RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 B4GAT1O43505 415 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 PCCBP05166 539 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 GPD1P21695 349 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 KELP23276 732 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 PBX1P40424 430 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 AIF1P55008 147 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 NFKB2Q00653 900 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 RALGDSQ12967 914 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 ARHGEF7Q14155 803 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 NR1I3Q14994 352 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 CLPPQ16740 277 aaPredicted RBP11.72□□□□□ -0.53
HERC3-207ENST00000452979 EFHC2Q5JST6 749 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 AFMIDQ63HM1 303 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 WDR59Q6PJI9 974 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 TRIM72Q6ZMU5 477 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 TAF8Q7Z7C8 310 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 ZSWIM9Q86XI8 627 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 PHF13Q86YI8 300 aaPredicted RBP11.72□□□□□ -0.53
HERC3-207ENST00000452979 SFTPA2Q8IWL1 248 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 PYROXD2Q8N2H3 581 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 SLC30A5Q8TAD4 765 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 ECHDC3Q96DC8 303 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 NCAPGQ9BPX3 1015 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 C11orf70Q9BRQ4 267 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 TRIM4Q9C037 500 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 TMEM168Q9H0V1 697 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 SEMA6CQ9H3T2 930 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 LRRC19Q9H756 370 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 CATSPERBQ9H7T0 1116 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 GRPEL1Q9HAV7 217 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 FGF22Q9HCT0 170 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 MRPL40Q9NQ50 206 aaKnown RBP11.72□□□□□ -0.53
HERC3-207ENST00000452979 WDR70Q9NW82 654 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 GEMIN8Q9NWZ8 242 aaKnown RBP11.72□□□□□ -0.53
HERC3-207ENST00000452979 UBA2Q9UBT2 640 aaPredicted RBP11.72□□□□□ -0.53
HERC3-207ENST00000452979 SIK3Q9Y2K2 1263 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 GOLGA6L3A6NEY3 463 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 PES1O00541 588 aaKnown RBP11.71□□□□□ -0.53
HERC3-207ENST00000452979 EPHB6O15197 1021 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 FGF10O15520 208 aaPredicted RBP11.71□□□□□ -0.53
HERC3-207ENST00000452979 PPFIA2O75334 1257 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 RECQL5O94762 991 aaPredicted RBP11.71□□□□□ -0.53
HERC3-207ENST00000452979 GFPT2O94808 682 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 CPNE6O95741 557 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 GM2AP17900 193 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 STAT1P42224 750 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 NDST2P52849 883 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 UBASH3AP57075 661 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 JAM2P57087 298 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 CYP4F2P78329 520 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 UBXN1Q04323 297 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 NSUN2Q08J23 767 aaKnown RBP eCLIP11.71□□□□□ -0.53
HERC3-207ENST00000452979 NR1D2Q14995 579 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 C16orf72Q14CZ0 275 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 SYCP1Q15431 976 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 TSR1Q2NL82 804 aaKnown RBP11.71□□□□□ -0.53
HERC3-207ENST00000452979 COLEC12Q5KU26 742 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 TMEM164Q5U3C3 297 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 SPECC1LQ69YQ0 1117 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 LIPIQ6XZB0 460 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 ZNF574Q6ZN55 896 aaPredicted RBP11.71□□□□□ -0.53
HERC3-207ENST00000452979 ZNF438Q7Z4V0 828 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 SRLQ86TD4 932 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 VASH2Q86V25 355 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 CAMK1DQ8IU85 385 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 C3orf20Q8ND61 904 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 HTR3CQ8WXA8 447 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 ERGIC2Q96RQ1 377 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 PCDHB18PQ96TA0 734 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 SLC12A9Q9BXP2 914 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 SLC25A18Q9H1K4 315 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 GANQ9H2C0 597 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 ADNPQ9H2P0 1102 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 DPEP2Q9H4A9 486 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 ADAM22Q9P0K1 906 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 FZD10Q9ULW2 581 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 PCDHGA3Q9Y5H0 932 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 NAV2Q8IVL1 2488 aa11.71□□□□□ -0.53
HERC3-207ENST00000452979 ARHGEF17Q96PE2 2063 aaPredicted RBP11.71□□□□□ -0.54
HERC3-207ENST00000452979 SDK2Q58EX2 2172 aa11.7□□□□□ -0.54
HERC3-207ENST00000452979 TCRBV5S1A1TA0A578 114 aa11.7□□□□□ -0.54
HERC3-207ENST00000452979 J3KR12 359 aa11.7□□□□□ -0.54
HERC3-207ENST00000452979 PDE2AO00408 941 aaPredicted RBP11.7□□□□□ -0.54
HERC3-207ENST00000452979 HGSO14964 777 aaPredicted RBP11.7□□□□□ -0.54
HERC3-207ENST00000452979 PRAMEF11O60813 436 aa11.7□□□□□ -0.54
HERC3-207ENST00000452979 TPM2P07951 284 aa11.7□□□□□ -0.54
HERC3-207ENST00000452979 HTR7P34969 479 aa11.7□□□□□ -0.54
HERC3-207ENST00000452979 SOX5P35711 763 aa11.7□□□□□ -0.54
HERC3-207ENST00000452979 ARSDP51689 593 aa11.7□□□□□ -0.54
HERC3-207ENST00000452979 ZNF143P52747 638 aaPredicted RBP11.7□□□□□ -0.54
HERC3-207ENST00000452979 MAPK10P53779 464 aa11.7□□□□□ -0.54
HERC3-207ENST00000452979 POLR2LP62875 67 aaKnown RBP11.7□□□□□ -0.54
HERC3-207ENST00000452979 CLCA4Q14CN2 919 aa11.7□□□□□ -0.54
HERC3-207ENST00000452979 FILIP1LQ4L180 1135 aa11.7□□□□□ -0.54
HERC3-207ENST00000452979 FKBP15Q5T1M5 1219 aa11.7□□□□□ -0.54
HERC3-207ENST00000452979 CFAP58Q5T655 872 aa11.7□□□□□ -0.54
HERC3-207ENST00000452979 PHF19Q5T6S3 580 aa11.7□□□□□ -0.54
HERC3-207ENST00000452979 PNCKQ6P2M8 343 aa11.7□□□□□ -0.54
HERC3-207ENST00000452979 PIM3Q86V86 326 aa11.7□□□□□ -0.54
HERC3-207ENST00000452979 CCL4L1Q8NHW4 92 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms