RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 SLC2A3P11169 496 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 ATP6V1B1P15313 513 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 TYMPP19971 482 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 CHRM3P20309 590 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 METTL21CQ5VZV1 264 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 NADSYN1Q6IA69 706 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 PIWIL4Q7Z3Z4 852 aaKnown RBP17.88■□□□□ 0.45
MCF2L-221ENST00000469415 OR6K2Q8NGY2 324 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 SPPL2BQ8TCT7 592 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 LRCH3Q96II8 777 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 PIF1Q9H611 641 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 MID1IP1Q9NPA3 183 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 TRAF6Q9Y4K3 522 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 GLP2RO95838 553 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 VCLP18206 1134 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 PLIN5Q00G26 463 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 ZNF549Q6P9A3 640 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 IFNEQ86WN2 208 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 PDSS2Q86YH6 399 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 CNTN4Q8IWV2 1026 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 ICA1LQ8NDH6 482 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 RDH11Q8TC12 318 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 KLHL32Q96NJ5 620 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 SERPINI1Q99574 410 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 MRPL1Q9BYD6 325 aaKnown RBP17.88■□□□□ 0.45
MCF2L-221ENST00000469415 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.88■□□□□ 0.45
MCF2L-221ENST00000469415 STK39Q9UEW8 545 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 CD3EAPO15446 510 aaKnown RBP17.87■□□□□ 0.45
MCF2L-221ENST00000469415 LDB2O43679 373 aa17.87■□□□□ 0.45
MCF2L-221ENST00000469415 H2AFYO75367 372 aaKnown RBP17.87■□□□□ 0.45
MCF2L-221ENST00000469415 HOXC13P31276 330 aa17.87■□□□□ 0.45
MCF2L-221ENST00000469415 SEMG2Q02383 582 aa17.87■□□□□ 0.45
MCF2L-221ENST00000469415 FBXL19Q6PCT2 694 aa17.87■□□□□ 0.45
MCF2L-221ENST00000469415 KBTBD6Q86V97 674 aa17.87■□□□□ 0.45
MCF2L-221ENST00000469415 UMODL1-AS1Q8N2C9 162 aa17.87■□□□□ 0.45
MCF2L-221ENST00000469415 FAM110BQ8TC76 370 aa17.87■□□□□ 0.45
MCF2L-221ENST00000469415 BTN2A3PQ96KV6 586 aa17.87■□□□□ 0.45
MCF2L-221ENST00000469415 PRKD2Q9BZL6 878 aa17.87■□□□□ 0.45
MCF2L-221ENST00000469415 H3BMM5 538 aa17.87■□□□□ 0.45
MCF2L-221ENST00000469415 PSMD12O00232 456 aaPredicted RBP17.87■□□□□ 0.45
MCF2L-221ENST00000469415 CA12O43570 354 aa17.87■□□□□ 0.45
MCF2L-221ENST00000469415 LINC00032P0C843 101 aa17.87■□□□□ 0.45
MCF2L-221ENST00000469415 ME2P23368 584 aa17.87■□□□□ 0.45
MCF2L-221ENST00000469415 FOLH1Q04609 750 aa17.87■□□□□ 0.45
MCF2L-221ENST00000469415 TMCO2Q7Z6W1 182 aaPredicted RBP17.87■□□□□ 0.45
MCF2L-221ENST00000469415 AMIGO2Q86SJ2 522 aa17.87■□□□□ 0.45
MCF2L-221ENST00000469415 RNF180Q86T96 592 aa17.87■□□□□ 0.45
MCF2L-221ENST00000469415 ISCA2Q86U28 154 aa17.87■□□□□ 0.45
MCF2L-221ENST00000469415 PQLC1Q8N2U9 271 aa17.87■□□□□ 0.45
MCF2L-221ENST00000469415 OR4K2Q8NGD2 314 aa17.87■□□□□ 0.45
MCF2L-221ENST00000469415 PKP2Q99959 881 aa17.87■□□□□ 0.45
MCF2L-221ENST00000469415 GALPQ9UBC7 116 aa17.87■□□□□ 0.45
MCF2L-221ENST00000469415 SPO11Q9Y5K1 396 aa17.87■□□□□ 0.45
MCF2L-221ENST00000469415 ZFP37Q9Y6Q3 630 aaPredicted RBP17.87■□□□□ 0.45
MCF2L-221ENST00000469415 A0A087X1B8 175 aa17.86■□□□□ 0.45
MCF2L-221ENST00000469415 SLC6A4P31645 630 aa17.86■□□□□ 0.45
MCF2L-221ENST00000469415 PSME3P61289 254 aa17.86■□□□□ 0.45
MCF2L-221ENST00000469415 ZNF423Q2M1K9 1284 aa17.86■□□□□ 0.45
MCF2L-221ENST00000469415 C6orf52Q5T4I8 152 aa17.86■□□□□ 0.45
MCF2L-221ENST00000469415 LILRA2Q8N149 483 aa17.86■□□□□ 0.45
MCF2L-221ENST00000469415 LPCAT1Q8NF37 534 aa17.86■□□□□ 0.45
MCF2L-221ENST00000469415 CALML6Q8TD86 181 aa17.86■□□□□ 0.45
MCF2L-221ENST00000469415 SCLYQ96I15 445 aa17.86■□□□□ 0.45
MCF2L-221ENST00000469415 NSMCE3Q96MG7 304 aa17.86■□□□□ 0.45
MCF2L-221ENST00000469415 PRDM5Q9NQX1 630 aaPredicted RBP17.86■□□□□ 0.45
MCF2L-221ENST00000469415 TLR8Q9NR97 1041 aaKnown RBP17.86■□□□□ 0.45
MCF2L-221ENST00000469415 TET1Q8NFU7 2136 aa17.86■□□□□ 0.45
MCF2L-221ENST00000469415 IQCF5A8MTL0 148 aa17.86■□□□□ 0.45
MCF2L-221ENST00000469415 SUPT3HB4E1H0 165 aa17.86■□□□□ 0.45
MCF2L-221ENST00000469415 NR5A2O00482 541 aa17.86■□□□□ 0.45
MCF2L-221ENST00000469415 ENPP3O14638 875 aa17.86■□□□□ 0.45
MCF2L-221ENST00000469415 SUPT3HO75486 399 aa17.86■□□□□ 0.45
MCF2L-221ENST00000469415 OAZ2O95190 189 aa17.86■□□□□ 0.45
MCF2L-221ENST00000469415 SLC10A3P09131 477 aa17.86■□□□□ 0.45
MCF2L-221ENST00000469415 ATXN1LP0C7T5 689 aaKnown RBP17.86■□□□□ 0.45
MCF2L-221ENST00000469415 SGSHP51688 502 aa17.86■□□□□ 0.45
MCF2L-221ENST00000469415 CAPRIN1Q14444 709 aaKnown RBP17.86■□□□□ 0.45
MCF2L-221ENST00000469415 AAGABQ6PD74 315 aa17.86■□□□□ 0.45
MCF2L-221ENST00000469415 HMGCLL1Q8TB92 370 aa17.86■□□□□ 0.45
MCF2L-221ENST00000469415 PPP2R3CQ969Q6 453 aa17.86■□□□□ 0.45
MCF2L-221ENST00000469415 PPWD1Q96BP3 646 aaKnown RBP17.86■□□□□ 0.45
MCF2L-221ENST00000469415 UROC1Q96N76 676 aa17.86■□□□□ 0.45
MCF2L-221ENST00000469415 ZBED2Q9BTP6 218 aa17.86■□□□□ 0.45
MCF2L-221ENST00000469415 POLR1EQ9GZS1 481 aaKnown RBP17.86■□□□□ 0.45
MCF2L-221ENST00000469415 STARD7Q9NQZ5 370 aa17.86■□□□□ 0.45
MCF2L-221ENST00000469415 VTI1BQ9UEU0 232 aa17.86■□□□□ 0.45
MCF2L-221ENST00000469415 V9GYQ6 96 aa17.86■□□□□ 0.45
MCF2L-221ENST00000469415 MTMR11A4FU01 709 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 CCDC160A6NGH7 325 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 RHOBTB1O94844 696 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 ALDH2P05091 517 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 COL6A2P12110 1019 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 ITGB6P18564 788 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 TACR2P21452 398 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 LEPRP48357 1165 aaKnown RBP17.85■□□□□ 0.45
MCF2L-221ENST00000469415 SLC11A1P49279 550 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 INHBEP58166 350 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 OR4D1Q15615 310 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 PLA2G4EQ3MJ16 856 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 DIS3LQ8TF46 1054 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms