RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 RAD51BO15315 384 aa14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 ANXA9O76027 345 aa14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 HEXIM1O94992 359 aaKnown RBP14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 TRBC1P01850 177 aa14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 WNT1P04628 370 aa14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 ALPIP09923 528 aa14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 THEGLP0DJG4 465 aa14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 ACTN2P35609 894 aa14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 HNF1BP35680 557 aa14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 LIMK1P53667 647 aa14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 GEMP55040 296 aa14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 RALGDSQ12967 914 aa14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 IHHQ14623 411 aa14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 HLA-BQ31612 363 aa14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 ANKRD20A2Q5SQ80 823 aa14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 ANKRD20A1Q5TYW2 823 aa14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 ANKRD20A3Q5VUR7 823 aa14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 KYAT3Q6YP21 454 aaKnown RBP14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 GCNT7Q6ZNI0 430 aa14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 ARHGEF18Q6ZSZ5 1173 aa14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 DCP2Q8IU60 420 aaKnown RBP14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 FAM71DQ8N9W8 422 aa14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 SLC35B2Q8TB61 432 aa14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 C1orf54Q8WWF1 131 aa14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 ATG4AQ8WYN0 398 aa14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 SPATA13Q96N96 652 aa14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 MCCC1Q96RQ3 725 aaPredicted RBP14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 TMEM121Q9BTD3 319 aa14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 GBA3Q9H227 469 aa14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 USP29Q9HBJ7 922 aa14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 KCTD5Q9NXV2 234 aa14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 ZNF148Q9UQR1 794 aa14.06□□□□□ -0.16
GTF3C3-206ENST00000448539 C5orf60A6NFR6 353 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 GOLGA8CPA6NN73 597 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 ANKRD66B4E2M5 251 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 H0Y8X5 98 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 PSMD11O00231 422 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 CDX4O14627 284 aaPredicted RBP14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 LIASO43766 372 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 DFNA5O60443 496 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 RECQL5O94762 991 aaPredicted RBP14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 NDST3O95803 873 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 PRLP01236 227 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 ATP1A1P05023 1023 aaKnown RBP14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 ZNF30P17039 623 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 STIP1P31948 543 aaKnown RBP14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 CTSKP43235 329 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 RABIFP47224 123 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 WNT3AP56704 352 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 NXPH1P58417 271 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 GNG11P61952 73 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 BNC1Q01954 994 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 MPP3Q13368 585 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 SNX1Q13596 522 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 GALNT3Q14435 633 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 CNGA3Q16281 694 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 QPCTQ16769 361 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 Q6ZSR6 202 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 ABI3BPQ7Z7G0 1075 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 OXR1Q8N573 874 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 CCDC110Q8TBZ0 833 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 CCHCR1Q8TD31 782 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 TADA1Q96BN2 335 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 CENPTQ96BT3 561 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 BMFQ96LC9 184 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 SRPK1Q96SB4 655 aaKnown RBP14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 NAP1L3Q99457 506 aaPredicted RBP14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 KLF6Q99612 283 aaPredicted RBP14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 FSD1LQ9BXM9 530 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 HOMER3Q9NSC5 361 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 ZKSCAN5Q9Y2L8 839 aa14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 AAR2Q9Y312 384 aaKnown RBP14.05□□□□□ -0.16
GTF3C3-206ENST00000448539 CEP250Q9BV73 2442 aa14.04□□□□□ -0.16
GTF3C3-206ENST00000448539 ANKRD36A6QL64 1941 aa14.04□□□□□ -0.16
GTF3C3-206ENST00000448539 TRPM6Q9BX84 2022 aa14.04□□□□□ -0.16
GTF3C3-206ENST00000448539 GOLGA6CA6NDK9 693 aa14.04□□□□□ -0.16
GTF3C3-206ENST00000448539 GOLGA6BA6NDN3 693 aa14.04□□□□□ -0.16
GTF3C3-206ENST00000448539 POM121BA6NF01 834 aa14.04□□□□□ -0.16
GTF3C3-206ENST00000448539 TOR1BO14657 336 aa14.04□□□□□ -0.16
GTF3C3-206ENST00000448539 PCCBP05166 539 aa14.04□□□□□ -0.16
GTF3C3-206ENST00000448539 GOLGA6DP0CG33 693 aa14.04□□□□□ -0.16
GTF3C3-206ENST00000448539 LHCGRP22888 699 aa14.04□□□□□ -0.16
GTF3C3-206ENST00000448539 PSMB4P28070 264 aa14.04□□□□□ -0.16
GTF3C3-206ENST00000448539 IGFALSP35858 605 aa14.04□□□□□ -0.16
GTF3C3-206ENST00000448539 ARRB1P49407 418 aaPredicted RBP14.04□□□□□ -0.16
GTF3C3-206ENST00000448539 THOP1P52888 689 aa14.04□□□□□ -0.16
GTF3C3-206ENST00000448539 AGERQ15109 404 aa14.04□□□□□ -0.16
GTF3C3-206ENST00000448539 IRF4Q15306 451 aa14.04□□□□□ -0.16
GTF3C3-206ENST00000448539 CCNG2Q16589 344 aa14.04□□□□□ -0.16
GTF3C3-206ENST00000448539 WSCD2Q2TBF2 565 aa14.04□□□□□ -0.16
GTF3C3-206ENST00000448539 LRRC66Q68CR7 880 aa14.04□□□□□ -0.16
GTF3C3-206ENST00000448539 CRTC1Q6UUV9 634 aa14.04□□□□□ -0.16
GTF3C3-206ENST00000448539 TSPAN33Q86UF1 283 aa14.04□□□□□ -0.16
GTF3C3-206ENST00000448539 TP53I13Q8NBR0 393 aaPredicted RBP14.04□□□□□ -0.16
GTF3C3-206ENST00000448539 IPMKQ8NFU5 416 aa14.04□□□□□ -0.16
GTF3C3-206ENST00000448539 OR13H1Q8NG92 308 aa14.04□□□□□ -0.16
GTF3C3-206ENST00000448539 OR2I1PQ8NGU4 316 aa14.04□□□□□ -0.16
GTF3C3-206ENST00000448539 NUS1Q96E22 293 aa14.04□□□□□ -0.16
GTF3C3-206ENST00000448539 DNAAF2Q9NVR5 837 aaKnown RBP14.04□□□□□ -0.16
GTF3C3-206ENST00000448539 GOLGA6AQ9NYA3 693 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms