RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 FUBP1Q96AE4 644 aaKnown RBP17.94■□□□□ 0.46
SSB-206ENST00000461708 CCDC74AQ96AQ1 378 aa17.94■□□□□ 0.46
SSB-206ENST00000461708 GFM1Q96RP9 751 aaKnown RBP17.94■□□□□ 0.46
SSB-206ENST00000461708 TRIM7Q9C029 511 aa17.94■□□□□ 0.46
SSB-206ENST00000461708 STRADBQ9C0K7 418 aa17.94■□□□□ 0.46
SSB-206ENST00000461708 ISCUQ9H1K1 167 aa17.94■□□□□ 0.46
SSB-206ENST00000461708 ASH1LQ9NR48 2969 aaKnown RBP17.94■□□□□ 0.46
SSB-206ENST00000461708 APPL1Q9UKG1 709 aa17.94■□□□□ 0.46
SSB-206ENST00000461708 PCDHGA7Q9Y5G6 932 aa17.94■□□□□ 0.46
SSB-206ENST00000461708 A0A1B0GTH6 734 aa17.93■□□□□ 0.46
SSB-206ENST00000461708 D6RAR5 112 aa17.93■□□□□ 0.46
SSB-206ENST00000461708 H3BRJ5 948 aa17.93■□□□□ 0.46
SSB-206ENST00000461708 HTRA2O43464 458 aaPredicted RBP17.93■□□□□ 0.46
SSB-206ENST00000461708 TNFSF15O95150 251 aa17.93■□□□□ 0.46
SSB-206ENST00000461708 PRKCGP05129 697 aa17.93■□□□□ 0.46
SSB-206ENST00000461708 GLB1P16278 677 aa17.93■□□□□ 0.46
SSB-206ENST00000461708 NFKBIAP25963 317 aa17.93■□□□□ 0.46
SSB-206ENST00000461708 CCKBRP32239 447 aa17.93■□□□□ 0.46
SSB-206ENST00000461708 SCNN1BP51168 640 aa17.93■□□□□ 0.46
SSB-206ENST00000461708 KLHL30Q0D2K2 578 aa17.93■□□□□ 0.46
SSB-206ENST00000461708 LBRQ14739 615 aaKnown RBP17.93■□□□□ 0.46
SSB-206ENST00000461708 RALGPS1Q5JS13 557 aa17.93■□□□□ 0.46
SSB-206ENST00000461708 E4F1Q66K89 784 aaPredicted RBP17.93■□□□□ 0.46
SSB-206ENST00000461708 ARHGAP36Q6ZRI8 547 aa17.93■□□□□ 0.46
SSB-206ENST00000461708 OR1E3Q8WZA6 343 aa17.93■□□□□ 0.46
SSB-206ENST00000461708 ZNF653Q96CK0 615 aa17.93■□□□□ 0.46
SSB-206ENST00000461708 PDXPQ96GD0 296 aa17.93■□□□□ 0.46
SSB-206ENST00000461708 CPNE5Q9HCH3 593 aa17.93■□□□□ 0.46
SSB-206ENST00000461708 RABGEF1Q9UJ41 708 aa17.93■□□□□ 0.46
SSB-206ENST00000461708 ACSL6Q9UKU0 697 aa17.93■□□□□ 0.46
SSB-206ENST00000461708 TMEM202A6NGA9 273 aa17.92■□□□□ 0.46
SSB-206ENST00000461708 PLD2O14939 933 aa17.92■□□□□ 0.46
SSB-206ENST00000461708 PEX11BO96011 259 aa17.92■□□□□ 0.46
SSB-206ENST00000461708 PRB1P04280 392 aa17.92■□□□□ 0.46
SSB-206ENST00000461708 GM2AP17900 193 aa17.92■□□□□ 0.46
SSB-206ENST00000461708 CR2P20023 1033 aa17.92■□□□□ 0.46
SSB-206ENST00000461708 ARL4AP40617 200 aa17.92■□□□□ 0.46
SSB-206ENST00000461708 SLC10A7Q0GE19 358 aa17.92■□□□□ 0.46
SSB-206ENST00000461708 TSR1Q2NL82 804 aaKnown RBP17.92■□□□□ 0.46
SSB-206ENST00000461708 FIGNQ5HY92 759 aa17.92■□□□□ 0.46
SSB-206ENST00000461708 CERCAMQ5T4B2 595 aa17.92■□□□□ 0.46
SSB-206ENST00000461708 PNCKQ6P2M8 343 aa17.92■□□□□ 0.46
SSB-206ENST00000461708 TMEM159Q96B96 161 aa17.92■□□□□ 0.46
SSB-206ENST00000461708 COQ10AQ96MF6 247 aa17.92■□□□□ 0.46
SSB-206ENST00000461708 TMEM74Q96NL1 305 aa17.92■□□□□ 0.46
SSB-206ENST00000461708 WDR26Q9H7D7 661 aa17.92■□□□□ 0.46
SSB-206ENST00000461708 FGF22Q9HCT0 170 aa17.92■□□□□ 0.46
SSB-206ENST00000461708 SIRPGQ9P1W8 387 aa17.92■□□□□ 0.46
SSB-206ENST00000461708 A0A1W2PQM1 296 aa17.91■□□□□ 0.46
SSB-206ENST00000461708 CASC3O15234 703 aaKnown RBP17.91■□□□□ 0.46
SSB-206ENST00000461708 RPLP0P05388 317 aaKnown RBP17.91■□□□□ 0.46
SSB-206ENST00000461708 CCL7P80098 99 aa17.91■□□□□ 0.46
SSB-206ENST00000461708 PIGHQ14442 188 aaPredicted RBP17.91■□□□□ 0.46
SSB-206ENST00000461708 ZNF235Q14590 738 aa17.91■□□□□ 0.46
SSB-206ENST00000461708 ARHGAP40Q5TG30 622 aa17.91■□□□□ 0.46
SSB-206ENST00000461708 KCTD16Q68DU8 428 aa17.91■□□□□ 0.46
SSB-206ENST00000461708 TMCO3Q6UWJ1 677 aa17.91■□□□□ 0.46
SSB-206ENST00000461708 POLNQ7Z5Q5 900 aa17.91■□□□□ 0.46
SSB-206ENST00000461708 B3GNT8Q7Z7M8 397 aa17.91■□□□□ 0.46
SSB-206ENST00000461708 CBARPQ8N350 705 aaPredicted RBP17.91■□□□□ 0.46
SSB-206ENST00000461708 ZNF843Q8N446 348 aa17.91■□□□□ 0.46
SSB-206ENST00000461708 PAF1Q8N7H5 531 aa17.91■□□□□ 0.46
SSB-206ENST00000461708 TEKT4Q8WW24 435 aa17.91■□□□□ 0.46
SSB-206ENST00000461708 NSMCE3Q96MG7 304 aa17.91■□□□□ 0.46
SSB-206ENST00000461708 NUDCD1Q96RS6 583 aa17.91■□□□□ 0.46
SSB-206ENST00000461708 MGME1Q9BQP7 344 aa17.91■□□□□ 0.46
SSB-206ENST00000461708 LRRN3Q9H3W5 708 aa17.91■□□□□ 0.46
SSB-206ENST00000461708 TMEM63CQ9P1W3 806 aa17.91■□□□□ 0.46
SSB-206ENST00000461708 B4GALT6Q9UBX8 382 aa17.91■□□□□ 0.46
SSB-206ENST00000461708 TENM4Q6N022 2769 aa17.91■□□□□ 0.46
SSB-206ENST00000461708 SPTA1P02549 2419 aa17.91■□□□□ 0.46
SSB-206ENST00000461708 SCN8AQ9UQD0 1980 aa17.9■□□□□ 0.46
SSB-206ENST00000461708 PMS2P1A4D2B8 440 aa17.9■□□□□ 0.46
SSB-206ENST00000461708 K7ENP7 123 aa17.9■□□□□ 0.46
SSB-206ENST00000461708 PSMD11O00231 422 aa17.9■□□□□ 0.46
SSB-206ENST00000461708 NUDT21O43809 227 aaKnown RBP17.9■□□□□ 0.46
SSB-206ENST00000461708 NOBOXO60393 691 aa17.9■□□□□ 0.46
SSB-206ENST00000461708 IL1R2P27930 398 aa17.9■□□□□ 0.46
SSB-206ENST00000461708 TEAD1P28347 426 aa17.9■□□□□ 0.46
SSB-206ENST00000461708 INHBCP55103 352 aa17.9■□□□□ 0.46
SSB-206ENST00000461708 CDH6P55285 790 aa17.9■□□□□ 0.46
SSB-206ENST00000461708 CFHR1Q03591 330 aa17.9■□□□□ 0.46
SSB-206ENST00000461708 NR1I3Q14994 352 aa17.9■□□□□ 0.46
SSB-206ENST00000461708 ACOX1Q15067 660 aa17.9■□□□□ 0.46
SSB-206ENST00000461708 C14orf28Q4W4Y0 310 aa17.9■□□□□ 0.46
SSB-206ENST00000461708 INO80CQ6PI98 192 aaPredicted RBP17.9■□□□□ 0.46
SSB-206ENST00000461708 NYAP1Q6ZVC0 841 aa17.9■□□□□ 0.46
SSB-206ENST00000461708 RAB11FIP2Q7L804 512 aa17.9■□□□□ 0.46
SSB-206ENST00000461708 TAF8Q7Z7C8 310 aa17.9■□□□□ 0.46
SSB-206ENST00000461708 LRRC49Q8IUZ0 686 aa17.9■□□□□ 0.46
SSB-206ENST00000461708 CCNJLQ8IV13 435 aa17.9■□□□□ 0.46
SSB-206ENST00000461708 TP53INP2Q8IXH6 220 aa17.9■□□□□ 0.46
SSB-206ENST00000461708 BBS5Q8N3I7 341 aa17.9■□□□□ 0.46
SSB-206ENST00000461708 FBXO39Q8N4B4 442 aa17.9■□□□□ 0.46
SSB-206ENST00000461708 NIPA2Q8N8Q9 360 aa17.9■□□□□ 0.46
SSB-206ENST00000461708 FAM46DQ8NEK8 389 aa17.9■□□□□ 0.46
SSB-206ENST00000461708 SYN2Q92777 582 aaPredicted RBP17.9■□□□□ 0.46
SSB-206ENST00000461708 CSPG4P5Q96PW8 444 aa17.9■□□□□ 0.46
SSB-206ENST00000461708 SYNDIG1Q9H7V2 258 aa17.9■□□□□ 0.46
SSB-206ENST00000461708 PHTF1Q9UMS5 762 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms