RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 TTC4O95801 387 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 C1QAP02745 245 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 ADRB3P13945 408 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 TSHRP16473 764 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 LHCGRP22888 699 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 MMP12P39900 470 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 MAGEA9P43362 315 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 NEK3P51956 506 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 PMS2P54278 862 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 PTSQ03393 145 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 RALGDSQ12967 914 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 UAP1Q16222 522 aaPredicted RBP14.38□□□□□ -0.11
COL6A1-202ENST00000463060 MAP9Q49MG5 647 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 TMEM52BQ4KMG9 183 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 ANKRD20A4Q4UJ75 823 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 TSTD2Q5T7W7 516 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 AGBL4Q5VU57 503 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 FBXO38Q6PIJ6 1188 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 USP45Q70EL2 814 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 CYS1Q717R9 158 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 DPPA4Q7L190 304 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 NLRP9Q7RTR0 991 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 TSPAN33Q86UF1 283 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 NDUFAF2Q8N183 169 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 BLOC1S5Q8TDH9 187 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 PYROXD1Q8WU10 500 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 ANKRD7Q92527 254 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 PEX13Q92968 403 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 RAB7BQ96AH8 199 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 SIPA1Q96FS4 1042 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 C9orf72Q96LT7 481 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 IER2Q9BTL4 223 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 FUT8Q9BYC5 575 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 POLMQ9NP87 494 aaPredicted RBP14.38□□□□□ -0.11
COL6A1-202ENST00000463060 ITM2CQ9NQX7 267 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.38□□□□□ -0.11
COL6A1-202ENST00000463060 IL17CQ9P0M4 197 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 SERGEFQ9UGK8 458 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 EBF1Q9UH73 591 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 CHMP2BQ9UQN3 213 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 ZNF711Q9Y462 761 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 FADS3Q9Y5Q0 445 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 ARL5AQ9Y689 179 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 MAD1L1Q9Y6D9 718 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 FAM169AQ9Y6X4 670 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 STK25O00506 426 aa14.37□□□□□ -0.11
COL6A1-202ENST00000463060 ERLIN1O75477 346 aa14.37□□□□□ -0.11
COL6A1-202ENST00000463060 USP1O94782 785 aa14.37□□□□□ -0.11
COL6A1-202ENST00000463060 ALDH1A2O94788 518 aa14.37□□□□□ -0.11
COL6A1-202ENST00000463060 CLDN7O95471 211 aa14.37□□□□□ -0.11
COL6A1-202ENST00000463060 CRTAMO95727 393 aa14.37□□□□□ -0.11
COL6A1-202ENST00000463060 IGLV3-19P01714 112 aa14.37□□□□□ -0.11
COL6A1-202ENST00000463060 DNTTP04053 509 aa14.37□□□□□ -0.11
COL6A1-202ENST00000463060 DCNP07585 359 aaKnown RBP14.37□□□□□ -0.11
COL6A1-202ENST00000463060 GSTA2P09210 222 aa14.37□□□□□ -0.11
COL6A1-202ENST00000463060 PGAM1P18669 254 aa14.37□□□□□ -0.11
COL6A1-202ENST00000463060 AOC1P19801 751 aa14.37□□□□□ -0.11
COL6A1-202ENST00000463060 NMBRP28336 390 aa14.37□□□□□ -0.11
COL6A1-202ENST00000463060 VIPR1P32241 457 aa14.37□□□□□ -0.11
COL6A1-202ENST00000463060 HMGCLP35914 325 aa14.37□□□□□ -0.11
COL6A1-202ENST00000463060 ZNF140P52738 457 aaPredicted RBP14.37□□□□□ -0.11
COL6A1-202ENST00000463060 MTAPQ13126 283 aa14.37□□□□□ -0.11
COL6A1-202ENST00000463060 LAMB3Q13751 1172 aa14.37□□□□□ -0.11
COL6A1-202ENST00000463060 FRG1Q14331 258 aaKnown RBP14.37□□□□□ -0.11
COL6A1-202ENST00000463060 LRRC73Q5JTD7 316 aa14.37□□□□□ -0.11
COL6A1-202ENST00000463060 SPDYCQ5MJ68 293 aa14.37□□□□□ -0.11
COL6A1-202ENST00000463060 CFAP58Q5T655 872 aa14.37□□□□□ -0.11
COL6A1-202ENST00000463060 ESRP1Q6NXG1 681 aaKnown RBP14.37□□□□□ -0.11
COL6A1-202ENST00000463060 FBXL19Q6PCT2 694 aa14.37□□□□□ -0.11
COL6A1-202ENST00000463060 UNC5AQ6ZN44 842 aa14.37□□□□□ -0.11
COL6A1-202ENST00000463060 USP30Q70CQ3 517 aa14.37□□□□□ -0.11
COL6A1-202ENST00000463060 LYSMD3Q7Z3D4 306 aa14.37□□□□□ -0.11
COL6A1-202ENST00000463060 RASSF3Q86WH2 238 aa14.37□□□□□ -0.11
COL6A1-202ENST00000463060 HDDC3Q8N4P3 179 aa14.37□□□□□ -0.11
COL6A1-202ENST00000463060 PPHLN1Q8NEY8 458 aaKnown RBP14.37□□□□□ -0.11
COL6A1-202ENST00000463060 OR13J1Q8NGT2 312 aa14.37□□□□□ -0.11
COL6A1-202ENST00000463060 MFSD3Q96ES6 412 aa14.37□□□□□ -0.11
COL6A1-202ENST00000463060 MOCS1Q9NZB8 636 aa14.37□□□□□ -0.11
COL6A1-202ENST00000463060 USP36Q9P275 1121 aaKnown RBP14.37□□□□□ -0.11
COL6A1-202ENST00000463060 SLC2A6Q9UGQ3 507 aa14.37□□□□□ -0.11
COL6A1-202ENST00000463060 ZC3H7BQ9UGR2 993 aaKnown RBP14.37□□□□□ -0.11
COL6A1-202ENST00000463060 A0A1W2PP55 124 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 TCRBV21S2A2A0A5A6 115 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 TMEM221A6NGB7 291 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 C2orf81A6NN90 581 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 M0R296 226 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 SLC7A4O43246 635 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 RIPK2O43353 540 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 POLBP06746 335 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 GM2AP17900 193 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 LPOP22079 712 aaPredicted RBP14.36□□□□□ -0.11
COL6A1-202ENST00000463060 ARNTP27540 789 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 SSTR1P30872 391 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 HSD17B3P37058 310 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 ARCN1P48444 511 aaKnown RBP14.36□□□□□ -0.11
COL6A1-202ENST00000463060 CLCN5P51795 746 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 STC1P52823 247 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 SEMG2Q02383 582 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 CREB5Q02930 508 aa14.36□□□□□ -0.11
COL6A1-202ENST00000463060 ELP6Q0PNE2 266 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms