RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 MTCH2Q9Y6C9 303 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 NLRC5Q86WI3 1866 aa4.2□□□□□ -1.74
TMEM39A-204ENST00000468545 A0A0A6YYJ9 748 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 TRAV19A0A0A6YYK7 116 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 FAM92AA1XBS5 289 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 MIF4GDA9UHW6 222 aaKnown RBP4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 ZNF197O14709 1029 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 IRAK2O43187 625 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 COCHO43405 550 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 PSTPIP1O43586 416 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 TSPAN3O60637 253 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 TRIM13O60858 407 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 OPHN1O60890 802 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 ENDOD1O94919 500 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 APOEP02649 317 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 FGGP02679 453 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 KRT7P08729 469 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 HNRNPA1P09651 372 aaKnown RBP eCLIP4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 ZDHHC11BP0C7U3 371 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 CEBPBP17676 345 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 TCP1P17987 556 aaKnown RBP4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 SP100P23497 879 aaPredicted RBP4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 CCR1P32246 355 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 CTNNA1P35221 906 aaKnown RBP4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 ADRA1BP35368 520 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 PCK1P35558 622 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 CCR2P41597 374 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 PPP3CCP48454 512 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 HARS2P49590 506 aaKnown RBP4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 CXCR3P49682 368 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 PEX5P50542 639 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 MRPS25P82663 173 aaKnown RBP4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 COG7P83436 770 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 SLC25A11Q02978 314 aaKnown RBP4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 ADAM15Q13444 863 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 SNX1Q13596 522 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 EIF4HQ15056 248 aaKnown RBP4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 PDCD1Q15116 288 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 KCTD19Q17RG1 926 aaPredicted RBP4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 ATAT1Q5SQI0 421 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 OTUD1Q5VV17 481 aaPredicted RBP4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 RAP1GAP2Q684P5 730 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 CES5AQ6NT32 575 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 RWDD4Q6NW29 188 aaKnown RBP4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 ANKRD54Q6NXT1 300 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 C1orf228Q6PIY5 440 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 LCNL1Q6ZST4 164 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 B4GALNT4Q76KP1 1039 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 GET4Q7L5D6 327 aaPredicted RBP4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 ARCQ7LC44 396 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 STRADAQ7RTN6 431 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 ANKS1BQ7Z6G8 1248 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 C14orf80Q86SX3 495 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 TMEM150AQ86TG1 271 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 TMC8Q8IU68 726 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 DENND1CQ8IV53 801 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 MAP7D3Q8IWC1 876 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 CCDC33Q8N5R6 958 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 NIPA2Q8N8Q9 360 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 ATP6V0D2Q8N8Y2 350 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 MNS1Q8NEH6 495 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 ITFG1Q8TB96 612 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 OVCA2Q8WZ82 227 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 CENPIQ92674 756 aaPredicted RBP4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 CD101Q93033 1021 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 WBP2Q969T9 261 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 ZNF707Q96C28 371 aaPredicted RBP4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 HAUS1Q96CS2 278 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 AJUBAQ96IF1 538 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 RBM41Q96IZ5 413 aaKnown RBP4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 CEP295NLQ96MC4 621 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 SERPINB11Q96P15 392 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 SLC22A12Q96S37 553 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 CDK5RAP1Q96SZ6 601 aaKnown RBP4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 CDCA3Q99618 268 aaPredicted RBP4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 NCAPGQ9BPX3 1015 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 FAM118BQ9BPY3 351 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 CARD6Q9BX69 1037 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 AP1M1Q9BXS5 423 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 SLC46A2Q9BY10 475 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 MTG2Q9H4K7 406 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 SFXN1Q9H9B4 322 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 ANLNQ9NQW6 1124 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 OLA1Q9NTK5 396 aaKnown RBP4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 C14orf119Q9NWQ9 140 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 ZDHHC7Q9NXF8 308 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 CLIC5Q9NZA1 410 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 XPO7Q9UIA9 1087 aaKnown RBP4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 CDC23Q9UJX2 597 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 ADAM29Q9UKF5 820 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 FZD10Q9ULW2 581 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 SH3BP1Q9Y3L3 701 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 CPQQ9Y646 472 aa4.19□□□□□ -1.74
TMEM39A-204ENST00000468545 PLXNA3P51805 1871 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 A0A1W2PPC1 479 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 TCRBV7S2A1N4TA0A589 114 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 PRSS38A1L453 326 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms