RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 DHDDSQ86SQ9 333 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 LDB1Q86U70 411 aaPredicted RBP15.11■□□□□ 0.01
LDLR-202ENST00000455727 PGAM4Q8N0Y7 254 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 FBXO22Q8NEZ5 403 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 BLOC1S5Q8TDH9 187 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 EFCAB1Q9HAE3 211 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 A0A0D9SEW6 157 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 ANKRD36A6QL64 1941 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 TMEM233B4DJY2 109 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 CD1EP15812 388 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 INHBCP55103 352 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 DSG1Q02413 1049 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 GSTA3Q16772 222 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 GPR158Q5T848 1215 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 FAM126BQ8IXS8 530 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 CFAP52Q8N1V2 620 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 PYDC1Q8WXC3 89 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 CCDC124Q96CT7 223 aaKnown RBP15.1■□□□□ 0.01
LDLR-202ENST00000455727 DNAJC1Q96KC8 554 aaKnown RBP15.1■□□□□ 0.01
LDLR-202ENST00000455727 HCSTQ9UBK5 93 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 ARIH1Q9Y4X5 557 aaPredicted RBP15.1■□□□□ 0.01
LDLR-202ENST00000455727 ARL5AQ9Y689 179 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 CCDC162PA2VCL2 907 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 OR51F1A6NGY5 319 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 NT5C1B-RDH14C9J2C7 533 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 H3BNC9 293 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 CCL22O00626 93 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 KDELR3O43731 214 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 KIF1CO43896 1103 aaKnown RBP15.1■□□□□ 0.01
LDLR-202ENST00000455727 GJB3O75712 270 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 EFEMP2O95967 443 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 PSMA3P25788 255 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 TYSND1Q2T9J0 566 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 TCHHL1Q5QJ38 904 aaPredicted RBP15.1■□□□□ 0.01
LDLR-202ENST00000455727 ZNF549Q6P9A3 640 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 SDCCAG8Q86SQ7 713 aaPredicted RBP15.1■□□□□ 0.01
LDLR-202ENST00000455727 CUZD1Q86UP6 607 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 TMEM173Q86WV6 379 aaPredicted RBP15.1■□□□□ 0.01
LDLR-202ENST00000455727 OR4L1Q8NH43 312 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 ECSITQ9BQ95 431 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 VCX3BQ9H321 246 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 GSTO2Q9H4Y5 243 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 CYP4F12Q9HCS2 524 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 CRYL1Q9Y2S2 319 aa15.1■□□□□ 0.01
LDLR-202ENST00000455727 ZFP37Q9Y6Q3 630 aaPredicted RBP15.1■□□□□ 0.01
LDLR-202ENST00000455727 BRCA2P51587 3418 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 CLDN11O75508 207 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 CRTAMO95727 393 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 PDHA1P08559 390 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 CES1P23141 567 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 ERFP50548 548 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 XIAPP98170 497 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 PIGGQ5H8A4 983 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 PRSS55Q6UWB4 352 aaPredicted RBP15.09■□□□□ 0.01
LDLR-202ENST00000455727 BNC2Q6ZN30 1099 aaPredicted RBP15.09■□□□□ 0.01
LDLR-202ENST00000455727 RNF111Q6ZNA4 994 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 APLFQ8IW19 511 aaPredicted RBP15.09■□□□□ 0.01
LDLR-202ENST00000455727 MICAL1Q8TDZ2 1067 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 PLD4Q96BZ4 506 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 RCN3Q96D15 328 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 ASB2Q96Q27 587 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 PPP1R12CQ9BZL4 782 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 ALG9Q9H6U8 611 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 SUDS3Q9H7L9 328 aaPredicted RBP15.09■□□□□ 0.01
LDLR-202ENST00000455727 CATSPERZQ9NTU4 200 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 INTS10Q9NVR2 710 aaKnown RBP15.09■□□□□ 0.01
LDLR-202ENST00000455727 ZDHHC7Q9NXF8 308 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 UTP6Q9NYH9 597 aaKnown RBP15.09■□□□□ 0.01
LDLR-202ENST00000455727 MTRRQ9UBK8 725 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 UBA2Q9UBT2 640 aaPredicted RBP15.09■□□□□ 0.01
LDLR-202ENST00000455727 BCAP29Q9UHQ4 241 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 SUFUQ9UMX1 484 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 G3BP2Q9UN86 482 aaKnown RBP15.09■□□□□ 0.01
LDLR-202ENST00000455727 BACE2Q9Y5Z0 518 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 GBF1Q92538 1859 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 ZNF840PA6NDX5 716 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 TCAF2A6NFQ2 919 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 TBKBP1A7MCY6 615 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 CD1DP15813 335 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 KCNC1P48547 511 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 TIAL1Q01085 375 aaKnown RBP eCLIP15.09■□□□□ 0.01
LDLR-202ENST00000455727 GALNT3Q14435 633 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 ZNF678Q5SXM1 525 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 HECTD3Q5T447 861 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 IL31Q6EBC2 164 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 IZUMO2Q6UXV1 221 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 PNPLA1Q8N8W4 532 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 SLAIN1Q8ND83 568 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 RHEBL1Q8TAI7 183 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 BCL7CQ8WUZ0 217 aaPredicted RBP15.09■□□□□ 0.01
LDLR-202ENST00000455727 PHF21BQ96EK2 531 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 CDKN2AIPNLQ96HQ2 116 aa15.09■□□□□ 0.01
LDLR-202ENST00000455727 NR1H4Q96RI1 486 aaPredicted RBP15.09■□□□□ 0.01
LDLR-202ENST00000455727 NLE1Q9NVX2 485 aaPredicted RBP15.09■□□□□ 0.01
LDLR-202ENST00000455727 ILVBLA1L0T0 632 aa15.08■□□□□ 0
LDLR-202ENST00000455727 SMIM24O75264 130 aa15.08■□□□□ 0
LDLR-202ENST00000455727 CR2P20023 1033 aa15.08■□□□□ 0
LDLR-202ENST00000455727 STC1P52823 247 aa15.08■□□□□ 0
LDLR-202ENST00000455727 HERVK_113P63132 956 aa15.08■□□□□ 0
LDLR-202ENST00000455727 ART3Q13508 389 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms