RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 ADGRB3O60242 1522 aa3.72□□□□□ -1.81
XRN1-206ENST00000467077 DUOX2Q9NRD8 1548 aa3.72□□□□□ -1.81
XRN1-206ENST00000467077 NPIPB13A6NJU9 1138 aa3.72□□□□□ -1.81
XRN1-206ENST00000467077 NPIPB5A8MRT5 1133 aa3.72□□□□□ -1.81
XRN1-206ENST00000467077 NPIPB4C9JG80 1138 aa3.72□□□□□ -1.81
XRN1-206ENST00000467077 HNRNPRO43390 633 aaKnown RBP3.72□□□□□ -1.81
XRN1-206ENST00000467077 TIPRLO75663 272 aa3.72□□□□□ -1.81
XRN1-206ENST00000467077 IL15P40933 162 aaPredicted RBP3.72□□□□□ -1.81
XRN1-206ENST00000467077 FOXO1Q12778 655 aa3.72□□□□□ -1.81
XRN1-206ENST00000467077 DCTN1Q14203 1278 aa3.72□□□□□ -1.81
XRN1-206ENST00000467077 MTFR2Q6P444 385 aa3.72□□□□□ -1.81
XRN1-206ENST00000467077 RRAGAQ7L523 313 aa3.72□□□□□ -1.81
XRN1-206ENST00000467077 SLC9B2Q86UD5 537 aa3.72□□□□□ -1.81
XRN1-206ENST00000467077 METTL27Q8N6F8 245 aaPredicted RBP3.72□□□□□ -1.81
XRN1-206ENST00000467077 VPS37AQ8NEZ2 397 aa3.72□□□□□ -1.81
XRN1-206ENST00000467077 LNX1Q8TBB1 728 aaPredicted RBP3.72□□□□□ -1.81
XRN1-206ENST00000467077 OTUD7AQ8TE49 926 aaPredicted RBP3.72□□□□□ -1.81
XRN1-206ENST00000467077 HDAC7Q8WUI4 952 aa3.72□□□□□ -1.81
XRN1-206ENST00000467077 TRAPPC9Q96Q05 1148 aa3.72□□□□□ -1.81
XRN1-206ENST00000467077 NPFFR1Q9GZQ6 430 aa3.72□□□□□ -1.81
XRN1-206ENST00000467077 SIX4Q9UIU6 781 aa3.72□□□□□ -1.81
XRN1-206ENST00000467077 NALCNQ8IZF0 1738 aa3.72□□□□□ -1.81
XRN1-206ENST00000467077 BRWD3Q6RI45 1802 aa3.72□□□□□ -1.81
XRN1-206ENST00000467077 CEP162Q5TB80 1403 aa3.71□□□□□ -1.82
XRN1-206ENST00000467077 LRP5O75197 1615 aa3.71□□□□□ -1.82
XRN1-206ENST00000467077 DDTLA6NHG4 134 aaPredicted RBP3.71□□□□□ -1.82
XRN1-206ENST00000467077 PMS2P5A8MQ11 134 aa3.71□□□□□ -1.82
XRN1-206ENST00000467077 H0Y3Z8 333 aa3.71□□□□□ -1.82
XRN1-206ENST00000467077 DHX16O60231 1041 aaKnown RBP3.71□□□□□ -1.82
XRN1-206ENST00000467077 SP100P23497 879 aaPredicted RBP3.71□□□□□ -1.82
XRN1-206ENST00000467077 CHAF1AQ13111 956 aaPredicted RBP3.71□□□□□ -1.82
XRN1-206ENST00000467077 ALKBH1Q13686 389 aaKnown RBP3.71□□□□□ -1.82
XRN1-206ENST00000467077 IDI1Q13907 227 aa3.71□□□□□ -1.82
XRN1-206ENST00000467077 MORC3Q14149 939 aa3.71□□□□□ -1.82
XRN1-206ENST00000467077 GXYLT1Q4G148 440 aa3.71□□□□□ -1.82
XRN1-206ENST00000467077 CCDC38Q502W7 563 aa3.71□□□□□ -1.82
XRN1-206ENST00000467077 WDR5BQ86VZ2 330 aa3.71□□□□□ -1.82
XRN1-206ENST00000467077 VPS52Q8N1B4 723 aa3.71□□□□□ -1.82
XRN1-206ENST00000467077 PTGR2Q8N8N7 351 aaPredicted RBP3.71□□□□□ -1.82
XRN1-206ENST00000467077 GPT2Q8TD30 523 aa3.71□□□□□ -1.82
XRN1-206ENST00000467077 KCNJ9Q92806 393 aa3.71□□□□□ -1.82
XRN1-206ENST00000467077 MPHOSPH6Q99547 160 aaKnown RBP3.71□□□□□ -1.82
XRN1-206ENST00000467077 TRIM31Q9BZY9 425 aa3.71□□□□□ -1.82
XRN1-206ENST00000467077 LRRC4Q9HBW1 653 aa3.71□□□□□ -1.82
XRN1-206ENST00000467077 TMLHEQ9NVH6 421 aa3.71□□□□□ -1.82
XRN1-206ENST00000467077 GRHPRQ9UBQ7 328 aa3.71□□□□□ -1.82
XRN1-206ENST00000467077 KCND3Q9UK17 655 aa3.71□□□□□ -1.82
XRN1-206ENST00000467077 BAG5Q9UL15 447 aa3.71□□□□□ -1.82
XRN1-206ENST00000467077 ZNF711Q9Y462 761 aa3.71□□□□□ -1.82
XRN1-206ENST00000467077 GREB1LQ9C091 1923 aaPredicted RBP3.71□□□□□ -1.82
XRN1-206ENST00000467077 MST1RQ04912 1400 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 ARHGAP31Q2M1Z3 1444 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 ASXL1Q8IXJ9 1541 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 TMEM131LA2VDJ0 1609 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 A0A0G2JPF8 293 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 hDV102S1A0JD36 115 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 FAM90A20PA6NIJ5 464 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 HNRNPCL3B7ZW38 293 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 HNRNPCL1O60812 293 aaKnown RBP3.7□□□□□ -1.82
XRN1-206ENST00000467077 VNN2O95498 520 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 HNRNPCL4P0DMR1 293 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 SRCP12931 536 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 LYL1P12980 280 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 CHN1P15882 459 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 GSTM2P28161 218 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 FUT6P51993 359 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 RHBDL3P58872 404 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 PDCLQ13371 301 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 TRIM14Q14142 442 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 DCAF6Q58WW2 860 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 FAM69BQ5VUD6 431 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 SYNE3Q6ZMZ3 975 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 RNF144BQ7Z419 303 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 TMC8Q8IU68 726 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 SCN4BQ8IWT1 228 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 AADATQ8N5Z0 425 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 C2CD4CQ8TF44 421 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 TBC1D22AQ8WUA7 517 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 LTV1Q96GA3 475 aaPredicted RBP3.7□□□□□ -1.82
XRN1-206ENST00000467077 CLPBQ9H078 707 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.7□□□□□ -1.82
XRN1-206ENST00000467077 SNX9Q9Y5X1 595 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 KANK1Q14678 1352 aa3.7□□□□□ -1.82
XRN1-206ENST00000467077 A0A1W2PS18 150 aa3.69□□□□□ -1.82
XRN1-206ENST00000467077 HMX3A6NHT5 357 aa3.69□□□□□ -1.82
XRN1-206ENST00000467077 LILRA5A6NI73 299 aa3.69□□□□□ -1.82
XRN1-206ENST00000467077 E7EVH7 732 aa3.69□□□□□ -1.82
XRN1-206ENST00000467077 CHL1O00533 1208 aa3.69□□□□□ -1.82
XRN1-206ENST00000467077 CLDN14O95500 239 aa3.69□□□□□ -1.82
XRN1-206ENST00000467077 LINC00271P0C7V0 271 aa3.69□□□□□ -1.82
XRN1-206ENST00000467077 DHRS4L1P0CG22 281 aa3.69□□□□□ -1.82
XRN1-206ENST00000467077 FCGR2AP12318 317 aa3.69□□□□□ -1.82
XRN1-206ENST00000467077 ACP5P13686 325 aa3.69□□□□□ -1.82
XRN1-206ENST00000467077 CST5P28325 142 aaPredicted RBP3.69□□□□□ -1.82
XRN1-206ENST00000467077 FMO5P49326 533 aa3.69□□□□□ -1.82
XRN1-206ENST00000467077 SMAD1Q15797 465 aaKnown RBP3.69□□□□□ -1.82
XRN1-206ENST00000467077 TUBB8Q3ZCM7 444 aa3.69□□□□□ -1.82
XRN1-206ENST00000467077 LRRC24Q50LG9 513 aa3.69□□□□□ -1.82
XRN1-206ENST00000467077 TMEM268Q5VZI3 342 aa3.69□□□□□ -1.82
XRN1-206ENST00000467077 BRINP3Q76B58 766 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms