RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 MAP3K5Q99683 1374 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 TCRBV5S4A2TA0A5A2 114 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 A4D1N5 150 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 C5orf51A6NDU8 294 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 ZSCAN5BA6NJL1 495 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 SNTNA6NMZ2 147 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 TRIM38O00635 465 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 VILLO15195 856 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 OGTO15294 1046 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 SPAG6O75602 509 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 CBR3O75828 277 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 RNF8O76064 485 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 IFNA14P01570 189 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 HMGCRP04035 888 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 HMGN1P05114 100 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 INHBAP08476 426 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 KRT7P08729 469 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 RALBP11234 206 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 NCF1P14598 390 aaPredicted RBP5.48□□□□□ -1.53
VPS41-209ENST00000457055 PTPN1P18031 435 aaKnown RBP5.48□□□□□ -1.53
VPS41-209ENST00000457055 CR2P20023 1033 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 PSMA2P25787 234 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 SCAND1P57086 179 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 LIPEQ05469 1076 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 LMAN2Q12907 356 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 PAK1Q13153 545 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 XRCC4Q13426 336 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 FHL2Q14192 279 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 RFTN1Q14699 578 aaPredicted RBP5.48□□□□□ -1.53
VPS41-209ENST00000457055 RPS6KA2Q15349 733 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 SEC23AQ15436 765 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 NDUFA5Q16718 116 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 TXNRD1Q16881 649 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 ZMAT1Q5H9K5 638 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 EFHC1Q5JVL4 640 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 SLC9C2Q5TAH2 1124 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 AGBL4Q5VU57 503 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 SULT6B1Q6IMI4 303 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 ETFRF1Q6IPR1 90 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 NPNTQ6UXI9 565 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 DENND5BQ6ZUT9 1274 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 DSG4Q86SJ6 1040 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 TLK2Q86UE8 772 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 SYCP3Q8IZU3 236 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 NLGN4XQ8N0W4 816 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 NXPE1Q8N323 547 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 OR8K1Q8NGG5 319 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 ZNF461Q8TAF7 563 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 UBLCP1Q8WVY7 318 aaPredicted RBP5.48□□□□□ -1.53
VPS41-209ENST00000457055 ATL1Q8WXF7 558 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 MUL1Q969V5 352 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 PHF21BQ96EK2 531 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 HMCESQ96FZ2 354 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 PIWIL1Q96J94 861 aaKnown RBP5.48□□□□□ -1.53
VPS41-209ENST00000457055 FAM71F1Q96KD3 344 aaPredicted RBP5.48□□□□□ -1.53
VPS41-209ENST00000457055 CYTH2Q99418 400 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 DPYSL5Q9BPU6 564 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 PDCD2LQ9BRP1 358 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 APOL6Q9BWW8 343 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 FRMD8P1Q9BZ68 369 aaPredicted RBP5.48□□□□□ -1.53
VPS41-209ENST00000457055 BTBD1Q9H0C5 482 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 IL1RAPL2Q9NP60 686 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 TREM1Q9NP99 234 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 PFDN4Q9NQP4 134 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 SIRT3Q9NTG7 399 aaPredicted RBP5.48□□□□□ -1.53
VPS41-209ENST00000457055 TMEM184CQ9NVA4 438 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 SOHLH2Q9NX45 425 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 MRPL39Q9NYK5 338 aaKnown RBP5.48□□□□□ -1.53
VPS41-209ENST00000457055 TAS2R7Q9NYW3 318 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 CRNNQ9UBG3 495 aaPredicted RBP5.48□□□□□ -1.53
VPS41-209ENST00000457055 ASIC3Q9UHC3 531 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 RPH3AQ9Y2J0 694 aaPredicted RBP5.48□□□□□ -1.53
VPS41-209ENST00000457055 SH3GLB1Q9Y371 365 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 NR2E1Q9Y466 385 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 TRAF6Q9Y4K3 522 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 SPACA6W5XKT8 324 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 ELP1O95163 1332 aa5.48□□□□□ -1.53
VPS41-209ENST00000457055 RGPD3A6NKT7 1758 aaPredicted RBP5.47□□□□□ -1.53
VPS41-209ENST00000457055 RGPD4Q7Z3J3 1758 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 TNRC18O15417 2968 aaPredicted RBP5.47□□□□□ -1.53
VPS41-209ENST00000457055 ADCY9O60503 1353 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 LRPPRCP42704 1394 aaKnown RBP5.47□□□□□ -1.53
VPS41-209ENST00000457055 ANKRD30AQ9BXX3 1397 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.47□□□□□ -1.53
VPS41-209ENST00000457055 ZNF891A8MT65 544 aaPredicted RBP5.47□□□□□ -1.53
VPS41-209ENST00000457055 AGAP14A8MT82 685 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 BTBD19C9JJ37 291 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 E9PI62 339 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 SPECC1L-ADORA2AF8WAN1 911 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 POLRMTO00411 1230 aaKnown RBP5.47□□□□□ -1.53
VPS41-209ENST00000457055 SYT5O00445 386 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 KMOO15229 486 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 CYP27B1O15528 508 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 TRAPPC3O43617 180 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 TLR2O60603 784 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 CDC14BO60729 498 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 PPP6R2O75170 966 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 SMIM24O75264 130 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 CDC123O75794 336 aaPredicted RBP5.47□□□□□ -1.53
VPS41-209ENST00000457055 CIB2O75838 187 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms