RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 MPPE1Q53F39 396 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 VWA5B1Q5TIE3 1220 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 ZNF655Q8N720 491 aaPredicted RBP19.7■□□□□ 0.74
SNX27-204ENST00000458013 ZNF563Q8TA94 476 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 ZNF304Q9HCX3 659 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 ARL8BQ9NVJ2 186 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 RGSL1A5PLK6 1076 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 CCL22O00626 93 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 MYL9P24844 172 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 MRPS6P82932 125 aaKnown RBP19.7■□□□□ 0.74
SNX27-204ENST00000458013 PLPP4Q5VZY2 271 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 IL31RAQ8NI17 732 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 KAT2AQ92830 837 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 ATP13A3Q9H7F0 1226 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 NKIRAS2Q9NYR9 191 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 TNPO3Q9Y5L0 923 aaKnown RBP19.7■□□□□ 0.74
SNX27-204ENST00000458013 SCGNO76038 276 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 TMEM63BQ5T3F8 832 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 NT5DC1Q5TFE4 455 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 OR52J3Q8NH60 311 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 PRDM12Q9H4Q4 367 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 A0A088AWK7 358 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 FGF10O15520 208 aaPredicted RBP19.7■□□□□ 0.74
SNX27-204ENST00000458013 CATP04040 527 aaKnown RBP19.7■□□□□ 0.74
SNX27-204ENST00000458013 ZNF10P21506 573 aaPredicted RBP19.7■□□□□ 0.74
SNX27-204ENST00000458013 ITPKBP27987 946 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 AXLP30530 894 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 SEC13P55735 322 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 CIR1Q86X95 450 aaPredicted RBP19.7■□□□□ 0.74
SNX27-204ENST00000458013 SNX10Q9Y5X0 201 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 UMODL1Q5DID0 1318 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.69■□□□□ 0.74
SNX27-204ENST00000458013 JOSD2Q8TAC2 188 aa19.69■□□□□ 0.74
SNX27-204ENST00000458013 PRR5-ARHGAP8B1AHC4 643 aa19.69■□□□□ 0.74
SNX27-204ENST00000458013 ATP5F1P24539 256 aaPredicted RBP19.69■□□□□ 0.74
SNX27-204ENST00000458013 ARHGAP8P85298 464 aa19.69■□□□□ 0.74
SNX27-204ENST00000458013 LIPMQ5VYY2 423 aa19.69■□□□□ 0.74
SNX27-204ENST00000458013 ARL10Q8N8L6 244 aa19.69■□□□□ 0.74
SNX27-204ENST00000458013 OR4L1Q8NH43 312 aa19.69■□□□□ 0.74
SNX27-204ENST00000458013 ASB2Q96Q27 587 aa19.69■□□□□ 0.74
SNX27-204ENST00000458013 CDADC1Q9BWV3 514 aa19.69■□□□□ 0.74
SNX27-204ENST00000458013 ALG2Q9H553 416 aa19.69■□□□□ 0.74
SNX27-204ENST00000458013 ERVK-5Q9HDB9 667 aa19.69■□□□□ 0.74
SNX27-204ENST00000458013 ADGRE2Q9UHX3 823 aa19.69■□□□□ 0.74
SNX27-204ENST00000458013 PEX10O60683 326 aa19.69■□□□□ 0.74
SNX27-204ENST00000458013 FSBPO95073 299 aa19.69■□□□□ 0.74
SNX27-204ENST00000458013 UNC5CO95185 931 aa19.69■□□□□ 0.74
SNX27-204ENST00000458013 PPP2R2BQ00005 443 aa19.69■□□□□ 0.74
SNX27-204ENST00000458013 CAPSQ13938 189 aa19.69■□□□□ 0.74
SNX27-204ENST00000458013 APOBEC3HQ6NTF7 200 aaKnown RBP19.69■□□□□ 0.74
SNX27-204ENST00000458013 SLC34A3Q8N130 599 aa19.69■□□□□ 0.74
SNX27-204ENST00000458013 MTMR9Q96QG7 549 aa19.69■□□□□ 0.74
SNX27-204ENST00000458013 TMEM51Q9NW97 253 aa19.69■□□□□ 0.74
SNX27-204ENST00000458013 ERGIC3Q9Y282 383 aa19.69■□□□□ 0.74
SNX27-204ENST00000458013 ZNF780BQ9Y6R6 833 aa19.69■□□□□ 0.74
SNX27-204ENST00000458013 DLC1Q96QB1 1528 aa19.69■□□□□ 0.74
SNX27-204ENST00000458013 IL12AP29459 219 aa19.69■□□□□ 0.74
SNX27-204ENST00000458013 NKAPQ8N5F7 415 aaKnown RBP19.69■□□□□ 0.74
SNX27-204ENST00000458013 HMX1Q9NP08 348 aaPredicted RBP19.69■□□□□ 0.74
SNX27-204ENST00000458013 INTS7Q9NVH2 962 aaKnown RBP19.69■□□□□ 0.74
SNX27-204ENST00000458013 ENOPH1Q9UHY7 261 aa19.69■□□□□ 0.74
SNX27-204ENST00000458013 ASF1AQ9Y294 204 aa19.69■□□□□ 0.74
SNX27-204ENST00000458013 MGRN1O60291 552 aa19.69■□□□□ 0.74
SNX27-204ENST00000458013 RECQL5O94762 991 aaPredicted RBP19.69■□□□□ 0.74
SNX27-204ENST00000458013 SLC25A14O95258 325 aaPredicted RBP19.69■□□□□ 0.74
SNX27-204ENST00000458013 TOP3AQ13472 1001 aaPredicted RBP19.69■□□□□ 0.74
SNX27-204ENST00000458013 RNF43Q68DV7 783 aa19.69■□□□□ 0.74
SNX27-204ENST00000458013 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.69■□□□□ 0.74
SNX27-204ENST00000458013 CERS4Q9HA82 394 aa19.69■□□□□ 0.74
SNX27-204ENST00000458013 ASAH2Q9NR71 780 aa19.69■□□□□ 0.74
SNX27-204ENST00000458013 hCG_1818297A0A087WSY0 165 aa19.68■□□□□ 0.74
SNX27-204ENST00000458013 UQCRBP14927 111 aa19.68■□□□□ 0.74
SNX27-204ENST00000458013 MTHFRP42898 656 aa19.68■□□□□ 0.74
SNX27-204ENST00000458013 HNMTP50135 292 aa19.68■□□□□ 0.74
SNX27-204ENST00000458013 CASP9P55211 416 aa19.68■□□□□ 0.74
SNX27-204ENST00000458013 PSMD5Q16401 504 aa19.68■□□□□ 0.74
SNX27-204ENST00000458013 IQSEC1Q6DN90 963 aa19.68■□□□□ 0.74
SNX27-204ENST00000458013 LINGO4Q6UY18 593 aa19.68■□□□□ 0.74
SNX27-204ENST00000458013 UBE2R2Q712K3 238 aaPredicted RBP19.68■□□□□ 0.74
SNX27-204ENST00000458013 WDR60Q8WVS4 1066 aa19.68■□□□□ 0.74
SNX27-204ENST00000458013 STARD8Q92502 1023 aa19.68■□□□□ 0.74
SNX27-204ENST00000458013 CEP295NLQ96MC4 621 aa19.68■□□□□ 0.74
SNX27-204ENST00000458013 C1QTNF7Q9BXJ2 289 aa19.68■□□□□ 0.74
SNX27-204ENST00000458013 ZNF490Q9ULM2 529 aaPredicted RBP19.68■□□□□ 0.74
SNX27-204ENST00000458013 MAP4K5Q9Y4K4 846 aa19.68■□□□□ 0.74
SNX27-204ENST00000458013 STX12Q86Y82 276 aa19.68■□□□□ 0.74
SNX27-204ENST00000458013 GHDCQ8N2G8 530 aa19.68■□□□□ 0.74
SNX27-204ENST00000458013 TNFSF13BQ9Y275 285 aa19.68■□□□□ 0.74
SNX27-204ENST00000458013 TIMM22Q9Y584 194 aa19.68■□□□□ 0.74
SNX27-204ENST00000458013 MLYCDO95822 493 aa19.68■□□□□ 0.74
SNX27-204ENST00000458013 IL18Q14116 193 aa19.68■□□□□ 0.74
SNX27-204ENST00000458013 CLEC6AQ6EIG7 209 aa19.68■□□□□ 0.74
SNX27-204ENST00000458013 TRIM40Q6P9F5 258 aa19.68■□□□□ 0.74
SNX27-204ENST00000458013 LRMDAQ9H2I8 198 aa19.68■□□□□ 0.74
SNX27-204ENST00000458013 TPK1Q9H3S4 243 aa19.68■□□□□ 0.74
SNX27-204ENST00000458013 ABHD16BQ9H3Z7 469 aa19.68■□□□□ 0.74
SNX27-204ENST00000458013 AXIN1O15169 862 aa19.68■□□□□ 0.74
SNX27-204ENST00000458013 RBMXL2O75526 392 aaKnown RBP19.68■□□□□ 0.74
SNX27-204ENST00000458013 F7P08709 466 aaPredicted RBP19.68■□□□□ 0.74
SNX27-204ENST00000458013 DRD4P21917 467 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms