RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 SKOR2Q2VWA4 1001 aaPredicted RBP18.91■□□□□ 0.62
SF3A1-205ENST00000463818 MARC1Q5VT66 337 aa18.91■□□□□ 0.62
SF3A1-205ENST00000463818 PNCKQ6P2M8 343 aa18.91■□□□□ 0.62
SF3A1-205ENST00000463818 PELI3Q8N2H9 469 aa18.91■□□□□ 0.62
SF3A1-205ENST00000463818 ARL10Q8N8L6 244 aa18.91■□□□□ 0.62
SF3A1-205ENST00000463818 OR56A4Q8NGH8 313 aa18.91■□□□□ 0.62
SF3A1-205ENST00000463818 OR1E3Q8WZA6 343 aa18.91■□□□□ 0.62
SF3A1-205ENST00000463818 SPOCK2Q92563 424 aa18.91■□□□□ 0.62
SF3A1-205ENST00000463818 GRAMD1AQ96CP6 724 aa18.91■□□□□ 0.62
SF3A1-205ENST00000463818 ATXN7L3BQ96GX2 97 aa18.91■□□□□ 0.62
SF3A1-205ENST00000463818 MGME1Q9BQP7 344 aa18.91■□□□□ 0.62
SF3A1-205ENST00000463818 ENTPD2Q9Y5L3 495 aa18.91■□□□□ 0.62
SF3A1-205ENST00000463818 DGKBQ9Y6T7 804 aa18.91■□□□□ 0.62
SF3A1-205ENST00000463818 NBEAQ8NFP9 2946 aa18.9■□□□□ 0.62
SF3A1-205ENST00000463818 ATRXP46100 2492 aa18.9■□□□□ 0.62
SF3A1-205ENST00000463818 SOCS5O75159 536 aa18.9■□□□□ 0.62
SF3A1-205ENST00000463818 TCEA3O75764 348 aa18.9■□□□□ 0.62
SF3A1-205ENST00000463818 DXOO77932 396 aaKnown RBP18.9■□□□□ 0.62
SF3A1-205ENST00000463818 CD48P09326 243 aa18.9■□□□□ 0.62
SF3A1-205ENST00000463818 MMP13P45452 471 aa18.9■□□□□ 0.62
SF3A1-205ENST00000463818 MAXP61244 160 aa18.9■□□□□ 0.62
SF3A1-205ENST00000463818 ATP13A4Q4VNC1 1196 aa18.9■□□□□ 0.62
SF3A1-205ENST00000463818 CBARPQ8N350 705 aaPredicted RBP18.9■□□□□ 0.62
SF3A1-205ENST00000463818 KYQ8NBH2 561 aa18.9■□□□□ 0.62
SF3A1-205ENST00000463818 WDR48Q8TAF3 677 aa18.9■□□□□ 0.62
SF3A1-205ENST00000463818 PDXPQ96GD0 296 aa18.9■□□□□ 0.62
SF3A1-205ENST00000463818 NAF1Q96HR8 494 aaKnown RBP18.9■□□□□ 0.62
SF3A1-205ENST00000463818 COQ10AQ96MF6 247 aa18.9■□□□□ 0.62
SF3A1-205ENST00000463818 BBC3Q96PG8 261 aaPredicted RBP18.9■□□□□ 0.62
SF3A1-205ENST00000463818 RBM15Q96T37 977 aaKnown RBP eCLIP18.9■□□□□ 0.62
SF3A1-205ENST00000463818 LGR4Q9BXB1 951 aa18.9■□□□□ 0.62
SF3A1-205ENST00000463818 PRORYQ9H606 182 aa18.9■□□□□ 0.62
SF3A1-205ENST00000463818 MRPL40Q9NQ50 206 aaKnown RBP18.9■□□□□ 0.62
SF3A1-205ENST00000463818 RCOR3Q9P2K3 495 aaPredicted RBP18.9■□□□□ 0.62
SF3A1-205ENST00000463818 PHTF1Q9UMS5 762 aa18.9■□□□□ 0.62
SF3A1-205ENST00000463818 A0A1W2PNU3 283 aaPredicted RBP18.89■□□□□ 0.61
SF3A1-205ENST00000463818 TNFRSF10CO14798 259 aa18.89■□□□□ 0.61
SF3A1-205ENST00000463818 CPP00450 1065 aa18.89■□□□□ 0.61
SF3A1-205ENST00000463818 KELP23276 732 aa18.89■□□□□ 0.61
SF3A1-205ENST00000463818 VIPR1P32241 457 aa18.89■□□□□ 0.61
SF3A1-205ENST00000463818 ARSEP51690 589 aa18.89■□□□□ 0.61
SF3A1-205ENST00000463818 ERVPABLB-1P60509 514 aa18.89■□□□□ 0.61
SF3A1-205ENST00000463818 TRAF2Q12933 501 aa18.89■□□□□ 0.61
SF3A1-205ENST00000463818 CNGA3Q16281 694 aa18.89■□□□□ 0.61
SF3A1-205ENST00000463818 C3orf38Q5JPI3 329 aa18.89■□□□□ 0.61
SF3A1-205ENST00000463818 RALGPS1Q5JS13 557 aa18.89■□□□□ 0.61
SF3A1-205ENST00000463818 DENND2CQ68D51 928 aa18.89■□□□□ 0.61
SF3A1-205ENST00000463818 TAF8Q7Z7C8 310 aa18.89■□□□□ 0.61
SF3A1-205ENST00000463818 LRRC49Q8IUZ0 686 aa18.89■□□□□ 0.61
SF3A1-205ENST00000463818 SPACA3Q8IXA5 215 aa18.89■□□□□ 0.61
SF3A1-205ENST00000463818 ZNF248Q8NDW4 579 aa18.89■□□□□ 0.61
SF3A1-205ENST00000463818 ZNF564Q8TBZ8 553 aaPredicted RBP18.89■□□□□ 0.61
SF3A1-205ENST00000463818 FAM71BQ8TC56 605 aa18.89■□□□□ 0.61
SF3A1-205ENST00000463818 HIC2Q96JB3 615 aa18.89■□□□□ 0.61
SF3A1-205ENST00000463818 LGMNQ99538 433 aa18.89■□□□□ 0.61
SF3A1-205ENST00000463818 FGF22Q9HCT0 170 aa18.89■□□□□ 0.61
SF3A1-205ENST00000463818 NT5MQ9NPB1 228 aa18.89■□□□□ 0.61
SF3A1-205ENST00000463818 NENFQ9UMX5 172 aa18.89■□□□□ 0.61
SF3A1-205ENST00000463818 SATB2Q9UPW6 733 aa18.89■□□□□ 0.61
SF3A1-205ENST00000463818 PDE2AO00408 941 aaPredicted RBP18.88■□□□□ 0.61
SF3A1-205ENST00000463818 NTN3O00634 580 aaPredicted RBP18.88■□□□□ 0.61
SF3A1-205ENST00000463818 HEXIM1O94992 359 aaKnown RBP18.88■□□□□ 0.61
SF3A1-205ENST00000463818 CYP2A6P11509 494 aaPredicted RBP18.88■□□□□ 0.61
SF3A1-205ENST00000463818 RBMS1P29558 406 aaKnown RBP18.88■□□□□ 0.61
SF3A1-205ENST00000463818 PCBP4P57723 403 aaKnown RBP18.88■□□□□ 0.61
SF3A1-205ENST00000463818 TLE3Q04726 772 aa18.88■□□□□ 0.61
SF3A1-205ENST00000463818 ITKQ08881 620 aa18.88■□□□□ 0.61
SF3A1-205ENST00000463818 SPIDRQ14159 915 aa18.88■□□□□ 0.61
SF3A1-205ENST00000463818 OGFOD3Q6PK18 319 aa18.88■□□□□ 0.61
SF3A1-205ENST00000463818 CPNE8Q86YQ8 564 aa18.88■□□□□ 0.61
SF3A1-205ENST00000463818 TEX26Q8N6G2 289 aa18.88■□□□□ 0.61
SF3A1-205ENST00000463818 KCTD6Q8NC69 237 aa18.88■□□□□ 0.61
SF3A1-205ENST00000463818 FAM46DQ8NEK8 389 aa18.88■□□□□ 0.61
SF3A1-205ENST00000463818 CCDC74AQ96AQ1 378 aa18.88■□□□□ 0.61
SF3A1-205ENST00000463818 NUS1Q96E22 293 aa18.88■□□□□ 0.61
SF3A1-205ENST00000463818 SCRN2Q96FV2 425 aa18.88■□□□□ 0.61
SF3A1-205ENST00000463818 SLC46A1Q96NT5 459 aa18.88■□□□□ 0.61
SF3A1-205ENST00000463818 XPO4Q9C0E2 1151 aaKnown RBP18.88■□□□□ 0.61
SF3A1-205ENST00000463818 TMEM168Q9H0V1 697 aa18.88■□□□□ 0.61
SF3A1-205ENST00000463818 WDR26Q9H7D7 661 aa18.88■□□□□ 0.61
SF3A1-205ENST00000463818 SYNDIG1Q9H7V2 258 aa18.88■□□□□ 0.61
SF3A1-205ENST00000463818 CYP4F12Q9HCS2 524 aa18.88■□□□□ 0.61
SF3A1-205ENST00000463818 ASCL3Q9NQ33 180 aa18.88■□□□□ 0.61
SF3A1-205ENST00000463818 CTTNBP2NLQ9P2B4 639 aa18.88■□□□□ 0.61
SF3A1-205ENST00000463818 RABGEF1Q9UJ41 708 aa18.88■□□□□ 0.61
SF3A1-205ENST00000463818 MOSPD1Q9UJG1 213 aa18.88■□□□□ 0.61
SF3A1-205ENST00000463818 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.88■□□□□ 0.611e-7■□□□□ 9.2
SF3A1-205ENST00000463818 PGLSO95336 258 aa18.87■□□□□ 0.61
SF3A1-205ENST00000463818 NFKBIAP25963 317 aa18.87■□□□□ 0.61
SF3A1-205ENST00000463818 HNRNPH3P31942 346 aaKnown RBP18.87■□□□□ 0.61
SF3A1-205ENST00000463818 GJC1P36383 396 aa18.87■□□□□ 0.61
SF3A1-205ENST00000463818 ETV3P41162 512 aa18.87■□□□□ 0.61
SF3A1-205ENST00000463818 CCL7P80098 99 aa18.87■□□□□ 0.61
SF3A1-205ENST00000463818 DPYSL3Q14195 570 aa18.87■□□□□ 0.61
SF3A1-205ENST00000463818 PTPRRQ15256 657 aa18.87■□□□□ 0.61
SF3A1-205ENST00000463818 ARMC12Q5T9G4 340 aa18.87■□□□□ 0.61
SF3A1-205ENST00000463818 HSD11B1LQ7Z5J1 315 aa18.87■□□□□ 0.61
SF3A1-205ENST00000463818 GPR156Q8NFN8 814 aa18.87■□□□□ 0.61
SF3A1-205ENST00000463818 OR6C4Q8NGE1 309 aa18.87■□□□□ 0.61
SF3A1-205ENST00000463818 PIH1D2Q8WWB5 315 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms