RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 FPGSQ05932 587 aa9.55□□□□□ -0.88
COL6A4P1-201ENST00000446690 UBAP2LQ14157 1087 aaKnown RBP9.55□□□□□ -0.88
COL6A4P1-201ENST00000446690 TSNAXIP1Q2TAA8 658 aa9.55□□□□□ -0.88
COL6A4P1-201ENST00000446690 PPM1LQ5SGD2 360 aa9.55□□□□□ -0.88
COL6A4P1-201ENST00000446690 WLSQ5T9L3 541 aa9.55□□□□□ -0.88
COL6A4P1-201ENST00000446690 AGAP9Q5VTM2 703 aa9.55□□□□□ -0.88
COL6A4P1-201ENST00000446690 ARMC3Q5W041 872 aa9.55□□□□□ -0.88
COL6A4P1-201ENST00000446690 KLC3Q6P597 504 aa9.55□□□□□ -0.88
COL6A4P1-201ENST00000446690 LILRA6Q6PI73 481 aa9.55□□□□□ -0.88
COL6A4P1-201ENST00000446690 ZNF783Q6ZMS7 281 aa9.55□□□□□ -0.88
COL6A4P1-201ENST00000446690 Q6ZNB5 142 aa9.55□□□□□ -0.88
COL6A4P1-201ENST00000446690 MAVSQ7Z434 540 aa9.55□□□□□ -0.88
COL6A4P1-201ENST00000446690 TMC8Q8IU68 726 aa9.55□□□□□ -0.88
COL6A4P1-201ENST00000446690 RYBPQ8N488 228 aaPredicted RBP9.55□□□□□ -0.88
COL6A4P1-201ENST00000446690 RDH11Q8TC12 318 aa9.55□□□□□ -0.88
COL6A4P1-201ENST00000446690 SH3RF2Q8TEC5 729 aa9.55□□□□□ -0.88
COL6A4P1-201ENST00000446690 SCG3Q8WXD2 468 aaKnown RBP9.55□□□□□ -0.88
COL6A4P1-201ENST00000446690 MIEF2Q96C03 454 aa9.55□□□□□ -0.88
COL6A4P1-201ENST00000446690 TSPAN17Q96FV3 270 aa9.55□□□□□ -0.88
COL6A4P1-201ENST00000446690 TBC1D10AQ9BXI6 508 aa9.55□□□□□ -0.88
COL6A4P1-201ENST00000446690 EMILIN2Q9BXX0 1053 aa9.55□□□□□ -0.88
COL6A4P1-201ENST00000446690 SLC46A2Q9BY10 475 aa9.55□□□□□ -0.88
COL6A4P1-201ENST00000446690 ILKAPQ9H0C8 392 aaPredicted RBP9.55□□□□□ -0.88
COL6A4P1-201ENST00000446690 MRPL46Q9H2W6 279 aaKnown RBP9.55□□□□□ -0.88
COL6A4P1-201ENST00000446690 MAN1C1Q9NR34 630 aa9.55□□□□□ -0.88
COL6A4P1-201ENST00000446690 ASAH2Q9NR71 780 aa9.55□□□□□ -0.88
COL6A4P1-201ENST00000446690 IGSF5Q9NSI5 407 aa9.55□□□□□ -0.88
COL6A4P1-201ENST00000446690 CLEC4EQ9ULY5 219 aa9.55□□□□□ -0.88
COL6A4P1-201ENST00000446690 PCDHB9Q9Y5E1 797 aa9.55□□□□□ -0.88
COL6A4P1-201ENST00000446690 NEMP2A6NFY4 417 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 TMEM114B3SHH9 223 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 LEFTY2O00292 366 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 GYG2O15488 501 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 H2AFYO75367 372 aaKnown RBP9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 ZMPSTE24O75844 475 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 ATP6V1G2O95670 118 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 GLUD1P00367 558 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 LTA4HP09960 611 aaKnown RBP9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 LINC00271P0C7V0 271 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 NCF2P19878 526 aaPredicted RBP9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 CALB2P22676 271 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 CES1P23141 567 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 PTPN4P29074 926 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 KPNA2P52292 529 aaKnown RBP9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 HTRA4P83105 476 aaPredicted RBP9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 KDSRQ06136 332 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 TRAF2Q12933 501 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 PPIGQ13427 754 aaKnown RBP eCLIP9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 TAF1AQ15573 450 aaPredicted RBP9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 ARL13AQ5H913 290 aaPredicted RBP9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 SPDYAQ5MJ70 313 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 GPR158Q5T848 1215 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 RINLQ6ZS11 566 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 LCA5Q86VQ0 697 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 OR6Y1Q8NGX8 325 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 ANKRD49Q8WVL7 239 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 INPP5DQ92835 1189 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 UTP4Q969X6 686 aaKnown RBP9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 PTCD3Q96EY7 689 aaKnown RBP9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 MRPL57Q9BQC6 102 aaKnown RBP9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 SIKE1Q9BRV8 207 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 LRRC3Q9BY71 257 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 CDH19Q9H159 772 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 FAM96AQ9H5X1 160 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 COG4Q9H9E3 785 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 CYP4F12Q9HCS2 524 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 STK39Q9UEW8 545 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 MTF2Q9Y483 593 aaPredicted RBP9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 PRR5-ARHGAP8B1AHC4 643 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 SMAD6O43541 496 aaKnown RBP9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 BNIP3LO60238 219 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 RFPL2O75678 378 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 PIGNO95427 931 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 CTPS1P17812 591 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 MPSTP25325 297 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 CDC25CP30307 473 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 FMO4P31512 558 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 CDKN1CP49918 316 aaPredicted RBP9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 PLK1P53350 603 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 ARHGAP8P85298 464 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 ACVR1Q04771 509 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 KRT72Q14CN4 511 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 NCEH1Q6PIU2 408 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 HTR3DQ70Z44 454 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 TREML1Q86YW5 311 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 LMNTD2Q8IXW0 634 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 N4BP2L2Q92802 583 aaPredicted RBP9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 CLP1Q92989 425 aaKnown RBP9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 PHF21BQ96EK2 531 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 DRC3Q9H069 523 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 POMKQ9H5K3 350 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 NLE1Q9NVX2 485 aaPredicted RBP9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 LHX3Q9UBR4 397 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 LNPEPQ9UIQ6 1025 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 CCL26Q9Y258 94 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 OR51B4Q9Y5P0 310 aa9.54□□□□□ -0.88
COL6A4P1-201ENST00000446690 MYLKQ15746 1914 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 GOLGA8QA0A0J9YX86 632 aa9.53□□□□□ -0.88
COL6A4P1-201ENST00000446690 GOLGA8OA6NCC3 632 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms