RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 STC1P52823 247 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 ERVFC1P60507 584 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 RPL26P61254 145 aaKnown RBP15.72■□□□□ 0.11
SNX13-204ENST00000444712 ACAP2Q15057 778 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 PLPP4Q5VZY2 271 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 LINGO4Q6UY18 593 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 BBS7Q8IWZ6 715 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 TMEM151AQ8N4L1 468 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 OR13C4Q8NGS5 318 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 NSL1Q96IY1 281 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 GPR78Q96P69 363 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 DRC3Q9H069 523 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 ILKAPQ9H0C8 392 aaPredicted RBP15.72■□□□□ 0.11
SNX13-204ENST00000444712 HAO1Q9UJM8 370 aa15.72■□□□□ 0.11
SNX13-204ENST00000444712 RPL26L1Q9UNX3 145 aaKnown RBP15.72■□□□□ 0.11
SNX13-204ENST00000444712 SLCO1B7G3V0H7 640 aa15.71■□□□□ 0.11
SNX13-204ENST00000444712 AURKAO14965 403 aa15.71■□□□□ 0.11
SNX13-204ENST00000444712 CCL16O15467 120 aa15.71■□□□□ 0.11
SNX13-204ENST00000444712 PTPN4P29074 926 aa15.71■□□□□ 0.11
SNX13-204ENST00000444712 GLRBP48167 497 aa15.71■□□□□ 0.11
SNX13-204ENST00000444712 PLK1P53350 603 aa15.71■□□□□ 0.11
SNX13-204ENST00000444712 RCN2Q14257 317 aa15.71■□□□□ 0.11
SNX13-204ENST00000444712 CFAP157Q5JU67 520 aa15.71■□□□□ 0.11
SNX13-204ENST00000444712 UBE2Q1Q7Z7E8 422 aa15.71■□□□□ 0.11
SNX13-204ENST00000444712 NDNQ99608 321 aa15.71■□□□□ 0.11
SNX13-204ENST00000444712 OLFM1Q99784 485 aa15.71■□□□□ 0.11
SNX13-204ENST00000444712 C19orf43Q9BQ61 176 aa15.71■□□□□ 0.11
SNX13-204ENST00000444712 GATA5Q9BWX5 397 aaPredicted RBP15.71■□□□□ 0.11
SNX13-204ENST00000444712 CXXC1Q9P0U4 656 aaPredicted RBP15.71■□□□□ 0.11
SNX13-204ENST00000444712 MARCH4Q9P2E8 410 aaPredicted RBP15.71■□□□□ 0.11
SNX13-204ENST00000444712 RAP2CQ9Y3L5 183 aa15.71■□□□□ 0.11
SNX13-204ENST00000444712 PCDHGC4Q9Y5F7 938 aa15.71■□□□□ 0.11
SNX13-204ENST00000444712 PIRTP0C851 137 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 ATP5F1P24539 256 aaPredicted RBP15.7■□□□□ 0.1
SNX13-204ENST00000444712 EPHB1P54762 984 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 DNAJB13P59910 316 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 ELF3P78545 371 aaPredicted RBP15.7■□□□□ 0.1
SNX13-204ENST00000444712 TRAF2Q12933 501 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 CSHL1Q14406 222 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 ZNF460Q14592 562 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 ZNF789Q5FWF6 425 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 AARS2Q5JTZ9 985 aaKnown RBP15.7■□□□□ 0.1
SNX13-204ENST00000444712 GPR158Q5T848 1215 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 KIRREL3Q8IZU9 778 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 HEXDCQ8WVB3 486 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 POF1BQ8WVV4 589 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 STON2Q8WXE9 905 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 SLC46A2Q9BY10 475 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 CDH19Q9H159 772 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 CCDC68Q9H2F9 335 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 SPO11Q9Y5K1 396 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 OR51F1A6NGY5 319 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.7■□□□□ 0.1
SNX13-204ENST00000444712 F8W8V4 182 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 CCL22O00626 93 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 SCAMP3O14828 347 aaKnown RBP15.7■□□□□ 0.1
SNX13-204ENST00000444712 MGRN1O60291 552 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 NPHS1O60500 1241 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 HNRNPA1P09651 372 aaKnown RBP eCLIP15.7■□□□□ 0.1
SNX13-204ENST00000444712 SBK3P0C264 359 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 T-ENOLP0DO92 83 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 FDXRP22570 491 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 PRKAA1Q13131 559 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 TECRLQ5HYJ1 363 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 ARMC12Q5T9G4 340 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 PIWIL4Q7Z3Z4 852 aaKnown RBP15.7■□□□□ 0.1
SNX13-204ENST00000444712 RNF135Q8IUD6 432 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 SLC22A9Q8IVM8 553 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 MDGA1Q8NFP4 955 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 OR4K2Q8NGD2 314 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 SPPL3Q8TCT6 385 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 WFDC5Q8TCV5 224 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 UBXN10Q96LJ8 280 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 NSMCE3Q96MG7 304 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 NMUR2Q9GZQ4 415 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 SUDS3Q9H7L9 328 aaPredicted RBP15.7■□□□□ 0.1
SNX13-204ENST00000444712 IGSF5Q9NSI5 407 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 ABCB8Q9NUT2 735 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 NCKIPSDQ9NZQ3 722 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 DPP7Q9UHL4 492 aa15.7■□□□□ 0.1
SNX13-204ENST00000444712 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.7■□□□□ 0.1
SNX13-204ENST00000444712 FCF1Q9Y324 198 aaKnown RBP15.7■□□□□ 0.1
SNX13-204ENST00000444712 H7C0S8 307 aa15.69■□□□□ 0.1
SNX13-204ENST00000444712 STX7O15400 261 aaKnown RBP15.69■□□□□ 0.1
SNX13-204ENST00000444712 FZD6O60353 706 aa15.69■□□□□ 0.1
SNX13-204ENST00000444712 SOCS5O75159 536 aa15.69■□□□□ 0.1
SNX13-204ENST00000444712 XYLBO75191 536 aa15.69■□□□□ 0.1
SNX13-204ENST00000444712 CBX6O95503 412 aa15.69■□□□□ 0.1
SNX13-204ENST00000444712 IGSF6O95976 241 aa15.69■□□□□ 0.1
SNX13-204ENST00000444712 RB1P06400 928 aa15.69■□□□□ 0.1
SNX13-204ENST00000444712 PDHA1P08559 390 aa15.69■□□□□ 0.1
SNX13-204ENST00000444712 CCDC166P0CW27 439 aa15.69■□□□□ 0.1
SNX13-204ENST00000444712 SUOXP51687 545 aa15.69■□□□□ 0.1
SNX13-204ENST00000444712 KCNJ2P63252 427 aa15.69■□□□□ 0.1
SNX13-204ENST00000444712 LMAN2Q12907 356 aa15.69■□□□□ 0.1
SNX13-204ENST00000444712 DLG1Q12959 904 aa15.69■□□□□ 0.1
SNX13-204ENST00000444712 RIPK1Q13546 671 aa15.69■□□□□ 0.1
SNX13-204ENST00000444712 ELMSAN1Q6PJG2 1045 aa15.69■□□□□ 0.1
SNX13-204ENST00000444712 ALYREFQ86V81 257 aaKnown RBP15.69■□□□□ 0.1
SNX13-204ENST00000444712 PACS2Q86VP3 889 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms