RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 CRTC1Q6UUV9 634 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 PAQR9Q6ZVX9 377 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 ZNF365Q70YC5 407 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 MON1BQ7L1V2 547 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 RAB11FIP2Q7L804 512 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 OTOP2Q7RTS6 562 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 MILR1Q7Z6M3 343 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 SLFN11Q7Z7L1 901 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 PHLDB2Q86SQ0 1253 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 ALYREFQ86V81 257 aaKnown RBP5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 LCA5Q86VQ0 697 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 ERICH1Q86X53 443 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 METTL23Q86XA0 190 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 KRT73Q86Y46 540 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 RHOT2Q8IXI1 618 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 PQLC1Q8N2U9 271 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 LRRC57Q8N9N7 239 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 B3GALNT2Q8NCR0 500 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 TRIM58Q8NG06 486 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 UBA3Q8TBC4 463 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 HASPINQ8TF76 798 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 SLC35F5Q8WV83 523 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 HOXB13Q92826 284 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 GATA6Q92908 595 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 BADQ92934 168 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 ZNF689Q96CS4 500 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 HNRNPABQ99729 332 aaKnown RBP5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 NCAPGQ9BPX3 1015 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 ACBD6Q9BR61 282 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 TMEM175Q9BSA9 504 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 BRD8Q9H0E9 1235 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 CWH43Q9H720 699 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 FAM49BQ9NUQ9 324 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 DDX43Q9NXZ2 648 aaKnown RBP5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 LPAR3Q9UBY5 353 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 CNOT8Q9UFF9 292 aaKnown RBP5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 CHORDC1Q9UHD1 332 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 GTF3C4Q9UKN8 822 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 TSPAN16Q9UKR8 245 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 CDH9Q9ULB4 789 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 ZMYND8Q9ULU4 1186 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 COG5Q9UP83 839 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 RAXQ9Y2V3 346 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 PRG3Q9Y2Y8 225 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 PTPRDP23468 1912 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 RANBP2P49792 3224 aaKnown RBP5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 TSC2P49815 1807 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 COL4A6Q14031 1691 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 CHD9Q3L8U1 2897 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 TMEM265A0A087WTH1 108 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 TCRBV5S1A1TA0A578 114 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 HMX2A2RU54 273 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 MYBPHLA2RUH7 354 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 FADS2P1A8MWK0 482 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 E7EVH7 732 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 M0QYV0 167 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 MYO1CO00159 1063 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 TULP2O00295 520 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 SYN3O14994 580 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 TSPAN3O60637 253 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 PALMO75781 387 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 MPIG6BO95866 241 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 EFEMP2O95967 443 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 CALB1P05937 261 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 CNPP09543 421 aaKnown RBP5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 CSH1P0DML2 217 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 CSH2P0DML3 217 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 CCDC130P13994 396 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 DDCP20711 480 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 ADORA2BP29275 332 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 PGM1P36871 562 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 NNMTP40261 264 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 GABRB2P47870 512 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 RPL34P49207 117 aaKnown RBP5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 ALDH7A1P49419 539 aaKnown RBP5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 EPHB4P54760 987 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 PSMC1P62191 440 aaKnown RBP5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 ZNF268Q14587 947 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 RPS6KA2Q15349 733 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 CCDC142Q17RM4 750 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 GOLGA7BQ2TAP0 167 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 PTPN20Q4JDL3 420 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 MDH1BQ5I0G3 518 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 FAM171A1Q5VUB5 890 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 PAPD7Q5XG87 772 aaKnown RBP5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 PLEKHA7Q6IQ23 1121 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 PMF1Q6P1K2 205 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 FAM171BQ6P995 826 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 TAS1R1Q7RTX1 841 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 BMP8AQ7Z5Y6 402 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 ANKS1BQ7Z6G8 1248 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 TMCO2Q7Z6W1 182 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 TMEM110Q86TL2 294 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 PRPF39Q86UA1 669 aaKnown RBP5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 TTC30AQ86WT1 665 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 SPACA3Q8IXA5 215 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 FUKQ8N0W3 1084 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 THEM5Q8N1Q8 247 aa5.31□□□□□ -1.56
HMGB1P4-201ENST00000455362 LRRC43Q8N309 656 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms