RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 MARCKSL1P49006 195 aa15.44■□□□□ 0.06
VARS-219ENST00000461328 EPHB1P54762 984 aa15.44■□□□□ 0.06
VARS-219ENST00000461328 PPIDQ08752 370 aaKnown RBP15.44■□□□□ 0.06
VARS-219ENST00000461328 RALGDSQ12967 914 aa15.44■□□□□ 0.06
VARS-219ENST00000461328 ACOX1Q15067 660 aa15.44■□□□□ 0.06
VARS-219ENST00000461328 WSCD2Q2TBF2 565 aa15.44■□□□□ 0.06
VARS-219ENST00000461328 HES3Q5TGS1 186 aa15.44■□□□□ 0.06
VARS-219ENST00000461328 DENND2CQ68D51 928 aa15.44■□□□□ 0.06
VARS-219ENST00000461328 SPOCD1Q6ZMY3 1216 aa15.44■□□□□ 0.06
VARS-219ENST00000461328 MACC1Q6ZN28 852 aa15.44■□□□□ 0.06
VARS-219ENST00000461328 NDUFAF2Q8N183 169 aa15.44■□□□□ 0.06
VARS-219ENST00000461328 LMX1AQ8TE12 382 aa15.44■□□□□ 0.06
VARS-219ENST00000461328 FATE1Q969F0 183 aa15.44■□□□□ 0.06
VARS-219ENST00000461328 RBM41Q96IZ5 413 aaKnown RBP15.44■□□□□ 0.06
VARS-219ENST00000461328 CALR3Q96L12 384 aaKnown RBP15.44■□□□□ 0.06
VARS-219ENST00000461328 NSMCE3Q96MG7 304 aa15.44■□□□□ 0.06
VARS-219ENST00000461328 EVA1BQ9NVM1 165 aa15.44■□□□□ 0.06
VARS-219ENST00000461328 SPASTQ9UBP0 616 aa15.44■□□□□ 0.06
VARS-219ENST00000461328 APOBEC3BQ9UH17 382 aaKnown RBP15.44■□□□□ 0.06
VARS-219ENST00000461328 AMACRQ9UHK6 382 aa15.44■□□□□ 0.06
VARS-219ENST00000461328 KLF15Q9UIH9 416 aa15.44■□□□□ 0.06
VARS-219ENST00000461328 PHTF1Q9UMS5 762 aa15.44■□□□□ 0.06
VARS-219ENST00000461328 REXO2Q9Y3B8 237 aaKnown RBP15.44■□□□□ 0.06
VARS-219ENST00000461328 CSNK1G3Q9Y6M4 447 aa15.44■□□□□ 0.06
VARS-219ENST00000461328 RCCD1A6NED2 376 aa15.43■□□□□ 0.06
VARS-219ENST00000461328 TRABD2BA6NFA1 517 aa15.43■□□□□ 0.06
VARS-219ENST00000461328 SRRM3A6NNA2 597 aaPredicted RBP15.43■□□□□ 0.06
VARS-219ENST00000461328 CST8O60676 142 aa15.43■□□□□ 0.06
VARS-219ENST00000461328 RECQL5O94762 991 aaPredicted RBP15.43■□□□□ 0.06
VARS-219ENST00000461328 ZRANB2O95218 330 aaKnown RBP eCLIP15.43■□□□□ 0.06
VARS-219ENST00000461328 CKMT1AP12532 417 aa15.43■□□□□ 0.06
VARS-219ENST00000461328 CTPS1P17812 591 aa15.43■□□□□ 0.06
VARS-219ENST00000461328 CES1P23141 567 aa15.43■□□□□ 0.06
VARS-219ENST00000461328 VIPR1P32241 457 aa15.43■□□□□ 0.06
VARS-219ENST00000461328 ARHGEF7Q14155 803 aa15.43■□□□□ 0.06
VARS-219ENST00000461328 TFDP3Q5H9I0 405 aa15.43■□□□□ 0.06
VARS-219ENST00000461328 FAXCQ5TGI0 409 aa15.43■□□□□ 0.06
VARS-219ENST00000461328 CCDC181Q5TID7 509 aa15.43■□□□□ 0.06
VARS-219ENST00000461328 LIPIQ6XZB0 460 aa15.43■□□□□ 0.06
VARS-219ENST00000461328 BZW1Q7L1Q6 419 aaKnown RBP15.43■□□□□ 0.06
VARS-219ENST00000461328 PROSER1Q86XN7 944 aa15.43■□□□□ 0.06
VARS-219ENST00000461328 KATNAL2Q8IYT4 538 aa15.43■□□□□ 0.06
VARS-219ENST00000461328 PHACTR4Q8IZ21 702 aa15.43■□□□□ 0.06
VARS-219ENST00000461328 RBFAQ8N0V3 343 aa15.43■□□□□ 0.06
VARS-219ENST00000461328 PDCD7Q8N8D1 485 aaKnown RBP15.43■□□□□ 0.06
VARS-219ENST00000461328 MDM1Q8TC05 714 aa15.43■□□□□ 0.06
VARS-219ENST00000461328 APOLD1Q96LR9 279 aa15.43■□□□□ 0.06
VARS-219ENST00000461328 DESI2Q9BSY9 194 aa15.43■□□□□ 0.06
VARS-219ENST00000461328 SLC13A1Q9BZW2 595 aa15.43■□□□□ 0.06
VARS-219ENST00000461328 SALL4Q9UJQ4 1053 aa15.43■□□□□ 0.06
VARS-219ENST00000461328 TDRD6O60522 2096 aaKnown RBP15.43■□□□□ 0.06
VARS-219ENST00000461328 ANKRD36A6QL64 1941 aa15.43■□□□□ 0.06
VARS-219ENST00000461328 MACROD2A1Z1Q3 448 aa15.42■□□□□ 0.06
VARS-219ENST00000461328 CFAP69A5D8W1 941 aa15.42■□□□□ 0.06
VARS-219ENST00000461328 CAPNS1P04632 268 aa15.42■□□□□ 0.06
VARS-219ENST00000461328 MYF5P13349 255 aa15.42■□□□□ 0.06
VARS-219ENST00000461328 TGM2P21980 687 aa15.42■□□□□ 0.06
VARS-219ENST00000461328 HTR1BP28222 390 aa15.42■□□□□ 0.06
VARS-219ENST00000461328 PEX5P50542 639 aa15.42■□□□□ 0.06
VARS-219ENST00000461328 DUSP3P51452 185 aaPredicted RBP15.42■□□□□ 0.06
VARS-219ENST00000461328 IFI35P80217 286 aaPredicted RBP15.42■□□□□ 0.06
VARS-219ENST00000461328 E2F1Q01094 437 aa15.42■□□□□ 0.06
VARS-219ENST00000461328 PPARDQ03181 441 aa15.42■□□□□ 0.06
VARS-219ENST00000461328 ZBTB17Q13105 803 aa15.42■□□□□ 0.06
VARS-219ENST00000461328 TARDBPQ13148 414 aaKnown RBP eCLIP15.42■□□□□ 0.06
VARS-219ENST00000461328 CAMK2BQ13554 666 aa15.42■□□□□ 0.06
VARS-219ENST00000461328 INPP5AQ14642 412 aa15.42■□□□□ 0.06
VARS-219ENST00000461328 NFATC4Q14934 902 aa15.42■□□□□ 0.06
VARS-219ENST00000461328 AGERQ15109 404 aa15.42■□□□□ 0.06
VARS-219ENST00000461328 DEFB133Q30KQ1 61 aa15.42■□□□□ 0.06
VARS-219ENST00000461328 PRRT3Q5FWE3 981 aa15.42■□□□□ 0.06
VARS-219ENST00000461328 ALG1LQ6GMV1 187 aa15.42■□□□□ 0.06
VARS-219ENST00000461328 ZCCHC8Q6NZY4 707 aaKnown RBP15.42■□□□□ 0.06
VARS-219ENST00000461328 TMEM139Q8IV31 216 aa15.42■□□□□ 0.06
VARS-219ENST00000461328 RCOR2Q8IZ40 523 aa15.42■□□□□ 0.06
VARS-219ENST00000461328 FAM181AQ8N9Y4 354 aa15.42■□□□□ 0.06
VARS-219ENST00000461328 KRT35Q92764 455 aa15.42■□□□□ 0.06
VARS-219ENST00000461328 HAUS1Q96CS2 278 aa15.42■□□□□ 0.06
VARS-219ENST00000461328 NUS1Q96E22 293 aa15.42■□□□□ 0.06
VARS-219ENST00000461328 OLFM3Q96PB7 478 aa15.42■□□□□ 0.06
VARS-219ENST00000461328 IL12RB2Q99665 862 aa15.42■□□□□ 0.06
VARS-219ENST00000461328 CEP41Q9BYV8 373 aa15.42■□□□□ 0.06
VARS-219ENST00000461328 LACRTQ9GZZ8 138 aa15.42■□□□□ 0.06
VARS-219ENST00000461328 BRD8Q9H0E9 1235 aa15.42■□□□□ 0.06
VARS-219ENST00000461328 TCEAL2Q9H3H9 227 aaPredicted RBP15.42■□□□□ 0.06
VARS-219ENST00000461328 DUSP10Q9Y6W6 482 aa15.42■□□□□ 0.06
VARS-219ENST00000461328 ARID1BQ8NFD5 2236 aaPredicted RBP15.41■□□□□ 0.06
VARS-219ENST00000461328 hCG_1818297A0A087WSY0 165 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 GOLGA6CA6NDK9 693 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 GOLGA6BA6NDN3 693 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 NPIPB15A6NHN6 443 aaPredicted RBP15.41■□□□□ 0.06
VARS-219ENST00000461328 BTNL10A8MVZ5 291 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 TAF4O00268 1085 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 HEXIM1O94992 359 aaKnown RBP15.41■□□□□ 0.06
VARS-219ENST00000461328 ALPIP09923 528 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 GOLGA6DP0CG33 693 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 CD86P42081 329 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 NR2C2P49116 596 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 BLKP51451 505 aa15.41■□□□□ 0.06
VARS-219ENST00000461328 GSDMDP57764 484 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms