RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 FTH1P02794 183 aa5.65□□□□□ -1.5
CDC42BPA-209ENST00000448940 HOXD8P13378 290 aaPredicted RBP5.65□□□□□ -1.5
CDC42BPA-209ENST00000448940 DLG4P78352 724 aa5.65□□□□□ -1.5
CDC42BPA-209ENST00000448940 SLC18A3Q16572 532 aa5.65□□□□□ -1.5
CDC42BPA-209ENST00000448940 Q6ZVU0 165 aa5.65□□□□□ -1.5
CDC42BPA-209ENST00000448940 ADGRD2Q7Z7M1 963 aa5.65□□□□□ -1.5
CDC42BPA-209ENST00000448940 SMC6Q96SB8 1091 aa5.65□□□□□ -1.5
CDC42BPA-209ENST00000448940 OSBPL9Q96SU4 736 aa5.65□□□□□ -1.5
CDC42BPA-209ENST00000448940 COPS8Q99627 209 aa5.65□□□□□ -1.5
CDC42BPA-209ENST00000448940 TLR6Q9Y2C9 796 aa5.65□□□□□ -1.5
CDC42BPA-209ENST00000448940 ARFGEF2Q9Y6D5 1785 aa5.65□□□□□ -1.5
CDC42BPA-209ENST00000448940 PPEF2O14830 753 aa5.65□□□□□ -1.5
CDC42BPA-209ENST00000448940 MAN1A2O60476 641 aa5.65□□□□□ -1.5
CDC42BPA-209ENST00000448940 PNMA6AP0CW24 399 aaPredicted RBP5.65□□□□□ -1.5
CDC42BPA-209ENST00000448940 FLT3P36888 993 aa5.65□□□□□ -1.5
CDC42BPA-209ENST00000448940 DDX39BQ13838 428 aaKnown RBP5.65□□□□□ -1.5
CDC42BPA-209ENST00000448940 SETDB1Q15047 1291 aa5.65□□□□□ -1.5
CDC42BPA-209ENST00000448940 DEFB133Q30KQ1 61 aa5.65□□□□□ -1.5
CDC42BPA-209ENST00000448940 CNSTQ6PJW8 725 aa5.65□□□□□ -1.5
CDC42BPA-209ENST00000448940 CYP20A1Q6UW02 462 aa5.65□□□□□ -1.5
CDC42BPA-209ENST00000448940 ARHGEF19Q8IW93 802 aa5.65□□□□□ -1.5
CDC42BPA-209ENST00000448940 TGM7Q96PF1 710 aa5.65□□□□□ -1.5
CDC42BPA-209ENST00000448940 TTLL2Q9BWV7 592 aa5.65□□□□□ -1.5
CDC42BPA-209ENST00000448940 RHOBTB2Q9BYZ6 727 aa5.65□□□□□ -1.5
CDC42BPA-209ENST00000448940 SSC5DA1L4H1 1573 aa5.65□□□□□ -1.5
CDC42BPA-209ENST00000448940 SSU72P8A0A1W2PR75 194 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 H3BMM5 538 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 GLP2RO95838 553 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 TMEM253P0C7T8 217 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 ARSAP15289 507 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 LRRC74AQ0VAA2 488 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 STX4Q12846 297 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 GPS1Q13098 491 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 CLEC16AQ2KHT3 1053 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 HP1BP3Q5SSJ5 553 aaPredicted RBP5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 UBXN11Q5T124 520 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 CACHD1Q5VU97 1274 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 CLEC20AQ6ZU45 233 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 ERMP1Q7Z2K6 904 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 FSTL5Q8N475 847 aaPredicted RBP5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 HMCESQ96FZ2 354 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 FAM84AQ96KN4 292 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 NR1H4Q96RI1 486 aaPredicted RBP5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 MYADMQ96S97 322 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 ZBTB18Q99592 522 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 KCNN2Q9H2S1 579 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 DTNAQ9Y4J8 743 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 KRT87PA6NCN2 255 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 POC1B-GALNT4F8VUJ3 575 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 F8VZ95 297 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 MFAP3LO75121 409 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 SMIM24O75264 130 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 IL33O95760 270 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 ME2P23368 584 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 NDUFS1P28331 727 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 ZNF132P52740 706 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 TNK2Q07912 1038 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 CST6Q15828 149 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 IQCCQ4KMZ1 466 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 BRAT1Q6PJG6 821 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 STRADAQ7RTN6 431 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 ELMO1Q92556 727 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 FER1L6-AS2Q96M78 137 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 SLC25A23Q9BV35 468 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 ULBP3Q9BZM4 244 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 WWOXQ9NZC7 414 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 TMEM63CQ9P1W3 806 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 RPS6KB2Q9UBS0 482 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 OR10H1Q9Y4A9 318 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 TNS1Q9HBL0 1735 aaKnown RBP5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 A0A1B0GVT2 93 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 A0A1W2PQU0 124 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 E9PAM4 449 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 KCNK1O00180 336 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 CTPS1P17812 591 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 RABIFP47224 123 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 EIF3BP55884 814 aaKnown RBP5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 STX1BP61266 288 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 SOX4Q06945 474 aaPredicted RBP5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 ECM1Q16610 540 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 FSCBQ5H9T9 825 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 PITRM1Q5JRX3 1037 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 ERN2Q76MJ5 926 aaKnown RBP5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 SLC26A9Q7LBE3 791 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 PDCD7Q8N8D1 485 aaKnown RBP5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 OR6C4Q8NGE1 309 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 SLC26A7Q8TE54 656 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 OTULINQ96BN8 352 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 RNF121Q9H920 327 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 NSMCE4AQ9NXX6 385 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 PSD3Q9NYI0 1048 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 WRAP73Q9P2S5 460 aaPredicted RBP5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 RNF14Q9UBS8 474 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 BAZ2AQ9UIF9 1905 aaKnown RBP5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 ESPL1Q14674 2120 aa5.65□□□□□ -1.51
CDC42BPA-209ENST00000448940 CEP250Q9BV73 2442 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 ILVBLA1L0T0 632 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 YJEFN3A6XGL0 299 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 E7ENQ6 273 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms