RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 ERI2A8K979 691 aaKnown RBP11.82□□□□□ -0.52
CPNE1-221ENST00000462352 E7EVH7 732 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 PROB1E7EW31 1015 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 SLC31A1O15431 190 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 USP12O75317 370 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 TM7SF2O76062 418 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 PAK4O96013 591 aaPredicted RBP11.82□□□□□ -0.52
CPNE1-221ENST00000462352 FGF1P05230 155 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 PIRTP0C851 137 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 NUDT1P36639 197 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 PTGIRP43119 386 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 VPS41P49754 854 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 BASP1P80723 227 aaKnown RBP11.82□□□□□ -0.52
CPNE1-221ENST00000462352 CREB5Q02930 508 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 CKAP4Q07065 602 aaKnown RBP11.82□□□□□ -0.52
CPNE1-221ENST00000462352 GPS1Q13098 491 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 SGCGQ13326 291 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 ARHGEF7Q14155 803 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 FGL2Q14314 439 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 CDKN3Q16667 212 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 WHAMMP3Q1A5X7 153 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 SETMARQ53H47 684 aaPredicted RBP11.82□□□□□ -0.52
CPNE1-221ENST00000462352 LRRC66Q68CR7 880 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 ZNF572Q7Z3I7 529 aaPredicted RBP11.82□□□□□ -0.52
CPNE1-221ENST00000462352 ASB12Q8WXK4 309 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 PIGKQ92643 395 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 LRRC45Q96CN5 670 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 RUNDC3BQ96NL0 473 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 KRT12Q99456 494 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 MIR1-1HGQ9H1L0 117 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 TMEM74BQ9NUR3 256 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 PILRBQ9UKJ0 227 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 DMTF1Q9Y222 760 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 COQ6Q9Y2Z9 468 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 SPO11Q9Y5K1 396 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 MRFAP1Q9Y605 127 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 SLCO1B1Q9Y6L6 691 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 CEP192Q8TEP8 1941 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 VPS13AQ96RL7 3174 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.81□□□□□ -0.52
CPNE1-221ENST00000462352 C1orf232A0A0U1RR37 186 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 PSMD11O00231 422 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 LZTS3O60299 673 aaPredicted RBP11.81□□□□□ -0.52
CPNE1-221ENST00000462352 SUN1O94901 812 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 CLDN7O95471 211 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 APRTP07741 180 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 RETP07949 1114 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 ZNF30P17039 623 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 GM2AP17900 193 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 HNRNPA2B1P22626 353 aaKnown RBP11.81□□□□□ -0.52
CPNE1-221ENST00000462352 DPP6P42658 865 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 LMAN1P49257 510 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 DR1Q01658 176 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 PTSQ03393 145 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 C2orf54Q08AI8 447 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 PTK6Q13882 451 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 TUBB2AQ13885 445 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 PPP1R7Q15435 360 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 PEAR1Q5VY43 1037 aaPredicted RBP11.81□□□□□ -0.52
CPNE1-221ENST00000462352 DENND2CQ68D51 928 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 NAPEPLDQ6IQ20 393 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 DENND5AQ6IQ26 1287 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 LYSMD3Q7Z3D4 306 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 SYT12Q8IV01 421 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 CBARPQ8N350 705 aaPredicted RBP11.81□□□□□ -0.52
CPNE1-221ENST00000462352 ZCCHC9Q8N567 271 aaKnown RBP11.81□□□□□ -0.52
CPNE1-221ENST00000462352 C1orf216Q8TAB5 229 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 SERAC1Q96JX3 654 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 COQ10AQ96MF6 247 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 MYOCQ99972 504 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 TUBB2BQ9BVA1 445 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 ARRDC1-AS1Q9H2J1 176 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 ARNT2Q9HBZ2 717 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 MAGEE1Q9HCI5 957 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 FZD3Q9NPG1 666 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 EIF2B3Q9NR50 452 aaKnown RBP11.81□□□□□ -0.52
CPNE1-221ENST00000462352 GMEB2Q9UKD1 530 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 SHOC2Q9UQ13 582 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 ZNF711Q9Y462 761 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 PCDHGA5Q9Y5G8 931 aa11.81□□□□□ -0.52
CPNE1-221ENST00000462352 TNRC6BQ9UPQ9 1833 aaKnown RBP11.81□□□□□ -0.52
CPNE1-221ENST00000462352 GON4LQ3T8J9 2241 aa11.8□□□□□ -0.52
CPNE1-221ENST00000462352 GOLGA8CPA6NN73 597 aa11.8□□□□□ -0.52
CPNE1-221ENST00000462352 ESPNB1AK53 854 aa11.8□□□□□ -0.52
CPNE1-221ENST00000462352 PRAMEF26H0Y7S4 382 aa11.8□□□□□ -0.52
CPNE1-221ENST00000462352 WNT9AO14904 365 aa11.8□□□□□ -0.52
CPNE1-221ENST00000462352 RAD51BO15315 384 aa11.8□□□□□ -0.52
CPNE1-221ENST00000462352 TTI1O43156 1089 aa11.8□□□□□ -0.52
CPNE1-221ENST00000462352 ZNF500O60304 480 aaPredicted RBP11.8□□□□□ -0.52
CPNE1-221ENST00000462352 RECQL5O94762 991 aaPredicted RBP11.8□□□□□ -0.52
CPNE1-221ENST00000462352 C1SP09871 688 aa11.8□□□□□ -0.52
CPNE1-221ENST00000462352 AKT2P31751 481 aa11.8□□□□□ -0.52
CPNE1-221ENST00000462352 MPLP40238 635 aa11.8□□□□□ -0.52
CPNE1-221ENST00000462352 STC1P52823 247 aa11.8□□□□□ -0.52
CPNE1-221ENST00000462352 TERF1P54274 439 aa11.8□□□□□ -0.52
CPNE1-221ENST00000462352 DHX34Q14147 1143 aaKnown RBP11.8□□□□□ -0.52
CPNE1-221ENST00000462352 ACOX1Q15067 660 aa11.8□□□□□ -0.52
CPNE1-221ENST00000462352 AGERQ15109 404 aa11.8□□□□□ -0.52
CPNE1-221ENST00000462352 HSD11B1LQ7Z5J1 315 aa11.8□□□□□ -0.52
CPNE1-221ENST00000462352 LINC00523Q86TU6 105 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms