RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 LMO7DNF2Z398 122 aa18.32■□□□□ 0.52
PHGDH-204ENST00000469443 GCATO75600 419 aa18.32■□□□□ 0.52
PHGDH-204ENST00000469443 HEXIM1O94992 359 aaKnown RBP18.32■□□□□ 0.52
PHGDH-204ENST00000469443 RASGRP1O95267 797 aa18.32■□□□□ 0.52
PHGDH-204ENST00000469443 LCA5LO95447 670 aa18.32■□□□□ 0.52
PHGDH-204ENST00000469443 MYF5P13349 255 aa18.32■□□□□ 0.52
PHGDH-204ENST00000469443 CCNB1P14635 433 aa18.32■□□□□ 0.52
PHGDH-204ENST00000469443 CES1P23141 567 aa18.32■□□□□ 0.52
PHGDH-204ENST00000469443 MAGEA1P43355 309 aa18.32■□□□□ 0.52
PHGDH-204ENST00000469443 HK3P52790 923 aa18.32■□□□□ 0.52
PHGDH-204ENST00000469443 HADHBP55084 474 aaKnown RBP18.32■□□□□ 0.52
PHGDH-204ENST00000469443 C1orf61Q13536 156 aa18.32■□□□□ 0.52
PHGDH-204ENST00000469443 ALG11Q2TAA5 492 aa18.32■□□□□ 0.52
PHGDH-204ENST00000469443 ENPP7Q6UWV6 458 aa18.32■□□□□ 0.52
PHGDH-204ENST00000469443 USP45Q70EL2 814 aa18.32■□□□□ 0.52
PHGDH-204ENST00000469443 PROSER1Q86XN7 944 aa18.32■□□□□ 0.52
PHGDH-204ENST00000469443 HID1Q8IV36 788 aa18.32■□□□□ 0.52
PHGDH-204ENST00000469443 CCDC13Q8IYE1 715 aa18.32■□□□□ 0.52
PHGDH-204ENST00000469443 CACTIN-AS1Q8N1I8 211 aa18.32■□□□□ 0.52
PHGDH-204ENST00000469443 PLD5Q8N7P1 536 aa18.32■□□□□ 0.52
PHGDH-204ENST00000469443 CCNYQ8ND76 341 aa18.32■□□□□ 0.52
PHGDH-204ENST00000469443 MDM1Q8TC05 714 aa18.32■□□□□ 0.52
PHGDH-204ENST00000469443 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.32■□□□□ 0.52
PHGDH-204ENST00000469443 PIH1D2Q8WWB5 315 aa18.32■□□□□ 0.52
PHGDH-204ENST00000469443 SCRN2Q96FV2 425 aa18.32■□□□□ 0.52
PHGDH-204ENST00000469443 WDR92Q96MX6 357 aa18.32■□□□□ 0.52
PHGDH-204ENST00000469443 MCCC1Q96RQ3 725 aaPredicted RBP18.32■□□□□ 0.52
PHGDH-204ENST00000469443 RBSNQ9H1K0 784 aa18.32■□□□□ 0.52
PHGDH-204ENST00000469443 KCTD5Q9NXV2 234 aa18.32■□□□□ 0.52
PHGDH-204ENST00000469443 NCKIPSDQ9NZQ3 722 aa18.32■□□□□ 0.52
PHGDH-204ENST00000469443 PPIL1Q9Y3C6 166 aa18.32■□□□□ 0.52
PHGDH-204ENST00000469443 COL27A1Q8IZC6 1860 aaPredicted RBP18.31■□□□□ 0.52
PHGDH-204ENST00000469443 NPIPB15A6NHN6 443 aaPredicted RBP18.31■□□□□ 0.52
PHGDH-204ENST00000469443 PSMD11O00231 422 aa18.31■□□□□ 0.52
PHGDH-204ENST00000469443 CACNB4O00305 520 aaPredicted RBP18.31■□□□□ 0.52
PHGDH-204ENST00000469443 FZD6O60353 706 aa18.31■□□□□ 0.52
PHGDH-204ENST00000469443 KRT1P04264 644 aa18.31■□□□□ 0.52
PHGDH-204ENST00000469443 GP1BAP07359 652 aa18.31■□□□□ 0.52
PHGDH-204ENST00000469443 ANXA6P08133 673 aa18.31■□□□□ 0.52
PHGDH-204ENST00000469443 TSHRP16473 764 aa18.31■□□□□ 0.52
PHGDH-204ENST00000469443 ZNF75DP51815 510 aa18.31■□□□□ 0.52
PHGDH-204ENST00000469443 KIAA1024LP59773 190 aa18.31■□□□□ 0.52
PHGDH-204ENST00000469443 SRP54P61011 504 aaKnown RBP18.31■□□□□ 0.52
PHGDH-204ENST00000469443 INSM1Q01101 510 aaPredicted RBP18.31■□□□□ 0.52
PHGDH-204ENST00000469443 DSC2Q02487 901 aa18.31■□□□□ 0.52
PHGDH-204ENST00000469443 ODF2Q5BJF6 829 aa18.31■□□□□ 0.52
PHGDH-204ENST00000469443 SLC9A4Q6AI14 798 aa18.31■□□□□ 0.52
PHGDH-204ENST00000469443 ESRP1Q6NXG1 681 aaKnown RBP18.31■□□□□ 0.52
PHGDH-204ENST00000469443 RHOT1Q8IXI2 618 aa18.31■□□□□ 0.52
PHGDH-204ENST00000469443 CCDC170Q8IYT3 715 aa18.31■□□□□ 0.52
PHGDH-204ENST00000469443 NDUFAF2Q8N183 169 aa18.31■□□□□ 0.52
PHGDH-204ENST00000469443 FSTL5Q8N475 847 aaPredicted RBP18.31■□□□□ 0.52
PHGDH-204ENST00000469443 LRRN4Q8WUT4 740 aa18.31■□□□□ 0.52
PHGDH-204ENST00000469443 TSACCQ96A04 125 aaPredicted RBP18.31■□□□□ 0.52
PHGDH-204ENST00000469443 FUBP1Q96AE4 644 aaKnown RBP18.31■□□□□ 0.52
PHGDH-204ENST00000469443 NUS1Q96E22 293 aa18.31■□□□□ 0.52
PHGDH-204ENST00000469443 MRFAP1L1Q96HT8 127 aa18.31■□□□□ 0.52
PHGDH-204ENST00000469443 MAK16Q9BXY0 300 aaKnown RBP18.31■□□□□ 0.52
PHGDH-204ENST00000469443 CLPBQ9H078 707 aa18.31■□□□□ 0.52
PHGDH-204ENST00000469443 DDX56Q9NY93 547 aaKnown RBP18.31■□□□□ 0.52
PHGDH-204ENST00000469443 DKK4Q9UBT3 224 aa18.31■□□□□ 0.52
PHGDH-204ENST00000469443 KLQ9UEF7 1012 aa18.31■□□□□ 0.52
PHGDH-204ENST00000469443 TTLL3Q9Y4R7 772 aa18.31■□□□□ 0.52
PHGDH-204ENST00000469443 PKD1L2Q7Z442 2459 aa18.31■□□□□ 0.52
PHGDH-204ENST00000469443 ZFC3H1O60293 1989 aaKnown RBP18.31■□□□□ 0.52
PHGDH-204ENST00000469443 TAF4O00268 1085 aa18.3■□□□□ 0.52
PHGDH-204ENST00000469443 APOL1O14791 398 aa18.3■□□□□ 0.52
PHGDH-204ENST00000469443 SPOPO43791 374 aa18.3■□□□□ 0.52
PHGDH-204ENST00000469443 HLA-DQB2P05538 268 aa18.3■□□□□ 0.52
PHGDH-204ENST00000469443 PDHA1P08559 390 aa18.3■□□□□ 0.52
PHGDH-204ENST00000469443 HOXC4P09017 264 aaPredicted RBP18.3■□□□□ 0.52
PHGDH-204ENST00000469443 KRT10P13645 584 aa18.3■□□□□ 0.52
PHGDH-204ENST00000469443 CTSEP14091 401 aa18.3■□□□□ 0.52
PHGDH-204ENST00000469443 ZFXP17010 805 aaPredicted RBP18.3■□□□□ 0.52
PHGDH-204ENST00000469443 COMTP21964 271 aa18.3■□□□□ 0.52
PHGDH-204ENST00000469443 LHCGRP22888 699 aa18.3■□□□□ 0.52
PHGDH-204ENST00000469443 KELP23276 732 aa18.3■□□□□ 0.52
PHGDH-204ENST00000469443 CYLC1P35663 651 aaPredicted RBP18.3■□□□□ 0.52
PHGDH-204ENST00000469443 TRIM23P36406 574 aa18.3■□□□□ 0.52
PHGDH-204ENST00000469443 NOP2P46087 812 aaKnown RBP18.3■□□□□ 0.52
PHGDH-204ENST00000469443 PPIDQ08752 370 aaKnown RBP18.3■□□□□ 0.52
PHGDH-204ENST00000469443 TARDBPQ13148 414 aaKnown RBP eCLIP18.3■□□□□ 0.52
PHGDH-204ENST00000469443 ARHGEF7Q14155 803 aa18.3■□□□□ 0.52
PHGDH-204ENST00000469443 ELOCQ15369 112 aa18.3■□□□□ 0.52
PHGDH-204ENST00000469443 DENND2CQ68D51 928 aa18.3■□□□□ 0.52
PHGDH-204ENST00000469443 PNCKQ6P2M8 343 aa18.3■□□□□ 0.52
PHGDH-204ENST00000469443 RD3Q7Z3Z2 195 aa18.3■□□□□ 0.52
PHGDH-204ENST00000469443 CBARPQ8N350 705 aaPredicted RBP18.3■□□□□ 0.52
PHGDH-204ENST00000469443 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.3■□□□□ 0.52
PHGDH-204ENST00000469443 TPCN2Q8NHX9 752 aa18.3■□□□□ 0.52
PHGDH-204ENST00000469443 ARRDC2Q8TBH0 407 aa18.3■□□□□ 0.52
PHGDH-204ENST00000469443 GLMNQ92990 594 aa18.3■□□□□ 0.52
PHGDH-204ENST00000469443 LGMNQ99538 433 aa18.3■□□□□ 0.52
PHGDH-204ENST00000469443 BOCQ9BWV1 1114 aa18.3■□□□□ 0.52
PHGDH-204ENST00000469443 CLCA2Q9UQC9 943 aa18.3■□□□□ 0.52
PHGDH-204ENST00000469443 HYOU1Q9Y4L1 999 aa18.3■□□□□ 0.52
PHGDH-204ENST00000469443 HEY1Q9Y5J3 304 aa18.3■□□□□ 0.52
PHGDH-204ENST00000469443 DGKBQ9Y6T7 804 aa18.3■□□□□ 0.52
PHGDH-204ENST00000469443 EME2A4GXA9 379 aaPredicted RBP18.29■□□□□ 0.52
PHGDH-204ENST00000469443 YY2O15391 372 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms