RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 PARS2Q7L3T8 475 aaKnown RBP9.47□□□□□ -0.89
APP-213ENST00000464867 CXorf40AQ8TE69 158 aa9.47□□□□□ -0.89
APP-213ENST00000464867 NUDT8Q8WV74 236 aa9.47□□□□□ -0.89
APP-213ENST00000464867 FAXDC2Q96IV6 333 aa9.47□□□□□ -0.89
APP-213ENST00000464867 CTRCQ99895 268 aa9.47□□□□□ -0.89
APP-213ENST00000464867 SPRY4Q9C004 299 aa9.47□□□□□ -0.89
APP-213ENST00000464867 TNMDQ9H2S6 317 aa9.47□□□□□ -0.89
APP-213ENST00000464867 FRMD4BQ9Y2L6 1034 aa9.47□□□□□ -0.89
APP-213ENST00000464867 ZNF451Q9Y4E5 1061 aa9.47□□□□□ -0.89
APP-213ENST00000464867 TMEM184BQ9Y519 407 aaPredicted RBP9.47□□□□□ -0.89
APP-213ENST00000464867 PCSK5Q92824 1860 aa9.47□□□□□ -0.89
APP-213ENST00000464867 LRP4O75096 1905 aa9.46□□□□□ -0.89
APP-213ENST00000464867 C16orf96A6NNT2 1141 aa9.46□□□□□ -0.9
APP-213ENST00000464867 RNF103O00237 685 aa9.46□□□□□ -0.9
APP-213ENST00000464867 SMAD6O43541 496 aaKnown RBP9.46□□□□□ -0.9
APP-213ENST00000464867 CLDN11O75508 207 aa9.46□□□□□ -0.9
APP-213ENST00000464867 DNAJB5O75953 348 aa9.46□□□□□ -0.9
APP-213ENST00000464867 THRAP10827 490 aa9.46□□□□□ -0.9
APP-213ENST00000464867 MPSTP25325 297 aa9.46□□□□□ -0.9
APP-213ENST00000464867 ITGA3P26006 1051 aa9.46□□□□□ -0.9
APP-213ENST00000464867 CD1CP29017 333 aa9.46□□□□□ -0.9
APP-213ENST00000464867 PTGER4P35408 488 aa9.46□□□□□ -0.9
APP-213ENST00000464867 GPR3P46089 330 aa9.46□□□□□ -0.9
APP-213ENST00000464867 RGS7P49802 495 aa9.46□□□□□ -0.9
APP-213ENST00000464867 MC2RQ01718 297 aa9.46□□□□□ -0.9
APP-213ENST00000464867 MAP7Q14244 749 aa9.46□□□□□ -0.9
APP-213ENST00000464867 LRRC14Q15048 493 aa9.46□□□□□ -0.9
APP-213ENST00000464867 XP32Q5T750 250 aa9.46□□□□□ -0.9
APP-213ENST00000464867 RETSATQ6NUM9 610 aa9.46□□□□□ -0.9
APP-213ENST00000464867 HPS6Q86YV9 775 aa9.46□□□□□ -0.9
APP-213ENST00000464867 IRF2BP1Q8IU81 584 aa9.46□□□□□ -0.9
APP-213ENST00000464867 MMP21Q8N119 569 aa9.46□□□□□ -0.9
APP-213ENST00000464867 RYBPQ8N488 228 aaPredicted RBP9.46□□□□□ -0.9
APP-213ENST00000464867 TAS1R2Q8TE23 839 aa9.46□□□□□ -0.9
APP-213ENST00000464867 SEC14L1Q92503 715 aa9.46□□□□□ -0.9
APP-213ENST00000464867 FAM149B1Q96BN6 582 aa9.46□□□□□ -0.9
APP-213ENST00000464867 HDAC11Q96DB2 347 aa9.46□□□□□ -0.9
APP-213ENST00000464867 WDR92Q96MX6 357 aa9.46□□□□□ -0.9
APP-213ENST00000464867 ZDHHC6Q9H6R6 413 aa9.46□□□□□ -0.9
APP-213ENST00000464867 ACSS2Q9NR19 701 aa9.46□□□□□ -0.9
APP-213ENST00000464867 MBNL1Q9NR56 388 aaKnown RBP9.46□□□□□ -0.9
APP-213ENST00000464867 FBXO8Q9NRD0 319 aa9.46□□□□□ -0.9
APP-213ENST00000464867 LUZP4Q9P127 313 aa9.46□□□□□ -0.9
APP-213ENST00000464867 ZFATQ9P243 1243 aa9.46□□□□□ -0.9
APP-213ENST00000464867 KIAA1257Q9ULG3 409 aa9.46□□□□□ -0.9
APP-213ENST00000464867 PCDHGB7Q9Y5F8 929 aa9.46□□□□□ -0.9
APP-213ENST00000464867 PCDHGA9Q9Y5G4 932 aaKnown RBP9.46□□□□□ -0.9
APP-213ENST00000464867 OR51B4Q9Y5P0 310 aa9.46□□□□□ -0.9
APP-213ENST00000464867 DGKBQ9Y6T7 804 aa9.46□□□□□ -0.9
APP-213ENST00000464867 CROCCQ5TZA2 2017 aa9.45□□□□□ -0.9
APP-213ENST00000464867 SART1O43290 800 aaKnown RBP9.45□□□□□ -0.9
APP-213ENST00000464867 SNAP91O60641 907 aa9.45□□□□□ -0.9
APP-213ENST00000464867 MMP20O60882 483 aa9.45□□□□□ -0.9
APP-213ENST00000464867 NADKO95544 446 aaPredicted RBP9.45□□□□□ -0.9
APP-213ENST00000464867 RECKO95980 971 aa9.45□□□□□ -0.9
APP-213ENST00000464867 RHOCP08134 193 aa9.45□□□□□ -0.9
APP-213ENST00000464867 STAT1P42224 750 aa9.45□□□□□ -0.9
APP-213ENST00000464867 GCLMP48507 274 aa9.45□□□□□ -0.9
APP-213ENST00000464867 VAMP7P51809 220 aa9.45□□□□□ -0.9
APP-213ENST00000464867 MTA1Q13330 715 aa9.45□□□□□ -0.9
APP-213ENST00000464867 IRF4Q15306 451 aa9.45□□□□□ -0.9
APP-213ENST00000464867 ZRSR2Q15696 482 aaKnown RBP9.45□□□□□ -0.9
APP-213ENST00000464867 CHRNA6Q15825 494 aa9.45□□□□□ -0.9
APP-213ENST00000464867 KLHL40Q2TBA0 621 aa9.45□□□□□ -0.9
APP-213ENST00000464867 ZNF805Q5CZA5 627 aa9.45□□□□□ -0.9
APP-213ENST00000464867 CARD16Q5EG05 197 aa9.45□□□□□ -0.9
APP-213ENST00000464867 NKAIN2Q5VXU1 208 aa9.45□□□□□ -0.9
APP-213ENST00000464867 FBXL22Q6P050 247 aa9.45□□□□□ -0.9
APP-213ENST00000464867 TMEM71Q6P5X7 295 aa9.45□□□□□ -0.9
APP-213ENST00000464867 LINGO4Q6UY18 593 aa9.45□□□□□ -0.9
APP-213ENST00000464867 ZNF438Q7Z4V0 828 aa9.45□□□□□ -0.9
APP-213ENST00000464867 BRAPQ7Z569 592 aa9.45□□□□□ -0.9
APP-213ENST00000464867 TTC7BQ86TV6 843 aa9.45□□□□□ -0.9
APP-213ENST00000464867 TAC4Q86UU9 113 aa9.45□□□□□ -0.9
APP-213ENST00000464867 IQCKQ8N0W5 287 aa9.45□□□□□ -0.9
APP-213ENST00000464867 PCDH20Q8N6Y1 951 aaKnown RBP9.45□□□□□ -0.9
APP-213ENST00000464867 PDILTQ8N807 584 aa9.45□□□□□ -0.9
APP-213ENST00000464867 TP53I13Q8NBR0 393 aaPredicted RBP9.45□□□□□ -0.9
APP-213ENST00000464867 PNPLA2Q96AD5 504 aa9.45□□□□□ -0.9
APP-213ENST00000464867 AHCYL2Q96HN2 611 aaKnown RBP9.45□□□□□ -0.9
APP-213ENST00000464867 PRMT1Q99873 361 aaKnown RBP9.45□□□□□ -0.9
APP-213ENST00000464867 APOOQ9BUR5 198 aa9.45□□□□□ -0.9
APP-213ENST00000464867 CEP44Q9C0F1 390 aa9.45□□□□□ -0.9
APP-213ENST00000464867 MIS12Q9H081 205 aa9.45□□□□□ -0.9
APP-213ENST00000464867 MMRN2Q9H8L6 949 aa9.45□□□□□ -0.9
APP-213ENST00000464867 RCOR3Q9P2K3 495 aaPredicted RBP9.45□□□□□ -0.9
APP-213ENST00000464867 VPS51Q9UID3 782 aa9.45□□□□□ -0.9
APP-213ENST00000464867 ITM2BQ9Y287 266 aa9.45□□□□□ -0.9
APP-213ENST00000464867 TBC1D30Q9Y2I9 924 aa9.45□□□□□ -0.9
APP-213ENST00000464867 SRPRBQ9Y5M8 271 aaKnown RBP9.45□□□□□ -0.9
APP-213ENST00000464867 PKDREJQ9NTG1 2253 aa9.45□□□□□ -0.9
APP-213ENST00000464867 POLEQ07864 2286 aa9.44□□□□□ -0.9
APP-213ENST00000464867 AKAP9Q99996 3911 aa9.44□□□□□ -0.9
APP-213ENST00000464867 POLR1CO15160 346 aaPredicted RBP9.44□□□□□ -0.9
APP-213ENST00000464867 KRT86O43790 486 aa9.44□□□□□ -0.9
APP-213ENST00000464867 PPP6R2O75170 966 aa9.44□□□□□ -0.9
APP-213ENST00000464867 CREG1O75629 220 aa9.44□□□□□ -0.9
APP-213ENST00000464867 FAM155BO75949 473 aa9.44□□□□□ -0.9
APP-213ENST00000464867 VDRP11473 427 aa9.44□□□□□ -0.9
APP-213ENST00000464867 KELP23276 732 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms