RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 CFAP46Q8IYW2 2715 aa24.56■■□□□ 1.52
PTCH1-210ENST00000468211 A0A1W2PQM1 296 aa24.56■■□□□ 1.52
PTCH1-210ENST00000468211 KLK10O43240 276 aa24.56■■□□□ 1.52
PTCH1-210ENST00000468211 MYBL1P10243 752 aa24.56■■□□□ 1.52
PTCH1-210ENST00000468211 RARAP10276 462 aa24.56■■□□□ 1.52
PTCH1-210ENST00000468211 CR2P20023 1033 aa24.56■■□□□ 1.52
PTCH1-210ENST00000468211 RBMS1P29558 406 aaKnown RBP24.56■■□□□ 1.52
PTCH1-210ENST00000468211 RENBPP51606 427 aa24.56■■□□□ 1.52
PTCH1-210ENST00000468211 POLR2LP62875 67 aaKnown RBP24.56■■□□□ 1.52
PTCH1-210ENST00000468211 CCL7P80098 99 aa24.56■■□□□ 1.52
PTCH1-210ENST00000468211 SKOR1P84550 965 aa24.56■■□□□ 1.52
PTCH1-210ENST00000468211 PTPRRQ15256 657 aa24.56■■□□□ 1.52
PTCH1-210ENST00000468211 SDR16C5Q8N3Y7 309 aa24.56■■□□□ 1.52
PTCH1-210ENST00000468211 OR56A4Q8NGH8 313 aa24.56■■□□□ 1.52
PTCH1-210ENST00000468211 TRIM11Q96F44 468 aa24.56■■□□□ 1.52
PTCH1-210ENST00000468211 ZNF599Q96NL3 588 aa24.56■■□□□ 1.52
PTCH1-210ENST00000468211 CSPG4P5Q96PW8 444 aa24.56■■□□□ 1.52
PTCH1-210ENST00000468211 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.56■■□□□ 1.52
PTCH1-210ENST00000468211 TEX51A0A1B0GUA7 166 aa24.55■■□□□ 1.52
PTCH1-210ENST00000468211 CDRT15L2A8MXV6 281 aa24.55■■□□□ 1.52
PTCH1-210ENST00000468211 HTRA2O43464 458 aaPredicted RBP24.55■■□□□ 1.52
PTCH1-210ENST00000468211 MAFKO60675 156 aa24.55■■□□□ 1.52
PTCH1-210ENST00000468211 SERPINC1P01008 464 aa24.55■■□□□ 1.52
PTCH1-210ENST00000468211 TRIM23P36406 574 aa24.55■■□□□ 1.52
PTCH1-210ENST00000468211 ACOX1Q15067 660 aa24.55■■□□□ 1.52
PTCH1-210ENST00000468211 GPR156Q8NFN8 814 aa24.55■■□□□ 1.52
PTCH1-210ENST00000468211 ATL2Q8NHH9 583 aa24.55■■□□□ 1.52
PTCH1-210ENST00000468211 CCL4L1Q8NHW4 92 aa24.55■■□□□ 1.52
PTCH1-210ENST00000468211 WDR48Q8TAF3 677 aa24.55■■□□□ 1.52
PTCH1-210ENST00000468211 COQ10AQ96MF6 247 aa24.55■■□□□ 1.52
PTCH1-210ENST00000468211 TMEM168Q9H0V1 697 aa24.55■■□□□ 1.52
PTCH1-210ENST00000468211 CACNB4O00305 520 aaPredicted RBP24.54■■□□□ 1.52
PTCH1-210ENST00000468211 ARL4AP40617 200 aa24.54■■□□□ 1.52
PTCH1-210ENST00000468211 ZNF235Q14590 738 aa24.54■■□□□ 1.52
PTCH1-210ENST00000468211 CNGA3Q16281 694 aa24.54■■□□□ 1.52
PTCH1-210ENST00000468211 BOLA3Q53S33 107 aa24.54■■□□□ 1.52
PTCH1-210ENST00000468211 FIGNQ5HY92 759 aa24.54■■□□□ 1.52
PTCH1-210ENST00000468211 PNCKQ6P2M8 343 aa24.54■■□□□ 1.52
PTCH1-210ENST00000468211 TMCO3Q6UWJ1 677 aa24.54■■□□□ 1.52
PTCH1-210ENST00000468211 WDR36Q8NI36 951 aaKnown RBP24.54■■□□□ 1.52
PTCH1-210ENST00000468211 SPOCK2Q92563 424 aa24.54■■□□□ 1.52
PTCH1-210ENST00000468211 NUDCD1Q96RS6 583 aa24.54■■□□□ 1.52
PTCH1-210ENST00000468211 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.54■■□□□ 1.52
PTCH1-210ENST00000468211 FOXP3Q9BZS1 431 aa24.54■■□□□ 1.52
PTCH1-210ENST00000468211 THAP2Q9H0W7 228 aa24.54■■□□□ 1.52
PTCH1-210ENST00000468211 NOD2Q9HC29 1040 aa24.54■■□□□ 1.52
PTCH1-210ENST00000468211 PCDH18Q9HCL0 1135 aa24.54■■□□□ 1.52
PTCH1-210ENST00000468211 SSUH2Q9Y2M2 353 aa24.54■■□□□ 1.52
PTCH1-210ENST00000468211 HELZ2Q9BYK8 2649 aaKnown RBP24.53■■□□□ 1.52
PTCH1-210ENST00000468211 CCDC187A0A096LP49 1063 aa24.53■■□□□ 1.52
PTCH1-210ENST00000468211 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP24.53■■□□□ 1.52
PTCH1-210ENST00000468211 TK2O00142 265 aa24.53■■□□□ 1.52
PTCH1-210ENST00000468211 NOBOXO60393 691 aa24.53■■□□□ 1.52
PTCH1-210ENST00000468211 TNFSF15O95150 251 aa24.53■■□□□ 1.52
PTCH1-210ENST00000468211 RPLP0P05388 317 aaKnown RBP24.53■■□□□ 1.52
PTCH1-210ENST00000468211 HOXC4P09017 264 aaPredicted RBP24.53■■□□□ 1.52
PTCH1-210ENST00000468211 PBX1P40424 430 aa24.53■■□□□ 1.52
PTCH1-210ENST00000468211 TMPRSS3P57727 454 aa24.53■■□□□ 1.52
PTCH1-210ENST00000468211 MAXP61244 160 aa24.53■■□□□ 1.52
PTCH1-210ENST00000468211 SLC25A11Q02978 314 aaKnown RBP24.53■■□□□ 1.52
PTCH1-210ENST00000468211 TRAF2Q12933 501 aa24.53■■□□□ 1.52
PTCH1-210ENST00000468211 TDRD12Q587J7 1177 aaKnown RBP24.53■■□□□ 1.52
PTCH1-210ENST00000468211 ARHGAP40Q5TG30 622 aa24.53■■□□□ 1.52
PTCH1-210ENST00000468211 OGFOD3Q6PK18 319 aa24.53■■□□□ 1.52
PTCH1-210ENST00000468211 TAF8Q7Z7C8 310 aa24.53■■□□□ 1.52
PTCH1-210ENST00000468211 PDCD6IPQ8WUM4 868 aaKnown RBP24.53■■□□□ 1.52
PTCH1-210ENST00000468211 GFM1Q96RP9 751 aaKnown RBP24.53■■□□□ 1.52
PTCH1-210ENST00000468211 CYP4F12Q9HCS2 524 aa24.53■■□□□ 1.52
PTCH1-210ENST00000468211 D6RAR5 112 aa24.52■■□□□ 1.52
PTCH1-210ENST00000468211 FUCA1P04066 466 aa24.52■■□□□ 1.52
PTCH1-210ENST00000468211 LHCGRP22888 699 aa24.52■■□□□ 1.52
PTCH1-210ENST00000468211 BROXQ5VW32 411 aa24.52■■□□□ 1.52
PTCH1-210ENST00000468211 CLEC14AQ86T13 490 aa24.52■■□□□ 1.52
PTCH1-210ENST00000468211 CBARPQ8N350 705 aaPredicted RBP24.52■■□□□ 1.52
PTCH1-210ENST00000468211 FAM46DQ8NEK8 389 aa24.52■■□□□ 1.52
PTCH1-210ENST00000468211 LIN37Q96GY3 246 aaPredicted RBP24.52■■□□□ 1.52
PTCH1-210ENST00000468211 MGME1Q9BQP7 344 aa24.52■■□□□ 1.52
PTCH1-210ENST00000468211 DPH1Q9BZG8 443 aa24.52■■□□□ 1.52
PTCH1-210ENST00000468211 WDR26Q9H7D7 661 aa24.52■■□□□ 1.52
PTCH1-210ENST00000468211 EPB41L5Q9HCM4 733 aa24.52■■□□□ 1.52
PTCH1-210ENST00000468211 A0A0U1RQS6 177 aa24.51■■□□□ 1.51
PTCH1-210ENST00000468211 TNFRSF10CO14798 259 aa24.51■■□□□ 1.51
PTCH1-210ENST00000468211 SOCS5O75159 536 aa24.51■■□□□ 1.51
PTCH1-210ENST00000468211 HEXIM1O94992 359 aaKnown RBP24.51■■□□□ 1.51
PTCH1-210ENST00000468211 CPP00450 1065 aa24.51■■□□□ 1.51
PTCH1-210ENST00000468211 IL4RP24394 825 aa24.51■■□□□ 1.51
PTCH1-210ENST00000468211 HSPA9P38646 679 aaKnown RBP24.51■■□□□ 1.51
PTCH1-210ENST00000468211 FANCCQ00597 558 aa24.51■■□□□ 1.51
PTCH1-210ENST00000468211 MMRN1Q13201 1228 aa24.51■■□□□ 1.51
PTCH1-210ENST00000468211 PIGHQ14442 188 aaPredicted RBP24.51■■□□□ 1.51
PTCH1-210ENST00000468211 DENND2CQ68D51 928 aa24.51■■□□□ 1.51
PTCH1-210ENST00000468211 HSD11B1LQ7Z5J1 315 aa24.51■■□□□ 1.51
PTCH1-210ENST00000468211 LUZP1Q86V48 1076 aa24.51■■□□□ 1.51
PTCH1-210ENST00000468211 NIPA2Q8N8Q9 360 aa24.51■■□□□ 1.51
PTCH1-210ENST00000468211 Q8N9G6 341 aaPredicted RBP24.51■■□□□ 1.51
PTCH1-210ENST00000468211 PTCD2Q8WV60 388 aaKnown RBP24.51■■□□□ 1.51
PTCH1-210ENST00000468211 NUS1Q96E22 293 aa24.51■■□□□ 1.51
PTCH1-210ENST00000468211 LRRN3Q9H3W5 708 aa24.51■■□□□ 1.51
PTCH1-210ENST00000468211 CBX8Q9HC52 389 aa24.51■■□□□ 1.51
PTCH1-210ENST00000468211 MOSPD1Q9UJG1 213 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms