RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 OR1D2P34982 312 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 PSMC2P35998 433 aaKnown RBP3.81□□□□□ -1.8
SCFD1-204ENST00000463622 VIPR2P41587 438 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 CCR2P41597 374 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 IL12RB1P42701 662 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 MATR3P43243 847 aaKnown RBP eCLIP3.81□□□□□ -1.81e-6■■■□□ 19
SCFD1-204ENST00000463622 ZNF75DP51815 510 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 FCHO2Q0JRZ9 810 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 ELAVL2Q12926 359 aaKnown RBP3.81□□□□□ -1.8
SCFD1-204ENST00000463622 BFSP1Q12934 665 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 GRIK3Q13003 919 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 KLF1Q13351 362 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-204ENST00000463622 MPP3Q13368 585 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 STIM1Q13586 685 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 PSMD6Q15008 389 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 CYP2A13Q16696 494 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 CCDC142Q17RM4 750 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 CCDC40Q4G0X9 1142 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 EGFLAMQ63HQ2 1017 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 TCEAL6Q6IPX3 200 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 FBXO42Q6P3S6 717 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 NOTUMQ6P988 496 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 SLC27A1Q6PCB7 646 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 FOXR2Q6PJQ5 311 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 ALKAL1Q6UXT8 129 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 Q6ZS52 159 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 SEM1Q6ZVN7 128 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 RALGPS2Q86X27 583 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-204ENST00000463622 EXOC8Q8IYI6 725 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 TCEAL8Q8IYN2 117 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 DCBLD1Q8N8Z6 715 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 SIMC1Q8NDZ2 872 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 ZNF461Q8TAF7 563 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 OLIG1Q8TAK6 271 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 TAS1R2Q8TE23 839 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 PARD3BQ8TEW8 1205 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 TMEM174Q8WUU8 243 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 CASKIN2Q8WXE0 1202 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 TCEAL3Q969E4 200 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 RSPRY1Q96DX4 576 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 TCEAL4Q96EI5 215 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 LRRC3BQ96PB8 259 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 TSG101Q99816 390 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 TUBGCP2Q9BSJ2 902 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 TCHPQ9BT92 498 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 MTMR12Q9C0I1 747 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 RBAKQ9NYW8 714 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-204ENST00000463622 EXOC7Q9UPT5 735 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 C2orf16Q68DN1 1984 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 ITPR1Q14643 2758 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 AKAP13Q12802 2813 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 SMIM28A0A1B0GU29 152 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 LGALS16A8MUM7 142 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 TMEM189-UBE2V1I3L0A0 370 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 ADCY5O95622 1261 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 CAVIN2O95810 425 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 SBK3P0C264 359 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 SLC6A4P31645 630 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 MTIF2P46199 727 aaKnown RBP3.8□□□□□ -1.8
SCFD1-204ENST00000463622 VAMP7P51809 220 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 LRMPQ12912 555 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 ACAP2Q15057 778 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 SYCP1Q15431 976 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 ZBTB6Q15916 424 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 TPD52L1Q16890 204 aaPredicted RBP3.8□□□□□ -1.8
SCFD1-204ENST00000463622 GEN1Q17RS7 908 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 XKR4Q5GH76 650 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 SLC8B1Q6J4K2 584 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 SARM1Q6SZW1 724 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 STXBP4Q6ZWJ1 553 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 RD3Q7Z3Z2 195 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 PIP4P1Q86T03 277 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 CEP57Q86XR8 500 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 CAMKK1Q8N5S9 505 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 PTCD3Q96EY7 689 aaKnown RBP3.8□□□□□ -1.8
SCFD1-204ENST00000463622 ZNF764Q96H86 408 aaPredicted RBP3.8□□□□□ -1.8
SCFD1-204ENST00000463622 CGRRF1Q99675 332 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 EDEM2Q9BV94 578 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 TTYH3Q9C0H2 523 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 GPR88Q9GZN0 384 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 SDCBP2Q9H190 292 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 GANQ9H2C0 597 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 GALNT9Q9HCQ5 603 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 ARMCX3Q9UH62 379 aaPredicted RBP3.8□□□□□ -1.8
SCFD1-204ENST00000463622 TUBD1Q9UJT1 453 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 MAFFQ9ULX9 164 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 SMG1Q96Q15 3661 aaKnown RBP3.8□□□□□ -1.8
SCFD1-204ENST00000463622 LNP1A1A4G5 178 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 CASTOR2A6NHX0 329 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 ZNF233A6NK53 670 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 CYSRT1A8MQ03 144 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 SMTNL1A8MU46 457 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 FAM171A2A8MVW0 826 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 HEPACAM2A8MVW5 462 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 SPECC1L-ADORA2AF8WAN1 911 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 H0YCG3 227 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 GOLGA6L19H0YKK7 550 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 I3L4J1 428 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 SEC24AO95486 1093 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 HLA-DRAP01903 254 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms