RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 BBOX1O75936 387 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 DCDC1P59894 354 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 NFE2L1Q14494 772 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 RAB35Q15286 201 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 SMTNL2Q2TAL5 461 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 FCRL4Q96PJ5 515 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 IRF2BPLQ9H1B7 796 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 BIN3Q9NQY0 253 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 TRHDEQ9UKU6 1024 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 FKBP7Q9Y680 259 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 DISC1C4P0D8 188 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 TRDMT1O14717 391 aaKnown RBP8.96□□□□□ -0.98
NIPBL-202ENST00000448238 FBXO21O94952 628 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 VNN2O95498 520 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 COMTP21964 271 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 S100A7P31151 101 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 ZNF135P52742 658 aaPredicted RBP8.96□□□□□ -0.98
NIPBL-202ENST00000448238 NKX6-1P78426 367 aaPredicted RBP8.96□□□□□ -0.98
NIPBL-202ENST00000448238 ARFRP1Q13795 201 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 GNMTQ14749 295 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 QRICH1Q2TAL8 776 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 MOB2Q70IA6 237 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 FBXO36Q8NEA4 188 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 SSH3Q8TE77 659 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 SELENOMQ8WWX9 145 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 TSNAXQ99598 290 aaKnown RBP8.96□□□□□ -0.98
NIPBL-202ENST00000448238 MYNNQ9NPC7 610 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 TMEM260Q9NX78 707 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 NR2E1Q9Y466 385 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 ZNF185O15231 689 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 PEX14O75381 377 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 IFI30P13284 250 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 CTSEP14091 401 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 RORCP51449 518 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 THOP1P52888 689 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 SSX2Q16385 188 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 ITIH5Q86UX2 942 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 SLC39A3Q9BRY0 314 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 CA5BQ9Y2D0 317 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 PLEKHM1Q9Y4G2 1056 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 ALG6Q9Y672 507 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 AQRO60306 1485 aaKnown RBP eCLIP8.95□□□□□ -0.988e-7■■■□□ 19
NIPBL-202ENST00000448238 ZMYM4Q5VZL5 1548 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 CCDC163A0A0D9SF12 145 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 TFPIP10646 304 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 UCHL3P15374 230 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 ADH6P28332 368 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 SLC16A2P36021 539 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 CDH17Q12864 832 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 SNRNP35Q16560 246 aaKnown RBP8.95□□□□□ -0.98
NIPBL-202ENST00000448238 MTFR2Q6P444 385 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 RNF149Q8NC42 400 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 NKX2-3Q8TAU0 364 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 ZNF398Q8TD17 642 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 SYT15Q9BQS2 421 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 GULP1Q9UBP9 304 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 WIZO95785 1651 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 TMEM253P0C7T8 217 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 IDO1P14902 403 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 CASRP41180 1078 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 ELOAQ14241 798 aaKnown RBP8.95□□□□□ -0.98
NIPBL-202ENST00000448238 CXorf57Q6NSI4 855 aaKnown RBP8.95□□□□□ -0.98
NIPBL-202ENST00000448238 SWSAP1Q6NVH7 229 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 SPESP1Q6UW49 350 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 CYP4X1Q8N118 509 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 PCSK9Q8NBP7 692 aaKnown RBP8.95□□□□□ -0.98
NIPBL-202ENST00000448238 POF1BQ8WVV4 589 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 PYDC1Q8WXC3 89 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 SMARCD1Q96GM5 515 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 VPS28Q9UK41 221 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 PRPF19Q9UMS4 504 aaKnown RBP8.95□□□□□ -0.98
NIPBL-202ENST00000448238 AP1M2Q9Y6Q5 423 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 CABYRO75952 493 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 MT-CO2P00403 227 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 HCKP08631 526 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 VEGFCP49767 419 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 E2F1Q01094 437 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 LYPLAL1Q5VWZ2 237 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 MMP19Q99542 508 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 CHIAQ9BZP6 476 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 IGSF9BQ9UPX0 1349 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 FABP12A6NFH5 140 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 FADS2P1A8MWK0 482 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 GSC2O15499 205 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 CYP27B1O15528 508 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 PDHBP11177 359 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 GLDCP23378 1020 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 GYG1P46976 350 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 PKNOX1P55347 436 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 BDH1Q02338 343 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 FGL1Q08830 312 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 BLMHQ13867 455 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 CBWD6Q4V339 395 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 ZNF782Q6ZMW2 699 aaPredicted RBP8.95□□□□□ -0.98
NIPBL-202ENST00000448238 GCNT7Q6ZNI0 430 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 OR56B2PQ8NGI1 322 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 PPP1R13LQ8WUF5 828 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 HPDLQ96IR7 371 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 TCF12Q99081 682 aa8.95□□□□□ -0.98
NIPBL-202ENST00000448238 NDNQ99608 321 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms