RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 IGHV1OR15-9A0A0B4J2B8 117 aa18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 C1orf232A0A0U1RR37 186 aa18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 CCDC78A2IDD5 438 aa18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 PRR33A8MZF0 331 aa18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 NDC80O14777 642 aa18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 SLC7A4O43246 635 aa18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 BUD23O43709 281 aaKnown RBP18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 AP1G1O43747 822 aa18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 PCDH8O95206 1070 aa18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 CLDN7O95471 211 aa18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 IGLV3-19P01714 112 aa18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 SUOXP51687 545 aa18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 CCDC15Q0P6D6 951 aa18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 ELP6Q0PNE2 266 aa18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 HLTFQ14527 1009 aaKnown RBP eCLIP18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 CNGA3Q16281 694 aa18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 CDKN3Q16667 212 aa18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 TMEM52BQ4KMG9 183 aa18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 MSS51Q4VC12 460 aa18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 CCDC38Q502W7 563 aa18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 IFT20Q8IY31 132 aa18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 AGGF1Q8N302 714 aaeCLIP18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 TTC30BQ8N4P2 665 aa18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 TOE1Q96GM8 510 aaKnown RBP18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 GPR63Q9BZJ6 419 aa18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 BTBD1Q9H0C5 482 aa18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 MAGEE1Q9HCI5 957 aa18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 SYBUQ9NX95 663 aa18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 KCTD3Q9Y597 815 aa18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 ZNF106Q9H2Y7 1883 aaKnown RBP18.03■□□□□ 0.48
TRAPPC4-203ENST00000447216 SMAPO00193 183 aa18.02■□□□□ 0.48
TRAPPC4-203ENST00000447216 MMP20O60882 483 aa18.02■□□□□ 0.48
TRAPPC4-203ENST00000447216 ZNF217O75362 1048 aa18.02■□□□□ 0.48
TRAPPC4-203ENST00000447216 MLNP12872 115 aa18.02■□□□□ 0.48
TRAPPC4-203ENST00000447216 NFKBIAP25963 317 aa18.02■□□□□ 0.48
TRAPPC4-203ENST00000447216 HOXA6P31267 233 aa18.02■□□□□ 0.48
TRAPPC4-203ENST00000447216 MAGEA3P43357 314 aa18.02■□□□□ 0.48
TRAPPC4-203ENST00000447216 NPY2RP49146 381 aa18.02■□□□□ 0.48
TRAPPC4-203ENST00000447216 ARL4CP56559 192 aa18.02■□□□□ 0.48
TRAPPC4-203ENST00000447216 CAV1Q03135 178 aa18.02■□□□□ 0.48
TRAPPC4-203ENST00000447216 BBS9Q3SYG4 887 aa18.02■□□□□ 0.48
TRAPPC4-203ENST00000447216 HP1BP3Q5SSJ5 553 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC4-203ENST00000447216 LRRC66Q68CR7 880 aa18.02■□□□□ 0.48
TRAPPC4-203ENST00000447216 GLT6D1Q7Z4J2 308 aa18.02■□□□□ 0.48
TRAPPC4-203ENST00000447216 WDR5BQ86VZ2 330 aa18.02■□□□□ 0.48
TRAPPC4-203ENST00000447216 GSPT2Q8IYD1 628 aaKnown RBP18.02■□□□□ 0.48
TRAPPC4-203ENST00000447216 ZCCHC9Q8N567 271 aaKnown RBP18.02■□□□□ 0.48
TRAPPC4-203ENST00000447216 LYSMD1Q96S90 227 aa18.02■□□□□ 0.48
TRAPPC4-203ENST00000447216 WSB2Q9NYS7 404 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC4-203ENST00000447216 BFARQ9NZS9 450 aa18.02■□□□□ 0.48
TRAPPC4-203ENST00000447216 MBD1Q9UIS9 605 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC4-203ENST00000447216 NFU1Q9UMS0 254 aa18.02■□□□□ 0.48
TRAPPC4-203ENST00000447216 COQ6Q9Y2Z9 468 aa18.02■□□□□ 0.48
TRAPPC4-203ENST00000447216 ARL5AQ9Y689 179 aa18.02■□□□□ 0.48
TRAPPC4-203ENST00000447216 TBC1D3DA0A087WVF3 549 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 TBC1D3IA0A087WXS9 549 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 TBC1D3EA0A087X179 549 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 TBC1D3KA0A087X1G2 549 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 TBC1D3FA6NER0 549 aaPredicted RBP18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 TBC1D3LB9A6J9 549 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 RNGTTO60942 597 aaKnown RBP18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 SEMA4FO95754 770 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 C1SP09871 688 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 ELFN1P0C7U0 828 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 TBC1D3HP0C7X1 549 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 ECHS1P30084 290 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 CD6P30203 668 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 OXTRP30559 389 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 LIG3P49916 1009 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 PPP2CBP62714 309 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 PPP2CAP67775 309 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 TUBB4BP68371 445 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 DHX9Q08211 1270 aaKnown RBP18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 ARHGEF7Q14155 803 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 PTPRCAPQ14761 206 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 HIF1AQ16665 826 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 SEL1L3Q68CR1 1132 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 TBC1D3GQ6DHY5 549 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 TBC1D3CQ6IPX1 549 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 LIPIQ6XZB0 460 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 RFLNAQ6ZTI6 216 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 MICALCLQ6ZW33 695 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 HSD11B1LQ7Z5J1 315 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 CCDC25Q86WR0 208 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 TBC1D3Q8IZP1 549 aaPredicted RBP18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 CXorf40AQ8TE69 158 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 KLK6Q92876 244 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 EID2BQ96D98 161 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 GPR174Q9BXC1 333 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 SGK2Q9HBY8 427 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 HACD3Q9P035 362 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 FBXO4Q9UKT5 387 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 ZFR2Q9UPR6 939 aaKnown RBP18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 FANCMQ8IYD8 2048 aa18.01■□□□□ 0.47
TRAPPC4-203ENST00000447216 A0A1W2PQU0 124 aa18■□□□□ 0.47
TRAPPC4-203ENST00000447216 IGLON5A6NGN9 336 aa18■□□□□ 0.47
TRAPPC4-203ENST00000447216 TSPAN6O43657 245 aa18■□□□□ 0.47
TRAPPC4-203ENST00000447216 PPFIA2O75334 1257 aa18■□□□□ 0.47
TRAPPC4-203ENST00000447216 BCKDHBP21953 392 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms