RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 BTN2A3PQ96KV6 586 aa16.4■□□□□ 0.22
SLX4-202ENST00000466154 BPIFA1Q9NP55 256 aa16.4■□□□□ 0.22
SLX4-202ENST00000466154 PCDHGB4Q9UN71 923 aa16.4■□□□□ 0.22
SLX4-202ENST00000466154 PSMD13Q9UNM6 376 aa16.4■□□□□ 0.22
SLX4-202ENST00000466154 PCDHGB5Q9Y5G0 923 aa16.4■□□□□ 0.22
SLX4-202ENST00000466154 ANKRD12Q6UB98 2062 aa16.4■□□□□ 0.22
SLX4-202ENST00000466154 CCDC162PA2VCL2 907 aa16.39■□□□□ 0.21
SLX4-202ENST00000466154 UBFD1O14562 309 aaKnown RBP16.39■□□□□ 0.21
SLX4-202ENST00000466154 TLR5O60602 858 aa16.39■□□□□ 0.21
SLX4-202ENST00000466154 RBP1P09455 135 aa16.39■□□□□ 0.21
SLX4-202ENST00000466154 NELFEP18615 380 aaKnown RBP16.39■□□□□ 0.21
SLX4-202ENST00000466154 PIGGQ5H8A4 983 aa16.39■□□□□ 0.21
SLX4-202ENST00000466154 RARS2Q5T160 578 aaKnown RBP16.39■□□□□ 0.21
SLX4-202ENST00000466154 C6orf52Q5T4I8 152 aa16.39■□□□□ 0.21
SLX4-202ENST00000466154 TRPC4APQ8TEL6 797 aa16.39■□□□□ 0.21
SLX4-202ENST00000466154 KLHL32Q96NJ5 620 aa16.39■□□□□ 0.21
SLX4-202ENST00000466154 NR1H4Q96RI1 486 aaPredicted RBP16.39■□□□□ 0.21
SLX4-202ENST00000466154 PKP2Q99959 881 aa16.39■□□□□ 0.21
SLX4-202ENST00000466154 PAPOLBQ9NRJ5 636 aaKnown RBP16.39■□□□□ 0.21
SLX4-202ENST00000466154 SUPT3HB4E1H0 165 aa16.39■□□□□ 0.21
SLX4-202ENST00000466154 NR5A2O00482 541 aa16.39■□□□□ 0.21
SLX4-202ENST00000466154 CD3EAPO15446 510 aaKnown RBP16.39■□□□□ 0.21
SLX4-202ENST00000466154 NPHS1O60500 1241 aa16.39■□□□□ 0.21
SLX4-202ENST00000466154 SUPT3HO75486 399 aa16.39■□□□□ 0.21
SLX4-202ENST00000466154 S1PR4O95977 384 aa16.39■□□□□ 0.21
SLX4-202ENST00000466154 RPS24P62847 133 aaKnown RBP16.39■□□□□ 0.21
SLX4-202ENST00000466154 ECT2LQ008S8 904 aa16.39■□□□□ 0.21
SLX4-202ENST00000466154 CAP1Q01518 475 aa16.39■□□□□ 0.21
SLX4-202ENST00000466154 GSTA3Q16772 222 aa16.39■□□□□ 0.21
SLX4-202ENST00000466154 RNF19BQ6ZMZ0 732 aa16.39■□□□□ 0.21
SLX4-202ENST00000466154 C16orf59Q7L2K0 433 aa16.39■□□□□ 0.21
SLX4-202ENST00000466154 SETD3Q86TU7 594 aaPredicted RBP16.39■□□□□ 0.21
SLX4-202ENST00000466154 UMODL1-AS1Q8N2C9 162 aa16.39■□□□□ 0.21
SLX4-202ENST00000466154 ZNF512Q96ME7 567 aaPredicted RBP16.39■□□□□ 0.21
SLX4-202ENST00000466154 POLR1EQ9GZS1 481 aaKnown RBP16.39■□□□□ 0.21
SLX4-202ENST00000466154 PRPF19Q9UMS4 504 aaKnown RBP16.39■□□□□ 0.21
SLX4-202ENST00000466154 PEX1O43933 1283 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 CAPN15O75808 1086 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 LEPRP48357 1165 aaKnown RBP16.38■□□□□ 0.21
SLX4-202ENST00000466154 SEMA3AQ14563 771 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 PRSS55Q6UWB4 352 aaPredicted RBP16.38■□□□□ 0.21
SLX4-202ENST00000466154 ZNF598Q86UK7 904 aaKnown RBP16.38■□□□□ 0.21
SLX4-202ENST00000466154 EGFL6Q8IUX8 553 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 C3orf30Q96M34 536 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 CCDC28BQ9BUN5 200 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 SEMA4BQ9NPR2 832 aaPredicted RBP16.38■□□□□ 0.21
SLX4-202ENST00000466154 TLR8Q9NR97 1041 aaKnown RBP16.38■□□□□ 0.21
SLX4-202ENST00000466154 UTP6Q9NYH9 597 aaKnown RBP16.38■□□□□ 0.21
SLX4-202ENST00000466154 PDP2Q9P2J9 529 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 NDST2P52849 883 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 STX1BP61266 288 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 IRF5Q13568 498 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 MBTPS1Q14703 1052 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 RPS6KA2Q15349 733 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 SLC39A13Q96H72 371 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 CCDC68Q9H2F9 335 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 TMEM248Q9NWD8 314 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 EPS15L1Q9UBC2 864 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 SNX13Q9Y5W8 968 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 TDRD15B5MCY1 1934 aaKnown RBP16.38■□□□□ 0.21
SLX4-202ENST00000466154 CBX4O00257 560 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 MRASO14807 208 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 TPST1O60507 370 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 RHOBTB1O94844 696 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 PFKPQ01813 784 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 IL23RQ5VWK5 629 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 REP15Q6BDI9 236 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 SLC30A9Q6PML9 568 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 AMIGO2Q86SJ2 522 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 COLGALT2Q8IYK4 626 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 LILRA2Q8N149 483 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 EME1Q96AY2 570 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 GLT1D1Q96MS3 346 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 SPATS2LQ9NUQ6 558 aaKnown RBP16.38■□□□□ 0.21
SLX4-202ENST00000466154 COMMD10Q9Y6G5 202 aa16.38■□□□□ 0.21
SLX4-202ENST00000466154 NYNRINQ9P2P1 1898 aaKnown RBP16.37■□□□□ 0.21
SLX4-202ENST00000466154 LDB2O43679 373 aa16.37■□□□□ 0.21
SLX4-202ENST00000466154 LINC00032P0C843 101 aa16.37■□□□□ 0.21
SLX4-202ENST00000466154 CSRP3P50461 194 aa16.37■□□□□ 0.21
SLX4-202ENST00000466154 FOXA1P55317 472 aa16.37■□□□□ 0.21
SLX4-202ENST00000466154 ACAP2Q15057 778 aa16.37■□□□□ 0.21
SLX4-202ENST00000466154 TLR1Q15399 786 aa16.37■□□□□ 0.21
SLX4-202ENST00000466154 RSPO2Q6UXX9 243 aaPredicted RBP16.37■□□□□ 0.21
SLX4-202ENST00000466154 KIAA0408Q6ZU52 694 aa16.37■□□□□ 0.21
SLX4-202ENST00000466154 ISCA2Q86U28 154 aa16.37■□□□□ 0.21
SLX4-202ENST00000466154 IFNEQ86WN2 208 aa16.37■□□□□ 0.21
SLX4-202ENST00000466154 DENND1CQ8IV53 801 aa16.37■□□□□ 0.21
SLX4-202ENST00000466154 ARRDC2Q8TBH0 407 aa16.37■□□□□ 0.21
SLX4-202ENST00000466154 LINC01599Q8WXQ3 324 aa16.37■□□□□ 0.21
SLX4-202ENST00000466154 PPP1R2P1Q96PQ5 205 aa16.37■□□□□ 0.21
SLX4-202ENST00000466154 TRIM4Q9C037 500 aa16.37■□□□□ 0.21
SLX4-202ENST00000466154 PRDM5Q9NQX1 630 aaPredicted RBP16.37■□□□□ 0.21
SLX4-202ENST00000466154 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.37■□□□□ 0.21
SLX4-202ENST00000466154 TIMM22Q9Y584 194 aa16.37■□□□□ 0.21
SLX4-202ENST00000466154 MYLKQ15746 1914 aa16.37■□□□□ 0.21
SLX4-202ENST00000466154 SCN4AP35499 1836 aa16.37■□□□□ 0.21
SLX4-202ENST00000466154 SCN10AQ9Y5Y9 1956 aa16.37■□□□□ 0.21
SLX4-202ENST00000466154 F5H5T6 163 aa16.37■□□□□ 0.21
SLX4-202ENST00000466154 CDKN1CP49918 316 aaPredicted RBP16.37■□□□□ 0.21
SLX4-202ENST00000466154 AFMIDQ63HM1 303 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms