RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 CD1EP15812 388 aa16.72■□□□□ 0.27
CCDC43-202ENST00000457422 RPS24P62847 133 aaKnown RBP16.72■□□□□ 0.27
CCDC43-202ENST00000457422 SULT2A1Q06520 285 aa16.72■□□□□ 0.27
CCDC43-202ENST00000457422 HECTD3Q5T447 861 aa16.72■□□□□ 0.27
CCDC43-202ENST00000457422 IL31Q6EBC2 164 aa16.72■□□□□ 0.27
CCDC43-202ENST00000457422 PIM3Q86V86 326 aa16.72■□□□□ 0.27
CCDC43-202ENST00000457422 DENND1CQ8IV53 801 aa16.72■□□□□ 0.27
CCDC43-202ENST00000457422 KIRREL3Q8IZU9 778 aa16.72■□□□□ 0.27
CCDC43-202ENST00000457422 CWH43Q9H720 699 aa16.72■□□□□ 0.27
CCDC43-202ENST00000457422 ZBTB26Q9HCK0 441 aa16.72■□□□□ 0.27
CCDC43-202ENST00000457422 MRGBPQ9NV56 204 aa16.72■□□□□ 0.27
CCDC43-202ENST00000457422 UBA2Q9UBT2 640 aaPredicted RBP16.72■□□□□ 0.27
CCDC43-202ENST00000457422 PRPF19Q9UMS4 504 aaKnown RBP16.72■□□□□ 0.27
CCDC43-202ENST00000457422 MTF2Q9Y483 593 aaPredicted RBP16.72■□□□□ 0.27
CCDC43-202ENST00000457422 ILVBLA1L0T0 632 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 CCDC162PA2VCL2 907 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 SDHDO14521 159 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 COCHO43405 550 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 HMGA1P17096 107 aaKnown RBP16.71■□□□□ 0.27
CCDC43-202ENST00000457422 CR2P20023 1033 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 EPHB1P54762 984 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 PRMT2P55345 433 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 CCL23P55773 120 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 OXCT1P55809 520 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 NFKB2Q00653 900 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 BLMHQ13867 455 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 CYLC2Q14093 348 aaPredicted RBP16.71■□□□□ 0.27
CCDC43-202ENST00000457422 C16orf89Q6UX73 402 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 CHST9Q7L1S5 443 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 SNX32Q86XE0 403 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 AFAP1L2Q8N4X5 818 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 OR13C4Q8NGS5 318 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 CEP70Q8NHQ1 597 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 SH3RF2Q8TEC5 729 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 MYCBPQ99417 103 aaPredicted RBP16.71■□□□□ 0.27
CCDC43-202ENST00000457422 TRMOQ9BU70 441 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 SPON2Q9BUD6 331 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 TRPC7Q9HCX4 862 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 S100A14Q9HCY8 104 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 NDE1Q9NXR1 346 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 GTSE1Q9NYZ3 720 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 AFF4Q9UHB7 1163 aaKnown RBP16.71■□□□□ 0.27
CCDC43-202ENST00000457422 POMPQ9Y244 141 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 MAP3K7O43318 606 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 SORBS2O94875 1100 aaKnown RBP16.71■□□□□ 0.27
CCDC43-202ENST00000457422 SEC24AO95486 1093 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 HNRNPLP14866 589 aaKnown RBP eCLIP16.71■□□□□ 0.27
CCDC43-202ENST00000457422 PSMA3P25788 255 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 ABL2P42684 1182 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 ALDH7A1P49419 539 aaKnown RBP16.71■□□□□ 0.27
CCDC43-202ENST00000457422 SGSHP51688 502 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 CCNIQ14094 377 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 TYSND1Q2T9J0 566 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 GPR158Q5T848 1215 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 TMEM198Q66K66 360 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 NXNQ6DKJ4 435 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 ZNF549Q6P9A3 640 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 ISCA2Q86U28 154 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 OR4L1Q8NH43 312 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 L3HYPDHQ96EM0 354 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 MYRFLQ96LU7 910 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 CATSPER2Q96P56 530 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 CINPQ9BW66 212 aaPredicted RBP16.71■□□□□ 0.27
CCDC43-202ENST00000457422 UNC93B1Q9H1C4 597 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 CATSPERZQ9NTU4 200 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 VPS28Q9UK41 221 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 PPM1HQ9ULR3 514 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 LRCH1Q9Y2L9 728 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 CRYL1Q9Y2S2 319 aa16.71■□□□□ 0.27
CCDC43-202ENST00000457422 ARIH1Q9Y4X5 557 aaPredicted RBP16.71■□□□□ 0.27
CCDC43-202ENST00000457422 GBF1Q92538 1859 aa16.7■□□□□ 0.26
CCDC43-202ENST00000457422 STC2O76061 302 aa16.7■□□□□ 0.26
CCDC43-202ENST00000457422 UPP2O95045 317 aa16.7■□□□□ 0.26
CCDC43-202ENST00000457422 SLC4A1P02730 911 aa16.7■□□□□ 0.26
CCDC43-202ENST00000457422 IMPDH1P20839 514 aa16.7■□□□□ 0.26
CCDC43-202ENST00000457422 RGRP47804 291 aa16.7■□□□□ 0.26
CCDC43-202ENST00000457422 STC1P52823 247 aa16.7■□□□□ 0.26
CCDC43-202ENST00000457422 PLK1P53350 603 aa16.7■□□□□ 0.26
CCDC43-202ENST00000457422 TIAL1Q01085 375 aaKnown RBP eCLIP16.7■□□□□ 0.26
CCDC43-202ENST00000457422 SEMA3AQ14563 771 aa16.7■□□□□ 0.26
CCDC43-202ENST00000457422 PPM1LQ5SGD2 360 aa16.7■□□□□ 0.26
CCDC43-202ENST00000457422 TRIM68Q6AZZ1 485 aa16.7■□□□□ 0.26
CCDC43-202ENST00000457422 CUZD1Q86UP6 607 aa16.7■□□□□ 0.26
CCDC43-202ENST00000457422 PELI3Q8N2H9 469 aa16.7■□□□□ 0.26
CCDC43-202ENST00000457422 KYQ8NBH2 561 aa16.7■□□□□ 0.26
CCDC43-202ENST00000457422 FAM136AQ96C01 138 aa16.7■□□□□ 0.26
CCDC43-202ENST00000457422 MARK4Q96L34 752 aa16.7■□□□□ 0.26
CCDC43-202ENST00000457422 NSMCE3Q96MG7 304 aa16.7■□□□□ 0.26
CCDC43-202ENST00000457422 GSTO2Q9H4Y5 243 aa16.7■□□□□ 0.26
CCDC43-202ENST00000457422 CXorf56Q9H5V9 222 aa16.7■□□□□ 0.26
CCDC43-202ENST00000457422 MEAF6Q9HAF1 191 aa16.7■□□□□ 0.26
CCDC43-202ENST00000457422 NLE1Q9NVX2 485 aaPredicted RBP16.7■□□□□ 0.26
CCDC43-202ENST00000457422 COPG1Q9Y678 874 aaKnown RBP16.7■□□□□ 0.26
CCDC43-202ENST00000457422 A0A1B0GVM2 712 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 TCAF2A6NFQ2 919 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 INSIG1O15503 277 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 CRTAMO95727 393 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 MYCP01106 439 aaPredicted RBP16.69■□□□□ 0.26
CCDC43-202ENST00000457422 KLKB1P03952 638 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 HSPA1AP0DMV8 641 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms