RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 SCYL2Q6P3W7 929 aa13.13□□□□□ -0.31
PTPN7-207ENST00000468385 LIPIQ6XZB0 460 aa13.13□□□□□ -0.31
PTPN7-207ENST00000468385 C17orf82Q86X59 251 aaPredicted RBP13.13□□□□□ -0.31
PTPN7-207ENST00000468385 PHF13Q86YI8 300 aaPredicted RBP13.13□□□□□ -0.31
PTPN7-207ENST00000468385 PELI3Q8N2H9 469 aa13.13□□□□□ -0.31
PTPN7-207ENST00000468385 ECHDC3Q96DC8 303 aa13.13□□□□□ -0.31
PTPN7-207ENST00000468385 B3GNT4Q9C0J1 378 aa13.13□□□□□ -0.31
PTPN7-207ENST00000468385 RDH14Q9HBH5 336 aa13.13□□□□□ -0.31
PTPN7-207ENST00000468385 CYP4F12Q9HCS2 524 aa13.13□□□□□ -0.31
PTPN7-207ENST00000468385 EPHB6O15197 1021 aa13.12□□□□□ -0.31
PTPN7-207ENST00000468385 FGF10O15520 208 aaPredicted RBP13.12□□□□□ -0.31
PTPN7-207ENST00000468385 PPFIA2O75334 1257 aa13.12□□□□□ -0.31
PTPN7-207ENST00000468385 CPNE6O95741 557 aa13.12□□□□□ -0.31
PTPN7-207ENST00000468385 ELFN1P0C7U0 828 aa13.12□□□□□ -0.31
PTPN7-207ENST00000468385 KELP23276 732 aa13.12□□□□□ -0.31
PTPN7-207ENST00000468385 SERPINA4P29622 427 aa13.12□□□□□ -0.31
PTPN7-207ENST00000468385 NSFP46459 744 aaKnown RBP13.12□□□□□ -0.31
PTPN7-207ENST00000468385 CSNK1DP48730 415 aa13.12□□□□□ -0.31
PTPN7-207ENST00000468385 ARSDP51689 593 aa13.12□□□□□ -0.31
PTPN7-207ENST00000468385 ZNF143P52747 638 aaPredicted RBP13.12□□□□□ -0.31
PTPN7-207ENST00000468385 MAZP56270 477 aaKnown RBP13.12□□□□□ -0.31
PTPN7-207ENST00000468385 OR1D5P58170 312 aa13.12□□□□□ -0.31
PTPN7-207ENST00000468385 POLR2FP61218 127 aaKnown RBP13.12□□□□□ -0.31
PTPN7-207ENST00000468385 NR1D2Q14995 579 aa13.12□□□□□ -0.31
PTPN7-207ENST00000468385 CLEC16AQ2KHT3 1053 aa13.12□□□□□ -0.31
PTPN7-207ENST00000468385 MAP9Q49MG5 647 aa13.12□□□□□ -0.31
PTPN7-207ENST00000468385 AFMIDQ63HM1 303 aa13.12□□□□□ -0.31
PTPN7-207ENST00000468385 ZNF574Q6ZN55 896 aaPredicted RBP13.12□□□□□ -0.31
PTPN7-207ENST00000468385 ZNF438Q7Z4V0 828 aa13.12□□□□□ -0.31
PTPN7-207ENST00000468385 SRLQ86TD4 932 aa13.12□□□□□ -0.31
PTPN7-207ENST00000468385 PIM3Q86V86 326 aa13.12□□□□□ -0.31
PTPN7-207ENST00000468385 NRROSQ86YC3 692 aa13.12□□□□□ -0.31
PTPN7-207ENST00000468385 TSEN2Q8NCE0 465 aaKnown RBP13.12□□□□□ -0.31
PTPN7-207ENST00000468385 CELF6Q96J87 481 aaKnown RBP13.12□□□□□ -0.31
PTPN7-207ENST00000468385 NSMCE3Q96MG7 304 aa13.12□□□□□ -0.31
PTPN7-207ENST00000468385 SLC39A8Q9C0K1 460 aa13.12□□□□□ -0.31
PTPN7-207ENST00000468385 SLC25A18Q9H1K4 315 aa13.12□□□□□ -0.31
PTPN7-207ENST00000468385 ATP13A3Q9H7F0 1226 aa13.12□□□□□ -0.31
PTPN7-207ENST00000468385 NLRC4Q9NPP4 1024 aa13.12□□□□□ -0.31
PTPN7-207ENST00000468385 SPATS2LQ9NUQ6 558 aaKnown RBP13.12□□□□□ -0.31
PTPN7-207ENST00000468385 GEMIN8Q9NWZ8 242 aaKnown RBP13.12□□□□□ -0.31
PTPN7-207ENST00000468385 TAB2Q9NYJ8 693 aa13.12□□□□□ -0.31
PTPN7-207ENST00000468385 SPENQ96T58 3664 aaKnown RBP13.12□□□□□ -0.31
PTPN7-207ENST00000468385 UBR5O95071 2799 aaPredicted RBP13.11□□□□□ -0.31
PTPN7-207ENST00000468385 SPTA1P02549 2419 aa13.11□□□□□ -0.31
PTPN7-207ENST00000468385 NAV2Q8IVL1 2488 aa13.11□□□□□ -0.31
PTPN7-207ENST00000468385 PRSS38A1L453 326 aa13.11□□□□□ -0.31
PTPN7-207ENST00000468385 TRAFD1O14545 582 aaPredicted RBP13.11□□□□□ -0.31
PTPN7-207ENST00000468385 FGF1P05230 155 aa13.11□□□□□ -0.31
PTPN7-207ENST00000468385 CALB1P05937 261 aa13.11□□□□□ -0.31
PTPN7-207ENST00000468385 CCNB1P14635 433 aa13.11□□□□□ -0.31
PTPN7-207ENST00000468385 EEF1GP26641 437 aaKnown RBP13.11□□□□□ -0.31
PTPN7-207ENST00000468385 STAT1P42224 750 aa13.11□□□□□ -0.31
PTPN7-207ENST00000468385 PAPOLAP51003 745 aaKnown RBP13.11□□□□□ -0.31
PTPN7-207ENST00000468385 NDST2P52849 883 aa13.11□□□□□ -0.31
PTPN7-207ENST00000468385 AIF1P55008 147 aa13.11□□□□□ -0.31
PTPN7-207ENST00000468385 TPI1P60174 286 aa13.11□□□□□ -0.31
PTPN7-207ENST00000468385 RPL7AP62424 266 aaKnown RBP13.11□□□□□ -0.31
PTPN7-207ENST00000468385 AMZ1Q400G9 498 aa13.11□□□□□ -0.31
PTPN7-207ENST00000468385 TMEM164Q5U3C3 297 aa13.11□□□□□ -0.31
PTPN7-207ENST00000468385 PNCKQ6P2M8 343 aa13.11□□□□□ -0.31
PTPN7-207ENST00000468385 DPPA4Q7L190 304 aa13.11□□□□□ -0.31
PTPN7-207ENST00000468385 MON1BQ7L1V2 547 aa13.11□□□□□ -0.31
PTPN7-207ENST00000468385 RCBTB1Q8NDN9 531 aa13.11□□□□□ -0.31
PTPN7-207ENST00000468385 KIAA1524Q8TCG1 905 aa13.11□□□□□ -0.31
PTPN7-207ENST00000468385 GPBAR1Q8TDU6 330 aa13.11□□□□□ -0.31
PTPN7-207ENST00000468385 JPH3Q8WXH2 748 aaPredicted RBP13.11□□□□□ -0.31
PTPN7-207ENST00000468385 PMEPA1Q969W9 287 aa13.11□□□□□ -0.31
PTPN7-207ENST00000468385 MCEEQ96PE7 176 aa13.11□□□□□ -0.31
PTPN7-207ENST00000468385 NUDT22Q9BRQ3 303 aa13.11□□□□□ -0.31
PTPN7-207ENST00000468385 SLC12A9Q9BXP2 914 aa13.11□□□□□ -0.31
PTPN7-207ENST00000468385 WDR26Q9H7D7 661 aa13.11□□□□□ -0.31
PTPN7-207ENST00000468385 FAM207AQ9NSI2 230 aaPredicted RBP13.11□□□□□ -0.31
PTPN7-207ENST00000468385 MOSPD1Q9UJG1 213 aa13.11□□□□□ -0.31
PTPN7-207ENST00000468385 RELNP78509 3460 aa13.11□□□□□ -0.31
PTPN7-207ENST00000468385 COL12A1Q99715 3063 aa13.11□□□□□ -0.31
PTPN7-207ENST00000468385 NBPF19A0A087WUL8 3843 aa13.1□□□□□ -0.31
PTPN7-207ENST00000468385 IGHV5-10-1A0A0J9YXX1 117 aa13.1□□□□□ -0.31
PTPN7-207ENST00000468385 STMND1H3BQB6 276 aa13.1□□□□□ -0.31
PTPN7-207ENST00000468385 HGSO14964 777 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-207ENST00000468385 TEX33O43247 280 aa13.1□□□□□ -0.31
PTPN7-207ENST00000468385 PALMO75781 387 aa13.1□□□□□ -0.31
PTPN7-207ENST00000468385 FUCA1P04066 466 aa13.1□□□□□ -0.31
PTPN7-207ENST00000468385 FGF3P11487 239 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-207ENST00000468385 HTR7P34969 479 aa13.1□□□□□ -0.31
PTPN7-207ENST00000468385 TLE1Q04724 770 aa13.1□□□□□ -0.31
PTPN7-207ENST00000468385 BCL2L1Q07817 233 aa13.1□□□□□ -0.31
PTPN7-207ENST00000468385 CLPPQ16740 277 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-207ENST00000468385 TSR1Q2NL82 804 aaKnown RBP13.1□□□□□ -0.31
PTPN7-207ENST00000468385 PPP1R15BQ5SWA1 713 aa13.1□□□□□ -0.31
PTPN7-207ENST00000468385 DNAJC24Q6P3W2 148 aa13.1□□□□□ -0.31
PTPN7-207ENST00000468385 ZDHHC1Q8WTX9 485 aa13.1□□□□□ -0.31
PTPN7-207ENST00000468385 NKD1Q969G9 470 aa13.1□□□□□ -0.31
PTPN7-207ENST00000468385 VPS16Q9H269 839 aa13.1□□□□□ -0.31
PTPN7-207ENST00000468385 CLSTN2Q9H4D0 955 aa13.1□□□□□ -0.31
PTPN7-207ENST00000468385 CARS2Q9HA77 564 aaKnown RBP13.1□□□□□ -0.31
PTPN7-207ENST00000468385 GPATCH2LQ9NWQ4 482 aa13.1□□□□□ -0.31
PTPN7-207ENST00000468385 AKAP7Q9P0M2 348 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-207ENST00000468385 DACH1Q9UI36 760 aa13.1□□□□□ -0.31
PTPN7-207ENST00000468385 PCDHGA3Q9Y5H0 932 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms