RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 SYN3O14994 580 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 ZNF185O15231 689 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 BAIAP3O94812 1187 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 FGBP02675 491 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 C1SP09871 688 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 KRT3P12035 628 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 TKTP29401 623 aaKnown RBP7.6□□□□□ -1.19
UBE4B-204ENST00000462658 CXCR5P32302 372 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 SLC1A1P43005 524 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 ACADSBP45954 432 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 DNA2P51530 1060 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 HK3P52790 923 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 TERF1P54274 439 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 GSCP56915 257 aaPredicted RBP7.6□□□□□ -1.19
UBE4B-204ENST00000462658 SLC8A3P57103 927 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 WDR5P61964 334 aaKnown RBP7.6□□□□□ -1.19
UBE4B-204ENST00000462658 DGCR2P98153 550 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 TSPY1Q01534 308 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 YWHAHQ04917 246 aaPredicted RBP7.6□□□□□ -1.19
UBE4B-204ENST00000462658 PPIGQ13427 754 aaKnown RBP eCLIP7.6□□□□□ -1.193e-7■■■■□ 19.5
UBE4B-204ENST00000462658 CCDC142Q17RM4 750 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 FLYWCH1Q4VC44 716 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 CCDC157Q569K6 752 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 OR6B2Q6IFH4 312 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 FAM171BQ6P995 826 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 DCUN1D2Q6PH85 259 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 PAQR9Q6ZVX9 377 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 TMEM110Q86TL2 294 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 CAMKK1Q8N5S9 505 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 CEP112Q8N8E3 955 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 MNS1Q8NEH6 495 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 MYRIPQ8NFW9 859 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 MYCBPAPQ8TBZ2 947 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 CPT1CQ8TCG5 803 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 C1GALT1C1Q96EU7 318 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 MCRS1Q96EZ8 462 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 HES6Q96HZ4 224 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 PBKQ96KB5 322 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 CAPZA3Q96KX2 299 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 HSFY1Q96LI6 401 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 MCEEQ96PE7 176 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 PSMB7Q99436 277 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 TEX101Q9BY14 249 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 DUSP16Q9BY84 665 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 B3GNT5Q9BYG0 378 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 LCMT1Q9UIC8 334 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 EYSQ5T1H1 3165 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 PTPRSQ13332 1948 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 TANC1Q9C0D5 1861 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 TTC3P53804 2025 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 SF3B1O75533 1304 aaKnown RBP eCLIP7.59□□□□□ -1.192e-10■■■■■ 68.9
UBE4B-204ENST00000462658 KRTAP4-8A0A0G2JLE6 195 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 F2RL2O00254 374 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 CES2O00748 559 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 XPO1O14980 1071 aaKnown RBP7.59□□□□□ -1.19
UBE4B-204ENST00000462658 SPOPO43791 374 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 PROSCO94903 275 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 SCAF4O95104 1147 aaKnown RBP7.59□□□□□ -1.19
UBE4B-204ENST00000462658 OAZ2O95190 189 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 FAM200BP0CF97 657 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 MGAT1P26572 445 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 RFC1P35251 1148 aaPredicted RBP7.59□□□□□ -1.19
UBE4B-204ENST00000462658 PBX3P40426 434 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 PAFAH1B1P43034 410 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 RPL34P49207 117 aaKnown RBP7.59□□□□□ -1.19
UBE4B-204ENST00000462658 ALDH7A1P49419 539 aaKnown RBP7.59□□□□□ -1.19
UBE4B-204ENST00000462658 MAP3K7CLP57077 242 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 RPL7AP62424 266 aaKnown RBP7.59□□□□□ -1.19
UBE4B-204ENST00000462658 DEFB103AP81534 67 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 FPGSQ05932 587 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 CKAP4Q07065 602 aaKnown RBP7.59□□□□□ -1.19
UBE4B-204ENST00000462658 ELAVL2Q12926 359 aaKnown RBP7.59□□□□□ -1.19
UBE4B-204ENST00000462658 MAPRE1Q15691 268 aaKnown RBP7.59□□□□□ -1.19
UBE4B-204ENST00000462658 PABPC1LQ4VXU2 614 aaKnown RBP7.59□□□□□ -1.19
UBE4B-204ENST00000462658 SPOUT1Q5T280 376 aaKnown RBP7.59□□□□□ -1.19
UBE4B-204ENST00000462658 FAM102AQ5T9C2 384 aaPredicted RBP7.59□□□□□ -1.19
UBE4B-204ENST00000462658 THEMIS2Q5TEJ8 643 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 CCDC181Q5TID7 509 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 FAM171A1Q5VUB5 890 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 FUT10Q6P4F1 479 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 FAM183BPQ6ZVS7 135 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 ZNF365Q70YC5 407 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 TMCO2Q7Z6W1 182 aaPredicted RBP7.59□□□□□ -1.19
UBE4B-204ENST00000462658 CEP57Q86XR8 500 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 UBL4BQ8N7F7 174 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 ZBTB34Q8NCN2 500 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 OR10T2Q8NGX3 314 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 BADQ92934 168 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 ZNF689Q96CS4 500 aaPredicted RBP7.59□□□□□ -1.19
UBE4B-204ENST00000462658 PCED1BQ96HM7 432 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 UBXN6Q9BZV1 441 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 ZNF768Q9H5H4 540 aaKnown RBP7.59□□□□□ -1.19
UBE4B-204ENST00000462658 CWH43Q9H720 699 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 MARCH5Q9NX47 278 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 TRPM5Q9NZQ8 1165 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 RNF14Q9UBS8 474 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 POLHQ9Y253 713 aa7.59□□□□□ -1.19
UBE4B-204ENST00000462658 CHD7Q9P2D1 2997 aa7.59□□□□□ -1.2
UBE4B-204ENST00000462658 TDRD15B5MCY1 1934 aaKnown RBP7.58□□□□□ -1.2
UBE4B-204ENST00000462658 GBF1Q92538 1859 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms