RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 GRID2IPA4D2P6 1211 aa24.93■■□□□ 1.58
MSH2-203ENST00000454849 MMP2P08253 660 aa24.93■■□□□ 1.58
MSH2-203ENST00000454849 HNF1BP35680 557 aa24.93■■□□□ 1.58
MSH2-203ENST00000454849 EPHB1P54762 984 aa24.93■■□□□ 1.58
MSH2-203ENST00000454849 IFI35P80217 286 aaPredicted RBP24.93■■□□□ 1.58
MSH2-203ENST00000454849 TFDP2Q14188 446 aa24.93■■□□□ 1.58
MSH2-203ENST00000454849 TFDP3Q5H9I0 405 aa24.93■■□□□ 1.58
MSH2-203ENST00000454849 FAXCQ5TGI0 409 aa24.93■■□□□ 1.58
MSH2-203ENST00000454849 KCTD16Q68DU8 428 aa24.93■■□□□ 1.58
MSH2-203ENST00000454849 RD3Q7Z3Z2 195 aa24.93■■□□□ 1.58
MSH2-203ENST00000454849 ZC3H18Q86VM9 953 aaKnown RBP24.93■■□□□ 1.58
MSH2-203ENST00000454849 ZNF548Q8NEK5 533 aaPredicted RBP24.93■■□□□ 1.58
MSH2-203ENST00000454849 KIAA1524Q8TCG1 905 aa24.93■■□□□ 1.58
MSH2-203ENST00000454849 LMX1AQ8TE12 382 aa24.93■■□□□ 1.58
MSH2-203ENST00000454849 TSACCQ96A04 125 aaPredicted RBP24.93■■□□□ 1.58
MSH2-203ENST00000454849 HERPUD2Q9BSE4 406 aa24.93■■□□□ 1.58
MSH2-203ENST00000454849 ACACBO00763 2458 aa24.93■■□□□ 1.58
MSH2-203ENST00000454849 K7ESM1 405 aa24.92■■□□□ 1.58
MSH2-203ENST00000454849 PPP1R12AO14974 1030 aaPredicted RBP24.92■■□□□ 1.58
MSH2-203ENST00000454849 PJA2O43164 708 aa24.92■■□□□ 1.58
MSH2-203ENST00000454849 FZD6O60353 706 aa24.92■■□□□ 1.58
MSH2-203ENST00000454849 HEXIM1O94992 359 aaKnown RBP24.92■■□□□ 1.58
MSH2-203ENST00000454849 PRLP01236 227 aa24.92■■□□□ 1.58
MSH2-203ENST00000454849 NME1P15531 152 aaKnown RBP24.92■■□□□ 1.58
MSH2-203ENST00000454849 ETV3P41162 512 aa24.92■■□□□ 1.58
MSH2-203ENST00000454849 HNRNPKP61978 463 aaKnown RBP eCLIP24.92■■□□□ 1.58
MSH2-203ENST00000454849 PTK2BQ14289 1009 aa24.92■■□□□ 1.58
MSH2-203ENST00000454849 ALG1LQ6GMV1 187 aa24.92■■□□□ 1.58
MSH2-203ENST00000454849 AADACL2Q6P093 401 aa24.92■■□□□ 1.58
MSH2-203ENST00000454849 ENPP7Q6UWV6 458 aa24.92■■□□□ 1.58
MSH2-203ENST00000454849 DHRS13Q6UX07 377 aa24.92■■□□□ 1.58
MSH2-203ENST00000454849 LPCAT1Q8NF37 534 aa24.92■■□□□ 1.58
MSH2-203ENST00000454849 ADAMTS14Q8WXS8 1223 aa24.92■■□□□ 1.58
MSH2-203ENST00000454849 SCRN2Q96FV2 425 aa24.92■■□□□ 1.58
MSH2-203ENST00000454849 COQ10AQ96MF6 247 aa24.92■■□□□ 1.58
MSH2-203ENST00000454849 RBM15Q96T37 977 aaKnown RBP eCLIP24.92■■□□□ 1.583e-8■■■■□ 21.3
MSH2-203ENST00000454849 C10orf88Q9H8K7 445 aa24.92■■□□□ 1.58
MSH2-203ENST00000454849 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.92■■□□□ 1.58
MSH2-203ENST00000454849 A0A1W2PQ67 120 aa24.91■■□□□ 1.58
MSH2-203ENST00000454849 GOLGA6CA6NDK9 693 aa24.91■■□□□ 1.58
MSH2-203ENST00000454849 GOLGA6BA6NDN3 693 aa24.91■■□□□ 1.58
MSH2-203ENST00000454849 F5H423 210 aaPredicted RBP24.91■■□□□ 1.58
MSH2-203ENST00000454849 GOLGA6DP0CG33 693 aa24.91■■□□□ 1.58
MSH2-203ENST00000454849 GIMD1P0DJR0 217 aa24.91■■□□□ 1.58
MSH2-203ENST00000454849 CYP2A6P11509 494 aaPredicted RBP24.91■■□□□ 1.58
MSH2-203ENST00000454849 YPEL5P62699 121 aa24.91■■□□□ 1.58
MSH2-203ENST00000454849 SKOR1P84550 965 aa24.91■■□□□ 1.58
MSH2-203ENST00000454849 CRTC1Q6UUV9 634 aa24.91■■□□□ 1.58
MSH2-203ENST00000454849 Q6ZVL8 140 aa24.91■■□□□ 1.58
MSH2-203ENST00000454849 USP45Q70EL2 814 aa24.91■■□□□ 1.58
MSH2-203ENST00000454849 HID1Q8IV36 788 aa24.91■■□□□ 1.58
MSH2-203ENST00000454849 PHACTR4Q8IZ21 702 aa24.91■■□□□ 1.58
MSH2-203ENST00000454849 EXD1Q8NHP7 514 aa24.91■■□□□ 1.58
MSH2-203ENST00000454849 IFT43Q96FT9 208 aa24.91■■□□□ 1.58
MSH2-203ENST00000454849 TDRD1Q9BXT4 1180 aaKnown RBP24.91■■□□□ 1.58
MSH2-203ENST00000454849 GOLGA6AQ9NYA3 693 aa24.91■■□□□ 1.58
MSH2-203ENST00000454849 AMACRQ9UHK6 382 aa24.91■■□□□ 1.58
MSH2-203ENST00000454849 CD84Q9UIB8 345 aa24.91■■□□□ 1.58
MSH2-203ENST00000454849 CFAP69A5D8W1 941 aa24.9■■□□□ 1.58
MSH2-203ENST00000454849 FAM149AA5PLN7 773 aa24.9■■□□□ 1.58
MSH2-203ENST00000454849 BTNL10A8MVZ5 291 aa24.9■■□□□ 1.58
MSH2-203ENST00000454849 GCATO75600 419 aa24.9■■□□□ 1.58
MSH2-203ENST00000454849 TRIM16O95361 564 aa24.9■■□□□ 1.58
MSH2-203ENST00000454849 CELA2BP08218 269 aaPredicted RBP24.9■■□□□ 1.58
MSH2-203ENST00000454849 CES1P23141 567 aa24.9■■□□□ 1.58
MSH2-203ENST00000454849 CTNNA1P35221 906 aaKnown RBP24.9■■□□□ 1.58
MSH2-203ENST00000454849 ARHGEF7Q14155 803 aa24.9■■□□□ 1.58
MSH2-203ENST00000454849 AGERQ15109 404 aa24.9■■□□□ 1.58
MSH2-203ENST00000454849 DEFB133Q30KQ1 61 aa24.9■■□□□ 1.58
MSH2-203ENST00000454849 PRRT3Q5FWE3 981 aa24.9■■□□□ 1.58
MSH2-203ENST00000454849 MACC1Q6ZN28 852 aa24.9■■□□□ 1.58
MSH2-203ENST00000454849 LRRC57Q8N9N7 239 aa24.9■■□□□ 1.58
MSH2-203ENST00000454849 OR4C6Q8NH72 309 aa24.9■■□□□ 1.58
MSH2-203ENST00000454849 SPOCK2Q92563 424 aa24.9■■□□□ 1.58
MSH2-203ENST00000454849 P3H4Q92791 437 aa24.9■■□□□ 1.58
MSH2-203ENST00000454849 FUBP1Q96AE4 644 aaKnown RBP24.9■■□□□ 1.58
MSH2-203ENST00000454849 NUS1Q96E22 293 aa24.9■■□□□ 1.58
MSH2-203ENST00000454849 RBM41Q96IZ5 413 aaKnown RBP24.9■■□□□ 1.58
MSH2-203ENST00000454849 MCCC1Q96RQ3 725 aaPredicted RBP24.9■■□□□ 1.58
MSH2-203ENST00000454849 LGR4Q9BXB1 951 aa24.9■■□□□ 1.58
MSH2-203ENST00000454849 BRD8Q9H0E9 1235 aa24.9■■□□□ 1.58
MSH2-203ENST00000454849 PCDH9Q9HC56 1237 aa24.9■■□□□ 1.58
MSH2-203ENST00000454849 HAUS2Q9NVX0 235 aa24.9■■□□□ 1.58
MSH2-203ENST00000454849 APOBEC3BQ9UH17 382 aaKnown RBP24.9■■□□□ 1.58
MSH2-203ENST00000454849 PACSIN2Q9UNF0 486 aaPredicted RBP24.9■■□□□ 1.58
MSH2-203ENST00000454849 PCDHA3Q9Y5H8 950 aa24.9■■□□□ 1.58
MSH2-203ENST00000454849 AKAP13Q12802 2813 aa24.9■■□□□ 1.58
MSH2-203ENST00000454849 GOLGA6L6A8MZA4 724 aa24.89■■□□□ 1.58
MSH2-203ENST00000454849 C1QTNF9BB2RNN3 333 aa24.89■■□□□ 1.58
MSH2-203ENST00000454849 H3BM21 787 aa24.89■■□□□ 1.58
MSH2-203ENST00000454849 AQP9O43315 295 aa24.89■■□□□ 1.58
MSH2-203ENST00000454849 C1QTNF9P0C862 333 aa24.89■■□□□ 1.58
MSH2-203ENST00000454849 PPARDQ03181 441 aa24.89■■□□□ 1.58
MSH2-203ENST00000454849 ZNF211Q13398 564 aaPredicted RBP24.89■■□□□ 1.58
MSH2-203ENST00000454849 MTM1Q13496 603 aa24.89■■□□□ 1.58
MSH2-203ENST00000454849 NFATC4Q14934 902 aa24.89■■□□□ 1.58
MSH2-203ENST00000454849 PRKD1Q15139 912 aaPredicted RBP24.89■■□□□ 1.58
MSH2-203ENST00000454849 PCSK7Q16549 785 aa24.89■■□□□ 1.58
MSH2-203ENST00000454849 ALG11Q2TAA5 492 aa24.89■■□□□ 1.58
MSH2-203ENST00000454849 PROX2Q3B8N5 592 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms