RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 ALG3Q92685 438 aa20.8■□□□□ 0.92
VARS-218ENST00000459667 AGAP3Q96P47 875 aa20.8■□□□□ 0.92
VARS-218ENST00000459667 PPIL1Q9Y3C6 166 aa20.8■□□□□ 0.92
VARS-218ENST00000459667 ADGRG1Q9Y653 693 aa20.8■□□□□ 0.92
VARS-218ENST00000459667 COL5A1P20908 1838 aaPredicted RBP20.8■□□□□ 0.92
VARS-218ENST00000459667 TDRD6O60522 2096 aaKnown RBP20.79■□□□□ 0.92
VARS-218ENST00000459667 H3BM21 787 aa20.79■□□□□ 0.92
VARS-218ENST00000459667 TNFSF14O43557 240 aa20.79■□□□□ 0.92
VARS-218ENST00000459667 KRT86O43790 486 aa20.79■□□□□ 0.92
VARS-218ENST00000459667 PIAS2O75928 621 aa20.79■□□□□ 0.92
VARS-218ENST00000459667 CSF2P04141 144 aa20.79■□□□□ 0.92
VARS-218ENST00000459667 MMP2P08253 660 aa20.79■□□□□ 0.92
VARS-218ENST00000459667 ALPIP09923 528 aa20.79■□□□□ 0.92
VARS-218ENST00000459667 NME1P15531 152 aaKnown RBP20.79■□□□□ 0.92
VARS-218ENST00000459667 GM2AP17900 193 aa20.79■□□□□ 0.92
VARS-218ENST00000459667 LHCGRP22888 699 aa20.79■□□□□ 0.92
VARS-218ENST00000459667 DGKAP23743 735 aa20.79■□□□□ 0.92
VARS-218ENST00000459667 SKOR1P84550 965 aa20.79■□□□□ 0.92
VARS-218ENST00000459667 ARHGEF7Q14155 803 aa20.79■□□□□ 0.92
VARS-218ENST00000459667 CCDC181Q5TID7 509 aa20.79■□□□□ 0.92
VARS-218ENST00000459667 DENND2CQ68D51 928 aa20.79■□□□□ 0.92
VARS-218ENST00000459667 MACC1Q6ZN28 852 aa20.79■□□□□ 0.92
VARS-218ENST00000459667 COQ10AQ96MF6 247 aa20.79■□□□□ 0.92
VARS-218ENST00000459667 CAAP1Q9H8G2 361 aa20.79■□□□□ 0.92
VARS-218ENST00000459667 PCDH9Q9HC56 1237 aa20.79■□□□□ 0.92
VARS-218ENST00000459667 APOBEC2Q9Y235 224 aaKnown RBP20.79■□□□□ 0.92
VARS-218ENST00000459667 A0A0J9YYE9 177 aa20.78■□□□□ 0.92
VARS-218ENST00000459667 GOLGA8CPA6NN73 597 aa20.78■□□□□ 0.92
VARS-218ENST00000459667 APOC4-APOC2K7ER74 178 aa20.78■□□□□ 0.92
VARS-218ENST00000459667 FTCDO95954 541 aa20.78■□□□□ 0.92
VARS-218ENST00000459667 TRBC1P01850 177 aa20.78■□□□□ 0.92
VARS-218ENST00000459667 APOC2P02655 101 aa20.78■□□□□ 0.92
VARS-218ENST00000459667 CCDC175P0C221 793 aa20.78■□□□□ 0.92
VARS-218ENST00000459667 PTPN3P26045 913 aa20.78■□□□□ 0.92
VARS-218ENST00000459667 PTPN7P35236 360 aa20.78■□□□□ 0.92
VARS-218ENST00000459667 CETN2P41208 172 aa20.78■□□□□ 0.92
VARS-218ENST00000459667 HNRNPKP61978 463 aaKnown RBP eCLIP20.78■□□□□ 0.92
VARS-218ENST00000459667 EIF2B5Q13144 721 aaKnown RBP20.78■□□□□ 0.92
VARS-218ENST00000459667 MTM1Q13496 603 aa20.78■□□□□ 0.92
VARS-218ENST00000459667 INPP5AQ14642 412 aa20.78■□□□□ 0.92
VARS-218ENST00000459667 PTPRRQ15256 657 aa20.78■□□□□ 0.92
VARS-218ENST00000459667 TEX44Q53QW1 395 aa20.78■□□□□ 0.92
VARS-218ENST00000459667 TSPAN33Q86UF1 283 aa20.78■□□□□ 0.92
VARS-218ENST00000459667 RNF10Q8N5U6 811 aaKnown RBP20.78■□□□□ 0.92
VARS-218ENST00000459667 PLA2G15Q8NCC3 412 aa20.78■□□□□ 0.92
VARS-218ENST00000459667 LPCAT1Q8NF37 534 aa20.78■□□□□ 0.92
VARS-218ENST00000459667 NUS1Q96E22 293 aa20.78■□□□□ 0.92
VARS-218ENST00000459667 CNDP2Q96KP4 475 aaKnown RBP20.78■□□□□ 0.92
VARS-218ENST00000459667 HERPUD2Q9BSE4 406 aa20.78■□□□□ 0.92
VARS-218ENST00000459667 APOOQ9BUR5 198 aa20.78■□□□□ 0.92
VARS-218ENST00000459667 OSBPL8Q9BZF1 889 aa20.78■□□□□ 0.92
VARS-218ENST00000459667 UCKL1Q9NWZ5 548 aa20.78■□□□□ 0.92
VARS-218ENST00000459667 ANGPTL2Q9UKU9 493 aa20.78■□□□□ 0.92
VARS-218ENST00000459667 PACSIN2Q9UNF0 486 aaPredicted RBP20.78■□□□□ 0.92
VARS-218ENST00000459667 EFR3BQ9Y2G0 817 aa20.78■□□□□ 0.92
VARS-218ENST00000459667 CAPN6Q9Y6Q1 641 aa20.78■□□□□ 0.92
VARS-218ENST00000459667 CAPN8A6NHC0 703 aa20.77■□□□□ 0.92
VARS-218ENST00000459667 MIF4GDA9UHW6 222 aaKnown RBP20.77■□□□□ 0.92
VARS-218ENST00000459667 PSMD11O00231 422 aa20.77■□□□□ 0.92
VARS-218ENST00000459667 MTSS1O43312 755 aa20.77■□□□□ 0.92
VARS-218ENST00000459667 TRIM16O95361 564 aa20.77■□□□□ 0.92
VARS-218ENST00000459667 LDOC1O95751 146 aaPredicted RBP20.77■□□□□ 0.92
VARS-218ENST00000459667 PRLP01236 227 aa20.77■□□□□ 0.92
VARS-218ENST00000459667 ATXN1LP0C7T5 689 aaKnown RBP20.77■□□□□ 0.92
VARS-218ENST00000459667 HNF1BP35680 557 aa20.77■□□□□ 0.92
VARS-218ENST00000459667 RPL26P61254 145 aaKnown RBP20.77■□□□□ 0.92
VARS-218ENST00000459667 SLC25A45Q8N413 288 aa20.77■□□□□ 0.92
VARS-218ENST00000459667 UBL4BQ8N7F7 174 aa20.77■□□□□ 0.92
VARS-218ENST00000459667 IMP4Q96G21 291 aaKnown RBP20.77■□□□□ 0.92
VARS-218ENST00000459667 QKIQ96PU8 341 aaKnown RBP eCLIP20.77■□□□□ 0.92
VARS-218ENST00000459667 SMIM14Q96QK8 99 aa20.77■□□□□ 0.92
VARS-218ENST00000459667 RBM15Q96T37 977 aaKnown RBP eCLIP20.77■□□□□ 0.92
VARS-218ENST00000459667 SLC25A51Q9H1U9 297 aa20.77■□□□□ 0.92
VARS-218ENST00000459667 KCTD5Q9NXV2 234 aa20.77■□□□□ 0.92
VARS-218ENST00000459667 KLF15Q9UIH9 416 aa20.77■□□□□ 0.92
VARS-218ENST00000459667 GUCA1BQ9UMX6 200 aa20.77■□□□□ 0.92
VARS-218ENST00000459667 RPL26L1Q9UNX3 145 aaKnown RBP20.77■□□□□ 0.92
VARS-218ENST00000459667 OR1A2Q9Y585 309 aa20.77■□□□□ 0.92
VARS-218ENST00000459667 HACD1B0YJ81 288 aa20.76■□□□□ 0.91
VARS-218ENST00000459667 FFAR2O15552 330 aa20.76■□□□□ 0.91
VARS-218ENST00000459667 PYGMP11217 842 aa20.76■□□□□ 0.91
VARS-218ENST00000459667 JUNDP17535 347 aa20.76■□□□□ 0.91
VARS-218ENST00000459667 HTR1BP28222 390 aa20.76■□□□□ 0.91
VARS-218ENST00000459667 ETV3P41162 512 aa20.76■□□□□ 0.91
VARS-218ENST00000459667 NFATC4Q14934 902 aa20.76■□□□□ 0.91
VARS-218ENST00000459667 NOMO1Q15155 1222 aa20.76■□□□□ 0.91
VARS-218ENST00000459667 LRRC66Q68CR7 880 aa20.76■□□□□ 0.91
VARS-218ENST00000459667 ESRP1Q6NXG1 681 aaKnown RBP20.76■□□□□ 0.91
VARS-218ENST00000459667 AADACL2Q6P093 401 aa20.76■□□□□ 0.91
VARS-218ENST00000459667 CRTC1Q6UUV9 634 aa20.76■□□□□ 0.91
VARS-218ENST00000459667 HSD11B1LQ7Z5J1 315 aa20.76■□□□□ 0.91
VARS-218ENST00000459667 SLCO6A1Q86UG4 719 aa20.76■□□□□ 0.91
VARS-218ENST00000459667 PNPLA1Q8N8W4 532 aa20.76■□□□□ 0.91
VARS-218ENST00000459667 ZNF548Q8NEK5 533 aaPredicted RBP20.76■□□□□ 0.91
VARS-218ENST00000459667 DTD2Q96FN9 168 aa20.76■□□□□ 0.91
VARS-218ENST00000459667 TEKT5Q96M29 485 aa20.76■□□□□ 0.91
VARS-218ENST00000459667 GLOD4Q9HC38 313 aa20.76■□□□□ 0.91
VARS-218ENST00000459667 TOR4AQ9NXH8 423 aa20.76■□□□□ 0.91
VARS-218ENST00000459667 DNPEPQ9ULA0 475 aa20.76■□□□□ 0.91
VARS-218ENST00000459667 A0A0U1RQS6 177 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms