RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 DAAM2Q86T65 1068 aa21.77■■□□□ 1.08
C9orf3-208ENST00000451893 HID1Q8IV36 788 aa21.77■■□□□ 1.08
C9orf3-208ENST00000451893 ATPAF2Q8N5M1 289 aa21.77■■□□□ 1.08
C9orf3-208ENST00000451893 ARFGAP1Q8N6T3 406 aa21.77■■□□□ 1.08
C9orf3-208ENST00000451893 FAM181AQ8N9Y4 354 aa21.77■■□□□ 1.08
C9orf3-208ENST00000451893 TP53I13Q8NBR0 393 aaPredicted RBP21.77■■□□□ 1.08
C9orf3-208ENST00000451893 ZNF564Q8TBZ8 553 aaPredicted RBP21.77■■□□□ 1.08
C9orf3-208ENST00000451893 PDCD6IPQ8WUM4 868 aaKnown RBP21.77■■□□□ 1.08
C9orf3-208ENST00000451893 CAAP1Q9H8G2 361 aa21.77■■□□□ 1.08
C9orf3-208ENST00000451893 MBNL1Q9NR56 388 aaKnown RBP21.77■■□□□ 1.08
C9orf3-208ENST00000451893 AMFRQ9UKV5 643 aa21.77■■□□□ 1.08
C9orf3-208ENST00000451893 SNX12Q9UMY4 172 aa21.77■■□□□ 1.08
C9orf3-208ENST00000451893 HYOU1Q9Y4L1 999 aa21.77■■□□□ 1.08
C9orf3-208ENST00000451893 SHROOM3Q8TF72 1996 aa21.77■■□□□ 1.08
C9orf3-208ENST00000451893 APC2O95996 2303 aa21.77■■□□□ 1.07
C9orf3-208ENST00000451893 CES2O00748 559 aa21.76■■□□□ 1.07
C9orf3-208ENST00000451893 OPA1O60313 960 aa21.76■■□□□ 1.07
C9orf3-208ENST00000451893 ATP1A1P05023 1023 aaKnown RBP21.76■■□□□ 1.07
C9orf3-208ENST00000451893 CSNK1DP48730 415 aa21.76■■□□□ 1.07
C9orf3-208ENST00000451893 HADHQ16836 314 aaKnown RBP21.76■■□□□ 1.07
C9orf3-208ENST00000451893 ARHGAP36Q6ZRI8 547 aa21.76■■□□□ 1.07
C9orf3-208ENST00000451893 EFL1Q7Z2Z2 1120 aaKnown RBP21.76■■□□□ 1.07
C9orf3-208ENST00000451893 PEX26Q7Z412 305 aa21.76■■□□□ 1.07
C9orf3-208ENST00000451893 PKD1L2Q7Z442 2459 aa21.76■■□□□ 1.07
C9orf3-208ENST00000451893 NPWQ8N729 165 aa21.76■■□□□ 1.07
C9orf3-208ENST00000451893 SCUBE2Q9NQ36 999 aa21.76■■□□□ 1.07
C9orf3-208ENST00000451893 CFAP47Q6ZTR5 3102 aa21.76■■□□□ 1.07
C9orf3-208ENST00000451893 ANKRD11Q6UB99 2663 aaPredicted RBP21.75■■□□□ 1.07
C9orf3-208ENST00000451893 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.75■■□□□ 1.07
C9orf3-208ENST00000451893 TSPAN11A1L157 253 aa21.75■■□□□ 1.07
C9orf3-208ENST00000451893 MIF4GDA9UHW6 222 aaKnown RBP21.75■■□□□ 1.07
C9orf3-208ENST00000451893 TPP1O14773 563 aa21.75■■□□□ 1.07
C9orf3-208ENST00000451893 MUSKO15146 869 aa21.75■■□□□ 1.07
C9orf3-208ENST00000451893 BUB1BO60566 1050 aaPredicted RBP21.75■■□□□ 1.07
C9orf3-208ENST00000451893 RASGRP1O95267 797 aa21.75■■□□□ 1.07
C9orf3-208ENST00000451893 ALPIP09923 528 aa21.75■■□□□ 1.07
C9orf3-208ENST00000451893 AMPD1P23109 780 aa21.75■■□□□ 1.07
C9orf3-208ENST00000451893 ACTN2P35609 894 aa21.75■■□□□ 1.07
C9orf3-208ENST00000451893 GJC1P36383 396 aa21.75■■□□□ 1.07
C9orf3-208ENST00000451893 SLC1A1P43005 524 aa21.75■■□□□ 1.07
C9orf3-208ENST00000451893 PEX5P50542 639 aa21.75■■□□□ 1.07
C9orf3-208ENST00000451893 AP1S1P61966 158 aa21.75■■□□□ 1.07
C9orf3-208ENST00000451893 ELOCQ15369 112 aa21.75■■□□□ 1.07
C9orf3-208ENST00000451893 RPS6KA1Q15418 735 aa21.75■■□□□ 1.07
C9orf3-208ENST00000451893 TCEA2Q15560 299 aa21.75■■□□□ 1.07
C9orf3-208ENST00000451893 DPYSL2Q16555 572 aa21.75■■□□□ 1.07
C9orf3-208ENST00000451893 TPRG1LQ5T0D9 272 aa21.75■■□□□ 1.07
C9orf3-208ENST00000451893 ZFYVE27Q5T4F4 411 aa21.75■■□□□ 1.07
C9orf3-208ENST00000451893 ARHGAP12Q8IWW6 846 aa21.75■■□□□ 1.07
C9orf3-208ENST00000451893 CACTIN-AS1Q8N1I8 211 aa21.75■■□□□ 1.07
C9orf3-208ENST00000451893 FSTL5Q8N475 847 aaPredicted RBP21.75■■□□□ 1.07
C9orf3-208ENST00000451893 CEP112Q8N8E3 955 aa21.75■■□□□ 1.07
C9orf3-208ENST00000451893 DCBLD1Q8N8Z6 715 aa21.75■■□□□ 1.07
C9orf3-208ENST00000451893 ZNF599Q96NL3 588 aa21.75■■□□□ 1.07
C9orf3-208ENST00000451893 TLR10Q9BXR5 811 aa21.75■■□□□ 1.07
C9orf3-208ENST00000451893 KLQ9UEF7 1012 aa21.75■■□□□ 1.07
C9orf3-208ENST00000451893 KLF15Q9UIH9 416 aa21.75■■□□□ 1.07
C9orf3-208ENST00000451893 MYO1FO00160 1098 aa21.74■■□□□ 1.07
C9orf3-208ENST00000451893 CACNB4O00305 520 aaPredicted RBP21.74■■□□□ 1.07
C9orf3-208ENST00000451893 SLU7O95391 586 aaKnown RBP21.74■■□□□ 1.07
C9orf3-208ENST00000451893 GIMD1P0DJR0 217 aa21.74■■□□□ 1.07
C9orf3-208ENST00000451893 HSPA9P38646 679 aaKnown RBP21.74■■□□□ 1.07
C9orf3-208ENST00000451893 MMP12P39900 470 aa21.74■■□□□ 1.07
C9orf3-208ENST00000451893 RGRP47804 291 aa21.74■■□□□ 1.07
C9orf3-208ENST00000451893 NSUN2Q08J23 767 aaKnown RBP eCLIP21.74■■□□□ 1.07
C9orf3-208ENST00000451893 DPYSQ14117 519 aa21.74■■□□□ 1.07
C9orf3-208ENST00000451893 INPP5AQ14642 412 aa21.74■■□□□ 1.07
C9orf3-208ENST00000451893 RTP5Q14D33 572 aa21.74■■□□□ 1.07
C9orf3-208ENST00000451893 AFMIDQ63HM1 303 aa21.74■■□□□ 1.07
C9orf3-208ENST00000451893 PDZD3Q86UT5 571 aa21.74■■□□□ 1.07
C9orf3-208ENST00000451893 MYRIPQ8NFW9 859 aa21.74■■□□□ 1.07
C9orf3-208ENST00000451893 APOOQ9BUR5 198 aa21.74■■□□□ 1.07
C9orf3-208ENST00000451893 LRRC61Q9BV99 259 aa21.74■■□□□ 1.07
C9orf3-208ENST00000451893 TCEAL2Q9H3H9 227 aaPredicted RBP21.74■■□□□ 1.07
C9orf3-208ENST00000451893 GULP1Q9UBP9 304 aa21.74■■□□□ 1.07
C9orf3-208ENST00000451893 WDFY3Q8IZQ1 3526 aa21.73■■□□□ 1.07
C9orf3-208ENST00000451893 EIF4E1BA6NMX2 242 aaKnown RBP21.73■■□□□ 1.07
C9orf3-208ENST00000451893 BRINP1O60477 761 aa21.73■■□□□ 1.07
C9orf3-208ENST00000451893 CSO75390 466 aaKnown RBP21.73■■□□□ 1.07
C9orf3-208ENST00000451893 RARAP10276 462 aa21.73■■□□□ 1.07
C9orf3-208ENST00000451893 IL1R2P27930 398 aa21.73■■□□□ 1.07
C9orf3-208ENST00000451893 CDH6P55285 790 aa21.73■■□□□ 1.07
C9orf3-208ENST00000451893 NFATC4Q14934 902 aa21.73■■□□□ 1.07
C9orf3-208ENST00000451893 ACOX1Q15067 660 aa21.73■■□□□ 1.07
C9orf3-208ENST00000451893 WSCD2Q2TBF2 565 aa21.73■■□□□ 1.07
C9orf3-208ENST00000451893 C6orf132Q5T0Z8 1188 aa21.73■■□□□ 1.07
C9orf3-208ENST00000451893 GUSBP11Q6P575 273 aa21.73■■□□□ 1.07
C9orf3-208ENST00000451893 CRTC1Q6UUV9 634 aa21.73■■□□□ 1.07
C9orf3-208ENST00000451893 NT5DC3Q86UY8 548 aa21.73■■□□□ 1.07
C9orf3-208ENST00000451893 GKN2Q86XP6 184 aa21.73■■□□□ 1.07
C9orf3-208ENST00000451893 MNS1Q8NEH6 495 aa21.73■■□□□ 1.07
C9orf3-208ENST00000451893 NAT6Q93015 286 aa21.73■■□□□ 1.07
C9orf3-208ENST00000451893 TSACCQ96A04 125 aaPredicted RBP21.73■■□□□ 1.07
C9orf3-208ENST00000451893 PBKQ96KB5 322 aa21.73■■□□□ 1.07
C9orf3-208ENST00000451893 BTBD6Q96KE9 485 aa21.73■■□□□ 1.07
C9orf3-208ENST00000451893 TBATAQ96M53 351 aa21.73■■□□□ 1.07
C9orf3-208ENST00000451893 HAUS2Q9NVX0 235 aa21.73■■□□□ 1.07
C9orf3-208ENST00000451893 SIRPGQ9P1W8 387 aa21.73■■□□□ 1.07
C9orf3-208ENST00000451893 MOSPD1Q9UJG1 213 aa21.73■■□□□ 1.07
C9orf3-208ENST00000451893 OR1A2Q9Y585 309 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms