RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 SCCPDHQ8NBX0 429 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 BEST2Q8NFU1 509 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 NUDCD2Q8WVJ2 157 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 TRIB2Q92519 343 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 GTF3C6Q969F1 213 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 MMTAG2Q9BU76 263 aaKnown RBP4.4□□□□□ -1.71
LRCH3-211ENST00000466054 MAGEE1Q9HCI5 957 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 BPIFA1Q9NP55 256 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 DIAPH3Q9NSV4 1193 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 INTS6Q9UL03 887 aaKnown RBP4.4□□□□□ -1.71
LRCH3-211ENST00000466054 ICAM5Q9UMF0 924 aa4.4□□□□□ -1.71
LRCH3-211ENST00000466054 CKAP5Q14008 2032 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 A0A1B0GVM2 712 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 PI4KAP2A4QPH2 592 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 PGPEP1LA6NFU8 196 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 EIF3CLB5ME19 914 aaKnown RBP4.39□□□□□ -1.71
LRCH3-211ENST00000466054 INAFM1C9JVW0 142 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 BCAT2O15382 392 aaPredicted RBP4.39□□□□□ -1.71
LRCH3-211ENST00000466054 PAGE4O60829 102 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 SEC31AO94979 1220 aaKnown RBP4.39□□□□□ -1.71
LRCH3-211ENST00000466054 HOXC6P09630 235 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 CDH2P19022 906 aaPredicted RBP4.39□□□□□ -1.71
LRCH3-211ENST00000466054 ICAM3P32942 547 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 SHMT1P34896 483 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 ARL3P36405 182 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 AMTP48728 403 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 PMS2P54278 862 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 RAD23BP54727 409 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 EIF5P55010 431 aaKnown RBP4.39□□□□□ -1.71
LRCH3-211ENST00000466054 RRP1P56182 461 aaKnown RBP4.39□□□□□ -1.71
LRCH3-211ENST00000466054 GOLGA8DPQ0D2H9 430 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 Q0VFX4 171 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 TMEM115Q12893 351 aaPredicted RBP4.39□□□□□ -1.71
LRCH3-211ENST00000466054 TRAF2Q12933 501 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 OLIG2Q13516 323 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 MYBPC2Q14324 1141 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 NEDD9Q14511 834 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 HNF4GQ14541 408 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 KRT24Q2M2I5 525 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 HAUS3Q68CZ6 603 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 PLEKHA7Q6IQ23 1121 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 LRRC8EQ6NSJ5 796 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 PXKQ7Z7A4 578 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 TDRPQ86YL5 185 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 NGEFQ8N5V2 710 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 MIGA1Q8NAN2 632 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 PSPC1Q8WXF1 523 aaKnown RBP4.39□□□□□ -1.71
LRCH3-211ENST00000466054 INTS12Q96CB8 462 aaKnown RBP4.39□□□□□ -1.71
LRCH3-211ENST00000466054 ZNF570Q96NI8 536 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 MUC13Q9H3R2 512 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 SLC6A13Q9NSD5 602 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 OR6C3Q9NZP0 311 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 LIMA1Q9UHB6 759 aaKnown RBP4.39□□□□□ -1.71
LRCH3-211ENST00000466054 PNMA2Q9UL42 364 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 AAR2Q9Y312 384 aaKnown RBP4.39□□□□□ -1.71
LRCH3-211ENST00000466054 PAM16Q9Y3D7 125 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 LSM4Q9Y4Z0 139 aaKnown RBP4.39□□□□□ -1.71
LRCH3-211ENST00000466054 PTGDR2Q9Y5Y4 395 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 CAPN7Q9Y6W3 813 aa4.39□□□□□ -1.71
LRCH3-211ENST00000466054 A0A1B0GVT2 93 aa4.38□□□□□ -1.71
LRCH3-211ENST00000466054 NTN3O00634 580 aaPredicted RBP4.38□□□□□ -1.71
LRCH3-211ENST00000466054 LAMP2P13473 410 aa4.38□□□□□ -1.71
LRCH3-211ENST00000466054 ARRB2P32121 409 aa4.38□□□□□ -1.71
LRCH3-211ENST00000466054 CASP2P42575 452 aa4.38□□□□□ -1.71
LRCH3-211ENST00000466054 GAS1P54826 345 aa4.38□□□□□ -1.71
LRCH3-211ENST00000466054 SETQ01105 290 aaPredicted RBP4.38□□□□□ -1.71
LRCH3-211ENST00000466054 MAMLD1Q13495 774 aa4.38□□□□□ -1.71
LRCH3-211ENST00000466054 EIF4A2Q14240 407 aaKnown RBP4.38□□□□□ -1.71
LRCH3-211ENST00000466054 CTTNQ14247 550 aaKnown RBP4.38□□□□□ -1.71
LRCH3-211ENST00000466054 FGFBP1Q14512 234 aa4.38□□□□□ -1.71
LRCH3-211ENST00000466054 USP41Q3LFD5 358 aa4.38□□□□□ -1.71
LRCH3-211ENST00000466054 KRT71Q3SY84 523 aa4.38□□□□□ -1.71
LRCH3-211ENST00000466054 TDRD12Q587J7 1177 aaKnown RBP4.38□□□□□ -1.71
LRCH3-211ENST00000466054 SGO1Q5FBB7 561 aa4.38□□□□□ -1.71
LRCH3-211ENST00000466054 EFHC1Q5JVL4 640 aa4.38□□□□□ -1.71
LRCH3-211ENST00000466054 CCDC30Q5VVM6 783 aa4.38□□□□□ -1.71
LRCH3-211ENST00000466054 SNX30Q5VWJ9 437 aa4.38□□□□□ -1.71
LRCH3-211ENST00000466054 C8orf82Q6P1X6 216 aaPredicted RBP4.38□□□□□ -1.71
LRCH3-211ENST00000466054 LCTLQ6UWM7 567 aa4.38□□□□□ -1.71
LRCH3-211ENST00000466054 CCDC129Q6ZRS4 1044 aa4.38□□□□□ -1.71
LRCH3-211ENST00000466054 NOXA1Q86UR1 476 aa4.38□□□□□ -1.71
LRCH3-211ENST00000466054 AADATQ8N5Z0 425 aa4.38□□□□□ -1.71
LRCH3-211ENST00000466054 PRR26Q8N8Z3 221 aa4.38□□□□□ -1.71
LRCH3-211ENST00000466054 AGBL3Q8NEM8 1001 aa4.38□□□□□ -1.71
LRCH3-211ENST00000466054 ARRDC2Q8TBH0 407 aa4.38□□□□□ -1.71
LRCH3-211ENST00000466054 KCNG4Q8TDN1 519 aa4.38□□□□□ -1.71
LRCH3-211ENST00000466054 ARHGEF2Q92974 986 aaKnown RBP4.38□□□□□ -1.71
LRCH3-211ENST00000466054 PABPC5Q96DU9 382 aaKnown RBP4.38□□□□□ -1.71
LRCH3-211ENST00000466054 LRFN5Q96NI6 719 aa4.38□□□□□ -1.71
LRCH3-211ENST00000466054 TREX2Q9BQ50 279 aaPredicted RBP4.38□□□□□ -1.71
LRCH3-211ENST00000466054 FBRSL1Q9HCM7 1045 aaKnown RBP4.38□□□□□ -1.71
LRCH3-211ENST00000466054 DDX4Q9NQI0 724 aaKnown RBP4.38□□□□□ -1.71
LRCH3-211ENST00000466054 KRT84Q9NSB2 600 aa4.38□□□□□ -1.71
LRCH3-211ENST00000466054 EHD2Q9NZN4 543 aa4.38□□□□□ -1.71
LRCH3-211ENST00000466054 DLGAP2Q9P1A6 1054 aa4.38□□□□□ -1.71
LRCH3-211ENST00000466054 PCDHA7Q9UN72 937 aa4.38□□□□□ -1.71
LRCH3-211ENST00000466054 LAS1LQ9Y4W2 734 aaKnown RBP4.38□□□□□ -1.71
LRCH3-211ENST00000466054 INSL5Q9Y5Q6 135 aa4.38□□□□□ -1.71
LRCH3-211ENST00000466054 PSAT1Q9Y617 370 aa4.38□□□□□ -1.71
LRCH3-211ENST00000466054 KCNE2Q9Y6J6 123 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms