RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 SCARB2Q14108 478 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 MAP3K21Q5TCX8 1036 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 CAPRIN2Q6IMN6 1127 aaKnown RBP3.9□□□□□ -1.79
VPS50-209ENST00000467326 CCDC73Q6ZRK6 1079 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 CREB3L2Q70SY1 520 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 MON1AQ86VX9 555 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 CHD1LQ86WJ1 897 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 RPAP2Q8IXW5 612 aaPredicted RBP3.9□□□□□ -1.79
VPS50-209ENST00000467326 ANKRD52Q8NB46 1076 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 TDRD7Q8NHU6 1098 aaKnown RBP3.9□□□□□ -1.79
VPS50-209ENST00000467326 GDPD5Q8WTR4 605 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 TMEM170AQ8WVE7 144 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 CNOT9Q92600 299 aaKnown RBP3.9□□□□□ -1.79
VPS50-209ENST00000467326 HTRA1Q92743 480 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 STAMQ92783 540 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 TXNDC15Q96J42 360 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 CFAP53Q96M91 514 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.9□□□□□ -1.79
VPS50-209ENST00000467326 MSTO1Q9BUK6 570 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 KRTAP2-2Q9BYT5 123 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 TXLNGYQ9BZA5 131 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 ABCG4Q9H172 646 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 C6orf106Q9H6K1 298 aaPredicted RBP3.9□□□□□ -1.79
VPS50-209ENST00000467326 PLSCR4Q9NRQ2 329 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 TMEM51Q9NW97 253 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 ALKBH4Q9NXW9 302 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 AGTPBP1Q9UPW5 1226 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 KNSTRNQ9Y448 316 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 IKBKGQ9Y6K9 419 aa3.9□□□□□ -1.79
VPS50-209ENST00000467326 RSF1Q96T23 1441 aaPredicted RBP3.89□□□□□ -1.79
VPS50-209ENST00000467326 EME2A4GXA9 379 aaPredicted RBP3.89□□□□□ -1.79
VPS50-209ENST00000467326 PI4KAP2A4QPH2 592 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 SH2D7A6NKC9 451 aaPredicted RBP3.89□□□□□ -1.79
VPS50-209ENST00000467326 EBAG9O00559 213 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 ACOT8O14734 319 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 CEP104O60308 925 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 B3GALNT1O75752 331 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 ITGB8P26012 769 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 ATP5DP30049 168 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 HPDP32754 393 aaPredicted RBP3.89□□□□□ -1.79
VPS50-209ENST00000467326 MSH2P43246 934 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 TNNT2P45379 298 aaPredicted RBP3.89□□□□□ -1.79
VPS50-209ENST00000467326 CENPAP49450 140 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 TUBP50607 506 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 BLKP51451 505 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 ART1P52961 327 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 CASP6P55212 293 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 CAPSQ13938 189 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 CTTNQ14247 550 aaKnown RBP3.89□□□□□ -1.79
VPS50-209ENST00000467326 IZUMO4Q1ZYL8 232 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 IL20RBQ6UXL0 311 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 C18orf65Q6ZTR6 163 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 RAPH1Q70E73 1250 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.89□□□□□ -1.79
VPS50-209ENST00000467326 RBM23Q86U06 439 aaKnown RBP3.89□□□□□ -1.79
VPS50-209ENST00000467326 UNC45BQ8IWX7 931 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 MCPH1Q8NEM0 835 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 RFWD2Q8NHY2 731 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 RUFY2Q8WXA3 655 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 CENPTQ96BT3 561 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 RRP36Q96EU6 259 aaKnown RBP3.89□□□□□ -1.79
VPS50-209ENST00000467326 FAM84BQ96KN1 310 aaPredicted RBP3.89□□□□□ -1.79
VPS50-209ENST00000467326 JAKMIP1Q96N16 626 aaKnown RBP3.89□□□□□ -1.79
VPS50-209ENST00000467326 YME1L1Q96TA2 773 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 CD180Q99467 661 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 CLSTN3Q9BQT9 956 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 REEP2Q9BRK0 252 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 GHITMQ9H3K2 345 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 CLK4Q9HAZ1 481 aaKnown RBP3.89□□□□□ -1.79
VPS50-209ENST00000467326 SPATS2LQ9NUQ6 558 aaKnown RBP3.89□□□□□ -1.79
VPS50-209ENST00000467326 WDR35Q9P2L0 1181 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 ZNF112Q9UJU3 913 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 ARHGAP26Q9UNA1 814 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 RABL2BQ9UNT1 228 aa3.89□□□□□ -1.79
VPS50-209ENST00000467326 EVPLQ92817 2033 aa3.88□□□□□ -1.79
VPS50-209ENST00000467326 C17orf113A0A1B0GUU1 675 aa3.88□□□□□ -1.79
VPS50-209ENST00000467326 TIMM23O14925 209 aa3.88□□□□□ -1.79
VPS50-209ENST00000467326 DOK2O60496 412 aa3.88□□□□□ -1.79
VPS50-209ENST00000467326 SERPINI2O75830 405 aa3.88□□□□□ -1.79
VPS50-209ENST00000467326 TSPAN9O75954 239 aa3.88□□□□□ -1.79
VPS50-209ENST00000467326 MYF6P23409 242 aa3.88□□□□□ -1.79
VPS50-209ENST00000467326 TTKP33981 857 aa3.88□□□□□ -1.79
VPS50-209ENST00000467326 MXI1P50539 228 aa3.88□□□□□ -1.79
VPS50-209ENST00000467326 ZNF132P52740 706 aa3.88□□□□□ -1.79
VPS50-209ENST00000467326 NR1H2P55055 460 aa3.88□□□□□ -1.79
VPS50-209ENST00000467326 UBXN1Q04323 297 aa3.88□□□□□ -1.79
VPS50-209ENST00000467326 UBE3AQ05086 875 aa3.88□□□□□ -1.79
VPS50-209ENST00000467326 ST3GAL1Q11201 340 aa3.88□□□□□ -1.79
VPS50-209ENST00000467326 LPIN1Q14693 890 aa3.88□□□□□ -1.79
VPS50-209ENST00000467326 NFATC4Q14934 902 aa3.88□□□□□ -1.79
VPS50-209ENST00000467326 SLMAPQ14BN4 828 aa3.88□□□□□ -1.79
VPS50-209ENST00000467326 NAA25Q14CX7 972 aa3.88□□□□□ -1.79
VPS50-209ENST00000467326 WTAPQ15007 396 aa3.88□□□□□ -1.79
VPS50-209ENST00000467326 RASA2Q15283 850 aa3.88□□□□□ -1.79
VPS50-209ENST00000467326 DCAF6Q58WW2 860 aa3.88□□□□□ -1.79
VPS50-209ENST00000467326 EFHC1Q5JVL4 640 aa3.88□□□□□ -1.79
VPS50-209ENST00000467326 ATG16L1Q676U5 607 aa3.88□□□□□ -1.79
VPS50-209ENST00000467326 GPR139Q6DWJ6 353 aa3.88□□□□□ -1.79
VPS50-209ENST00000467326 PLBD1Q6P4A8 553 aa3.88□□□□□ -1.79
VPS50-209ENST00000467326 CCDC105Q8IYK2 499 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms