RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 NR2F1P10589 423 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 RARGP13631 454 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 ETFAP13804 333 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 DDX5P17844 614 aaKnown RBP3.92□□□□□ -1.78
CLK1-206ENST00000461326 TBXAS1P24557 533 aaPredicted RBP3.92□□□□□ -1.78
CLK1-206ENST00000461326 CCKARP32238 428 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 UBA7P41226 1012 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 GARSP41250 739 aaKnown RBP3.92□□□□□ -1.78
CLK1-206ENST00000461326 PIK3CAP42336 1068 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 F2RL1P55085 397 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 CEBPZQ03701 1054 aaKnown RBP3.92□□□□□ -1.78
CLK1-206ENST00000461326 STK4Q13043 487 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 MTX1Q13505 466 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 LPIN1Q14693 890 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 ESCO2Q56NI9 601 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 CXorf66Q5JRM2 361 aaPredicted RBP3.92□□□□□ -1.78
CLK1-206ENST00000461326 RAB41Q5JT25 222 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 Q5PR19 223 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 GKAP1Q5VSY0 366 aaPredicted RBP3.92□□□□□ -1.78
CLK1-206ENST00000461326 PLEKHA7Q6IQ23 1121 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 CES5AQ6NT32 575 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 LCTLQ6UWM7 567 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 TDRPQ86YL5 185 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 CEP76Q8TAP6 659 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 LPAR1Q92633 364 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 SEPT5Q99719 369 aaPredicted RBP3.92□□□□□ -1.78
CLK1-206ENST00000461326 FAM110AQ9BQ89 295 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 IFIH1Q9BYX4 1025 aaKnown RBP3.92□□□□□ -1.78
CLK1-206ENST00000461326 PDZD7Q9H5P4 517 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 MAP6D1Q9H9H5 199 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 POLR1BQ9H9Y6 1135 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 ANKEF1Q9NU02 776 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 SUCLA2Q9P2R7 463 aaPredicted RBP3.92□□□□□ -1.78
CLK1-206ENST00000461326 PLEKHB1Q9UF11 243 aaPredicted RBP3.92□□□□□ -1.78
CLK1-206ENST00000461326 CHORDC1Q9UHD1 332 aaPredicted RBP3.92□□□□□ -1.78
CLK1-206ENST00000461326 PCDHA12Q9UN75 941 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 ERVK-11Q9UQG0 969 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 MAU2Q9Y6X3 613 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 IGKV2D-30A0A075B6S6 120 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 MYMKA6NI61 221 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 A6NNC1 897 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 KCNU1A8MYU2 1149 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 ZNF814B7Z6K7 855 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 STMND1H3BQB6 276 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 CHL1O00533 1208 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 HS6ST1O60243 411 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 KLK8O60259 260 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 ATG13O75143 517 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 FGBP02675 491 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 SRPRAP08240 638 aaKnown RBP3.91□□□□□ -1.78
CLK1-206ENST00000461326 CHRNB2P17787 502 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 EDN2P20800 178 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 SAT1P21673 171 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 ACTN2P35609 894 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 NNMTP40261 264 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 NR4A2P43354 598 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 CLCN5P51795 746 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 ACSM2AQ08AH3 577 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 GRIK3Q13003 919 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 ARHGEF6Q15052 776 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 NTRK2Q16620 822 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 DUSP6Q16828 381 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 SUPT20HL1Q3ZLR7 823 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 FAM133BQ5BKY9 247 aaKnown RBP3.91□□□□□ -1.78
CLK1-206ENST00000461326 PRAMEF19Q5SWL8 479 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 ACSM2BQ68CK6 577 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 PARM1Q6UWI2 310 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 TMCO3Q6UWJ1 677 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 SEPT14Q6ZU15 432 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 ADGRA1Q86SQ6 560 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 PALB2Q86YC2 1186 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 EPHX4Q8IUS5 362 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 C17orf53Q8N3J3 647 aaPredicted RBP3.91□□□□□ -1.78
CLK1-206ENST00000461326 PARP16Q8N5Y8 322 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 ARFGAP1Q8N6T3 406 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 C16orf52Q8NHV5 167 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 HUS1BQ8NHY5 278 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 GABPB2Q8TAK5 448 aaPredicted RBP3.91□□□□□ -1.78
CLK1-206ENST00000461326 PABPC5Q96DU9 382 aaKnown RBP3.91□□□□□ -1.78
CLK1-206ENST00000461326 SLC41A2Q96JW4 573 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 WDFY2Q96P53 400 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 WDR77Q9BQA1 342 aaPredicted RBP3.91□□□□□ -1.78
CLK1-206ENST00000461326 MMTAG2Q9BU76 263 aaKnown RBP3.91□□□□□ -1.78
CLK1-206ENST00000461326 QTRT1Q9BXR0 403 aaKnown RBP3.91□□□□□ -1.78
CLK1-206ENST00000461326 MRPL1Q9BYD6 325 aaKnown RBP3.91□□□□□ -1.78
CLK1-206ENST00000461326 LHPPQ9H008 270 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 EBF3Q9H4W6 596 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 TUBA8Q9NY65 449 aaPredicted RBP3.91□□□□□ -1.78
CLK1-206ENST00000461326 CWC15Q9P013 229 aaKnown RBP3.91□□□□□ -1.78
CLK1-206ENST00000461326 CTNNAL1Q9UBT7 734 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.91□□□□□ -1.78
CLK1-206ENST00000461326 RPS6KL1Q9Y6S9 549 aa3.91□□□□□ -1.78
CLK1-206ENST00000461326 AKR1B15C9JRZ8 316 aaPredicted RBP3.9□□□□□ -1.79
CLK1-206ENST00000461326 WNT9BO14905 357 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 CLTBP09497 229 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 CHRNB1P11230 501 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 ITGAXP20702 1163 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 GNLYP22749 145 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 GCH1P30793 250 aa3.9□□□□□ -1.79
CLK1-206ENST00000461326 HOXC9P31274 260 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms