0DML3 217 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 CDC25CP30307 473 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 GCLMP48507 274 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 AARSP49588 968 aaKnown RBP eCLIP6.53□□□□□ -1.36
PTCD3-208ENST00000469585 STX17P56962 302 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 SNX16P57768 344 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 KRTAP10-2P60368 255 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 RPS16P62249 146 aaKnown RBP6.53□□□□□ -1.36
PTCD3-208ENST00000469585 NOP14P78316 857 aaKnown RBP6.53□□□□□ -1.36
PTCD3-208ENST00000469585 MC2RQ01718 297 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 TAP2Q03519 686 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 GOLGA8FQ08AF8 430 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 GOLGA8DPQ0D2H9 430 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 TWF1Q12792 350 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 FOXE3Q13461 319 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 RAB32Q13637 225 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 FILIP1LQ4L180 1135 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 MIIPQ5JXC2 388 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 WSCD1Q658N2 575 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 ANKRD40Q6AI12 368 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 SCARA5Q6ZMJ2 495 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 GET4Q7L5D6 327 aaPredicted RBP6.53□□□□□ -1.36
PTCD3-208ENST00000469585 SPRED1Q7Z699 444 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 GPR149Q86SP6 731 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 UNC93AQ86WB7 457 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 YAF2Q8IY57 180 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 RNF168Q8IYW5 571 aaPredicted RBP6.53□□□□□ -1.36
PTCD3-208ENST00000469585 PDCL2Q8N4E4 241 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 SLC15A4Q8N697 577 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 PSD4Q8NDX1 1056 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 STKLD1Q8NE28 680 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 CPEB3Q8NE35 698 aaKnown RBP6.53□□□□□ -1.36
PTCD3-208ENST00000469585 SLC22A17Q8WUG5 538 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 FUBP1Q96AE4 644 aaKnown RBP6.53□□□□□ -1.36
PTCD3-208ENST00000469585 CEP295NLQ96MC4 621 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 PGLYRP2Q96PD5 576 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 SYT15Q9BQS2 421 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 CLSTN3Q9BQT9 956 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 ANP32EQ9BTT0 268 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 UNKQ9C0B0 810 aaKnown RBP6.53□□□□□ -1.36
PTCD3-208ENST00000469585 ELOVL4Q9GZR5 314 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 NACA2Q9H009 215 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 MFSD1Q9H3U5 465 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 SMOC2Q9H3U7 446 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 THAP9Q9H5L6 903 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 CYP3A43Q9HB55 503 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 DMAC2Q9NW81 257 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 RAB20Q9NX57 234 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 GPRC5BQ9NZH0 403 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 PAXBP1Q9Y5B6 917 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 INSL5Q9Y5Q6 135 aa6.53□□□□□ -1.36
PTCD3-208ENST00000469585 WDR27A2RRH5 827 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 TMEM233B4DJY2 109 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 B8ZZF3 427 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 DCLK1O15075 740 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 KPNA5O15131 536 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 TACC1O75410 805 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 ERN1O75460 977 aaKnown RBP6.52□□□□□ -1.37
PTCD3-208ENST00000469585 AKAP3O75969 853 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 GLP2RO95838 553 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 AFPP02771 609 aaKnown RBP6.52□□□□□ -1.37
PTCD3-208ENST00000469585 ADRB1P08588 477 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 TRIM49P0CI25 452 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 TRIM49CP0CI26 452 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 MYL4P12829 197 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 WARSP23381 471 aaKnown RBP6.52□□□□□ -1.37
PTCD3-208ENST00000469585 SP100P23497 879 aaPredicted RBP6.52□□□□□ -1.37
PTCD3-208ENST00000469585 HOXD13P35453 343 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 AVPR1AP37288 418 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 VIPR2P41587 438 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 PPP3CCP48454 512 aa6.52□□□□□ -1.37
PTCD3-208ENST00000469585 ANXA11P50995 505 aaKnown RBP6.52□□□□□ -1.37
PTCD3-208ENST00000469585 MFAP3P55082 362 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms