RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 PCDHGA12O60330 932 aa17.74■□□□□ 0.43
VPS52-214ENST00000463486 CBFA2T3O75081 653 aa17.74■□□□□ 0.43
VPS52-214ENST00000463486 RECQL5O94762 991 aaPredicted RBP17.74■□□□□ 0.43
VPS52-214ENST00000463486 MT-CYBP00156 380 aaPredicted RBP17.74■□□□□ 0.43
VPS52-214ENST00000463486 RBP3P10745 1247 aa17.74■□□□□ 0.43
VPS52-214ENST00000463486 CTPS1P17812 591 aa17.74■□□□□ 0.43
VPS52-214ENST00000463486 CSRP1P21291 193 aaKnown RBP17.74■□□□□ 0.43
VPS52-214ENST00000463486 CETN2P41208 172 aa17.74■□□□□ 0.43
VPS52-214ENST00000463486 EIF3EP60228 445 aaKnown RBP17.74■□□□□ 0.43
VPS52-214ENST00000463486 RPS6KA1Q15418 735 aa17.74■□□□□ 0.43
VPS52-214ENST00000463486 QPCTQ16769 361 aa17.74■□□□□ 0.43
VPS52-214ENST00000463486 CRTC1Q6UUV9 634 aa17.74■□□□□ 0.43
VPS52-214ENST00000463486 HSD11B1LQ7Z5J1 315 aa17.74■□□□□ 0.43
VPS52-214ENST00000463486 PELI3Q8N2H9 469 aa17.74■□□□□ 0.43
VPS52-214ENST00000463486 SLC35B2Q8TB61 432 aa17.74■□□□□ 0.43
VPS52-214ENST00000463486 SAP25Q8TEE9 199 aa17.74■□□□□ 0.43
VPS52-214ENST00000463486 FUBP1Q96AE4 644 aaKnown RBP17.74■□□□□ 0.43
VPS52-214ENST00000463486 VAT1Q99536 393 aa17.74■□□□□ 0.43
VPS52-214ENST00000463486 HAUS2Q9NVX0 235 aa17.74■□□□□ 0.43
VPS52-214ENST00000463486 PNMA8BQ9ULN7 279 aaPredicted RBP17.74■□□□□ 0.43
VPS52-214ENST00000463486 SPEGQ15772 3267 aa17.74■□□□□ 0.43
VPS52-214ENST00000463486 SPTY2D1-AS1A0A0U1RR47 76 aa17.73■□□□□ 0.43
VPS52-214ENST00000463486 A6NNZ2 444 aa17.73■□□□□ 0.43
VPS52-214ENST00000463486 ANKRD66B4E2M5 251 aa17.73■□□□□ 0.43
VPS52-214ENST00000463486 H7C0C1 242 aa17.73■□□□□ 0.43
VPS52-214ENST00000463486 FPGTO14772 594 aa17.73■□□□□ 0.43
VPS52-214ENST00000463486 DFNA5O60443 496 aa17.73■□□□□ 0.43
VPS52-214ENST00000463486 NEBLO76041 1014 aa17.73■□□□□ 0.43
VPS52-214ENST00000463486 ELFN1P0C7U0 828 aa17.73■□□□□ 0.43
VPS52-214ENST00000463486 NFKB1P19838 968 aa17.73■□□□□ 0.43
VPS52-214ENST00000463486 ATP5OP48047 213 aa17.73■□□□□ 0.43
VPS52-214ENST00000463486 PTSQ03393 145 aa17.73■□□□□ 0.43
VPS52-214ENST00000463486 FZD2Q14332 565 aa17.73■□□□□ 0.43
VPS52-214ENST00000463486 LRRC14Q15048 493 aa17.73■□□□□ 0.43
VPS52-214ENST00000463486 IRF4Q15306 451 aa17.73■□□□□ 0.43
VPS52-214ENST00000463486 KDELC1Q6UW63 502 aa17.73■□□□□ 0.43
VPS52-214ENST00000463486 TECPR1Q7Z6L1 1165 aa17.73■□□□□ 0.43
VPS52-214ENST00000463486 PLA2G15Q8NCC3 412 aa17.73■□□□□ 0.43
VPS52-214ENST00000463486 TRIM58Q8NG06 486 aa17.73■□□□□ 0.43
VPS52-214ENST00000463486 OXNAD1Q96HP4 312 aaPredicted RBP17.73■□□□□ 0.43
VPS52-214ENST00000463486 FCRL5Q96RD9 977 aa17.73■□□□□ 0.43
VPS52-214ENST00000463486 CARD9Q9H257 536 aa17.73■□□□□ 0.43
VPS52-214ENST00000463486 TRHDEQ9UKU6 1024 aa17.73■□□□□ 0.43
VPS52-214ENST00000463486 ARID1BQ8NFD5 2236 aaPredicted RBP17.73■□□□□ 0.43
VPS52-214ENST00000463486 GIPC1O14908 333 aa17.72■□□□□ 0.43
VPS52-214ENST00000463486 SH3BP5O60239 455 aa17.72■□□□□ 0.43
VPS52-214ENST00000463486 LZTS3O60299 673 aaPredicted RBP17.72■□□□□ 0.43
VPS52-214ENST00000463486 MAGEC1O60732 1142 aa17.72■□□□□ 0.43
VPS52-214ENST00000463486 KCNK5O95279 499 aa17.72■□□□□ 0.43
VPS52-214ENST00000463486 RABIFP47224 123 aa17.72■□□□□ 0.43
VPS52-214ENST00000463486 BNIP3Q12983 259 aa17.72■□□□□ 0.43
VPS52-214ENST00000463486 SIX1Q15475 284 aaPredicted RBP17.72■□□□□ 0.43
VPS52-214ENST00000463486 CCDC181Q5TID7 509 aa17.72■□□□□ 0.43
VPS52-214ENST00000463486 RFLNAQ6ZTI6 216 aa17.72■□□□□ 0.43
VPS52-214ENST00000463486 USP45Q70EL2 814 aa17.72■□□□□ 0.43
VPS52-214ENST00000463486 SLC13A5Q86YT5 568 aaPredicted RBP17.72■□□□□ 0.43
VPS52-214ENST00000463486 DCP2Q8IU60 420 aaKnown RBP17.72■□□□□ 0.43
VPS52-214ENST00000463486 BAHD1Q8TBE0 780 aaPredicted RBP17.72■□□□□ 0.43
VPS52-214ENST00000463486 EID2BQ96D98 161 aa17.72■□□□□ 0.43
VPS52-214ENST00000463486 CAMK1GQ96NX5 476 aa17.72■□□□□ 0.43
VPS52-214ENST00000463486 UBP1Q9NZI7 540 aa17.72■□□□□ 0.43
VPS52-214ENST00000463486 KLF15Q9UIH9 416 aa17.72■□□□□ 0.43
VPS52-214ENST00000463486 BTBD3Q9Y2F9 522 aa17.72■□□□□ 0.43
VPS52-214ENST00000463486 LOC285095A0A1B0GVY8 99 aa17.71■□□□□ 0.43
VPS52-214ENST00000463486 CAPN8A6NHC0 703 aa17.71■□□□□ 0.43
VPS52-214ENST00000463486 PSMD11O00231 422 aa17.71■□□□□ 0.43
VPS52-214ENST00000463486 CYP2A6P11509 494 aaPredicted RBP17.71■□□□□ 0.43
VPS52-214ENST00000463486 EPHA8P29322 1005 aaPredicted RBP17.71■□□□□ 0.43
VPS52-214ENST00000463486 TRIM23P36406 574 aa17.71■□□□□ 0.43
VPS52-214ENST00000463486 ETV3P41162 512 aa17.71■□□□□ 0.43
VPS52-214ENST00000463486 CCT8P50990 548 aa17.71■□□□□ 0.43
VPS52-214ENST00000463486 YPEL5P62699 121 aa17.71■□□□□ 0.43
VPS52-214ENST00000463486 IL9RQ01113 521 aa17.71■□□□□ 0.43
VPS52-214ENST00000463486 CDK18Q07002 472 aa17.71■□□□□ 0.43
VPS52-214ENST00000463486 INPP5AQ14642 412 aa17.71■□□□□ 0.43
VPS52-214ENST00000463486 LRRC66Q68CR7 880 aa17.71■□□□□ 0.43
VPS52-214ENST00000463486 NYAP1Q6ZVC0 841 aa17.71■□□□□ 0.43
VPS52-214ENST00000463486 Q6ZVL8 140 aa17.71■□□□□ 0.43
VPS52-214ENST00000463486 PID1Q7Z2X4 250 aa17.71■□□□□ 0.43
VPS52-214ENST00000463486 PTAR1Q7Z6K3 402 aaPredicted RBP17.71■□□□□ 0.43
VPS52-214ENST00000463486 CDKL3Q8IVW4 592 aaPredicted RBP17.71■□□□□ 0.43
VPS52-214ENST00000463486 TTC13Q8NBP0 860 aa17.71■□□□□ 0.43
VPS52-214ENST00000463486 DEFB124Q8NES8 71 aa17.71■□□□□ 0.43
VPS52-214ENST00000463486 LPCAT1Q8NF37 534 aa17.71■□□□□ 0.43
VPS52-214ENST00000463486 IFT43Q96FT9 208 aa17.71■□□□□ 0.43
VPS52-214ENST00000463486 ALS2CR12Q96Q35 445 aa17.71■□□□□ 0.43
VPS52-214ENST00000463486 C1QTNF7Q9BXJ2 289 aa17.71■□□□□ 0.43
VPS52-214ENST00000463486 KLHL8Q9P2G9 620 aaPredicted RBP17.71■□□□□ 0.43
VPS52-214ENST00000463486 PCOLCE2Q9UKZ9 415 aa17.71■□□□□ 0.43
VPS52-214ENST00000463486 CEP295Q9C0D2 2601 aa17.7■□□□□ 0.42
VPS52-214ENST00000463486 GOLGA8CPA6NN73 597 aa17.7■□□□□ 0.42
VPS52-214ENST00000463486 K7ESM1 405 aa17.7■□□□□ 0.42
VPS52-214ENST00000463486 TOR1BO14657 336 aa17.7■□□□□ 0.42
VPS52-214ENST00000463486 C1SP09871 688 aa17.7■□□□□ 0.42
VPS52-214ENST00000463486 ATXN1LP0C7T5 689 aaKnown RBP17.7■□□□□ 0.42
VPS52-214ENST00000463486 GIMD1P0DJR0 217 aa17.7■□□□□ 0.42
VPS52-214ENST00000463486 CA4P22748 312 aa17.7■□□□□ 0.42
VPS52-214ENST00000463486 STC1P52823 247 aa17.7■□□□□ 0.42
VPS52-214ENST00000463486 EIF2B5Q13144 721 aaKnown RBP17.7■□□□□ 0.42
VPS52-214ENST00000463486 PDE1CQ14123 709 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms