RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 RIPOR3Q96MK2 946 aa19.02■□□□□ 0.64
SMC4-209ENST00000468653 ZDHHC6Q9H6R6 413 aa19.02■□□□□ 0.64
SMC4-209ENST00000468653 CAB39LQ9H9S4 337 aa19.02■□□□□ 0.64
SMC4-209ENST00000468653 MAGEE1Q9HCI5 957 aa19.02■□□□□ 0.64
SMC4-209ENST00000468653 CLDND1Q9NY35 253 aa19.02■□□□□ 0.64
SMC4-209ENST00000468653 DCDC2Q9UHG0 476 aa19.02■□□□□ 0.64
SMC4-209ENST00000468653 GRID1Q9ULK0 1009 aa19.02■□□□□ 0.64
SMC4-209ENST00000468653 SLC27A6Q9Y2P4 619 aa19.02■□□□□ 0.64
SMC4-209ENST00000468653 STX7O15400 261 aaKnown RBP19.01■□□□□ 0.63
SMC4-209ENST00000468653 CD3EAPO15446 510 aaKnown RBP19.01■□□□□ 0.63
SMC4-209ENST00000468653 GLRA3O75311 464 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 HAUS5O94927 633 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 USP10Q14694 798 aaKnown RBP19.01■□□□□ 0.63
SMC4-209ENST00000468653 PTPRRQ15256 657 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 PPM1JQ5JR12 505 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 MRNIPQ6NTE8 343 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 MFSD6LQ8IWD5 586 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 ETFBKMTQ8IXQ9 262 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 LRRC34Q8IZ02 419 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 OR4L1Q8NH43 312 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 CPEB1Q9BZB8 566 aaKnown RBP19.01■□□□□ 0.63
SMC4-209ENST00000468653 GPR63Q9BZJ6 419 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 DEC1Q9P2X7 70 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 ZNF711Q9Y462 761 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 WDR91A4D1P6 747 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 OTOL1A6NHN0 477 aaPredicted RBP19.01■□□□□ 0.63
SMC4-209ENST00000468653 TBX10O75333 385 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 SRPRAP08240 638 aaKnown RBP19.01■□□□□ 0.63
SMC4-209ENST00000468653 DLDP09622 509 aaKnown RBP19.01■□□□□ 0.63
SMC4-209ENST00000468653 ALPIP09923 528 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 SP100P23497 879 aaPredicted RBP19.01■□□□□ 0.63
SMC4-209ENST00000468653 FOXN2P32314 431 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 ETV4P43268 484 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 MAGEA12P43365 314 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 SLC6A11P48066 632 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 LEPRP48357 1165 aaKnown RBP19.01■□□□□ 0.63
SMC4-209ENST00000468653 POLD2P49005 469 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 DLX2Q07687 328 aaPredicted RBP19.01■□□□□ 0.63
SMC4-209ENST00000468653 GRM2Q14416 872 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 PDK4Q16654 411 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 GRAMD4Q6IC98 578 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 CNSTQ6PJW8 725 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 AFTPHQ6ULP2 937 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 RAPH1Q70E73 1250 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 SDCCAG8Q86SQ7 713 aaPredicted RBP19.01■□□□□ 0.63
SMC4-209ENST00000468653 TTC30BQ8N4P2 665 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 CPA6Q8N4T0 437 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 GPATCH11Q8N954 259 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 ACVR1CQ8NER5 493 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 GPR150Q8NGU9 434 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 ZNF473Q8WTR7 871 aaKnown RBP19.01■□□□□ 0.63
SMC4-209ENST00000468653 MRGPRX3Q96LB0 322 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 SUV39H2Q9H5I1 410 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 HPS4Q9NQG7 708 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 CATSPERZQ9NTU4 200 aa19.01■□□□□ 0.63
SMC4-209ENST00000468653 POLR3BQ9NW08 1133 aaPredicted RBP19.01■□□□□ 0.63
SMC4-209ENST00000468653 MARCH4Q9P2E8 410 aaPredicted RBP19.01■□□□□ 0.63
SMC4-209ENST00000468653 A0A096LPK6 155 aa19■□□□□ 0.63
SMC4-209ENST00000468653 FAM95CA0A1B0GW59 222 aa19■□□□□ 0.63
SMC4-209ENST00000468653 TTC34A8MYJ7 566 aa19■□□□□ 0.63
SMC4-209ENST00000468653 DRD4P21917 467 aa19■□□□□ 0.63
SMC4-209ENST00000468653 ST8SIA6P61647 398 aa19■□□□□ 0.63
SMC4-209ENST00000468653 FCHO2Q0JRZ9 810 aa19■□□□□ 0.63
SMC4-209ENST00000468653 GALNT7Q86SF2 657 aa19■□□□□ 0.63
SMC4-209ENST00000468653 LDB1Q86U70 411 aaPredicted RBP19■□□□□ 0.63
SMC4-209ENST00000468653 SLC41A1Q8IVJ1 513 aa19■□□□□ 0.63
SMC4-209ENST00000468653 PLPP6Q8IY26 295 aa19■□□□□ 0.63
SMC4-209ENST00000468653 LRRC8CQ8TDW0 803 aa19■□□□□ 0.63
SMC4-209ENST00000468653 ELMO2Q96JJ3 720 aa19■□□□□ 0.63
SMC4-209ENST00000468653 KXD1Q9BQD3 176 aa19■□□□□ 0.63
SMC4-209ENST00000468653 NSRP1Q9H0G5 558 aaKnown RBP19■□□□□ 0.63
SMC4-209ENST00000468653 TLK1Q9UKI8 766 aa19■□□□□ 0.63
SMC4-209ENST00000468653 PKP3Q9Y446 797 aa19■□□□□ 0.63
SMC4-209ENST00000468653 A0A0J9YYE9 177 aa18.99■□□□□ 0.63
SMC4-209ENST00000468653 ERICH4A6NGS2 130 aa18.99■□□□□ 0.63
SMC4-209ENST00000468653 TOP3BO95985 862 aaKnown RBP18.99■□□□□ 0.63
SMC4-209ENST00000468653 TRBC1P01850 177 aa18.99■□□□□ 0.63
SMC4-209ENST00000468653 DHRS4L1P0CG22 281 aa18.99■□□□□ 0.63
SMC4-209ENST00000468653 NEFHP12036 1026 aa18.99■□□□□ 0.63
SMC4-209ENST00000468653 LAMP2P13473 410 aa18.99■□□□□ 0.63
SMC4-209ENST00000468653 TAC1P20366 129 aa18.99■□□□□ 0.63
SMC4-209ENST00000468653 PSMA3P25788 255 aa18.99■□□□□ 0.63
SMC4-209ENST00000468653 MTHFRP42898 656 aa18.99■□□□□ 0.63
SMC4-209ENST00000468653 SLC12A2P55011 1212 aa18.99■□□□□ 0.63
SMC4-209ENST00000468653 INSCQ1MX18 579 aa18.99■□□□□ 0.63
SMC4-209ENST00000468653 GAB4Q2WGN9 574 aa18.99■□□□□ 0.63
SMC4-209ENST00000468653 FASTKD1Q53R41 847 aaKnown RBP18.99■□□□□ 0.63
SMC4-209ENST00000468653 KYAT3Q6YP21 454 aaKnown RBP18.99■□□□□ 0.63
SMC4-209ENST00000468653 LYSMD3Q7Z3D4 306 aa18.99■□□□□ 0.63
SMC4-209ENST00000468653 CHST14Q8NCH0 376 aa18.99■□□□□ 0.63
SMC4-209ENST00000468653 ARMC2Q8NEN0 867 aa18.99■□□□□ 0.63
SMC4-209ENST00000468653 OR2A12Q8NGT7 310 aa18.99■□□□□ 0.63
SMC4-209ENST00000468653 ZNF641Q96N77 438 aaPredicted RBP18.99■□□□□ 0.63
SMC4-209ENST00000468653 PLA2G2FQ9BZM2 168 aa18.99■□□□□ 0.63
SMC4-209ENST00000468653 BPIFA1Q9NP55 256 aa18.99■□□□□ 0.63
SMC4-209ENST00000468653 ELOVL2Q9NXB9 296 aa18.99■□□□□ 0.63
SMC4-209ENST00000468653 PHTF1Q9UMS5 762 aa18.99■□□□□ 0.63
SMC4-209ENST00000468653 PLA2G4CQ9UP65 541 aa18.99■□□□□ 0.63
SMC4-209ENST00000468653 A0A0U1RQS6 177 aa18.98■□□□□ 0.63
SMC4-209ENST00000468653 S1PR4O95977 384 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms