RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 LENG8Q96PV6 779 aaPredicted RBP14.14□□□□□ -0.15
SSBP3-208ENST00000444533 MCCC1Q96RQ3 725 aaPredicted RBP14.14□□□□□ -0.15
SSBP3-208ENST00000444533 MYOCQ99972 504 aa14.14□□□□□ -0.15
SSBP3-208ENST00000444533 GPR63Q9BZJ6 419 aa14.14□□□□□ -0.15
SSBP3-208ENST00000444533 LRRC40Q9H9A6 602 aa14.14□□□□□ -0.15
SSBP3-208ENST00000444533 RAD18Q9NS91 495 aa14.14□□□□□ -0.15
SSBP3-208ENST00000444533 TMEM74BQ9NUR3 256 aa14.14□□□□□ -0.15
SSBP3-208ENST00000444533 HACD3Q9P035 362 aa14.14□□□□□ -0.15
SSBP3-208ENST00000444533 HS3ST3A1Q9Y663 406 aa14.14□□□□□ -0.15
SSBP3-208ENST00000444533 NUMA1Q14980 2115 aa14.14□□□□□ -0.15
SSBP3-208ENST00000444533 ANKRD36A6QL64 1941 aa14.13□□□□□ -0.15
SSBP3-208ENST00000444533 SDK1Q7Z5N4 2213 aa14.13□□□□□ -0.15
SSBP3-208ENST00000444533 NPIPB15A6NHN6 443 aaPredicted RBP14.13□□□□□ -0.15
SSBP3-208ENST00000444533 TOR1BO14657 336 aa14.13□□□□□ -0.15
SSBP3-208ENST00000444533 WNT9AO14904 365 aa14.13□□□□□ -0.15
SSBP3-208ENST00000444533 ZNF185O15231 689 aa14.13□□□□□ -0.15
SSBP3-208ENST00000444533 HEXIM1O94992 359 aaKnown RBP14.13□□□□□ -0.15
SSBP3-208ENST00000444533 ALPIP09923 528 aa14.13□□□□□ -0.15
SSBP3-208ENST00000444533 ITIH2P19823 946 aa14.13□□□□□ -0.15
SSBP3-208ENST00000444533 FNTAP49354 379 aa14.13□□□□□ -0.15
SSBP3-208ENST00000444533 CSNK1EP49674 416 aaKnown RBP14.13□□□□□ -0.15
SSBP3-208ENST00000444533 GDF10P55107 478 aa14.13□□□□□ -0.15
SSBP3-208ENST00000444533 SIX1Q15475 284 aaPredicted RBP14.13□□□□□ -0.15
SSBP3-208ENST00000444533 QPCTQ16769 361 aa14.13□□□□□ -0.15
SSBP3-208ENST00000444533 CCDC137Q6PK04 289 aaKnown RBP14.13□□□□□ -0.15
SSBP3-208ENST00000444533 PRR23CQ6ZRP0 262 aa14.13□□□□□ -0.15
SSBP3-208ENST00000444533 PTAR1Q7Z6K3 402 aaPredicted RBP14.13□□□□□ -0.15
SSBP3-208ENST00000444533 SLC25A41Q8N5S1 370 aa14.13□□□□□ -0.15
SSBP3-208ENST00000444533 MFSD2AQ8NA29 543 aa14.13□□□□□ -0.15
SSBP3-208ENST00000444533 VOPP1Q96AW1 172 aa14.13□□□□□ -0.15
SSBP3-208ENST00000444533 TADA1Q96BN2 335 aa14.13□□□□□ -0.15
SSBP3-208ENST00000444533 NUS1Q96E22 293 aa14.13□□□□□ -0.15
SSBP3-208ENST00000444533 NSMCE3Q96MG7 304 aa14.13□□□□□ -0.15
SSBP3-208ENST00000444533 FICDQ9BVA6 458 aa14.13□□□□□ -0.15
SSBP3-208ENST00000444533 GTPBP2Q9BX10 602 aaKnown RBP14.13□□□□□ -0.15
SSBP3-208ENST00000444533 TRABDQ9H4I3 376 aa14.13□□□□□ -0.15
SSBP3-208ENST00000444533 ZFYVE1Q9HBF4 777 aa14.13□□□□□ -0.15
SSBP3-208ENST00000444533 MAGEE1Q9HCI5 957 aa14.13□□□□□ -0.15
SSBP3-208ENST00000444533 PKD2L2Q9NZM6 624 aa14.13□□□□□ -0.15
SSBP3-208ENST00000444533 ARHGAP33O14559 1287 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 VILLO15195 856 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 SPINT1O43278 529 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 DFNA5O60443 496 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 PHF2O75151 1096 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 RECQL5O94762 991 aaPredicted RBP14.12□□□□□ -0.15
SSBP3-208ENST00000444533 CER1O95813 267 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 PRLP01236 227 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 PYGLP06737 847 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 RABIFP47224 123 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 THOP1P52888 689 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 SEMG2Q02383 582 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 PTK2BQ14289 1009 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 PPP1R7Q15435 360 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 SLC1A5Q15758 541 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 CNGA3Q16281 694 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 LRRC66Q68CR7 880 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 CRTC1Q6UUV9 634 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 KDELC1Q6UW63 502 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 ALYREFQ86V81 257 aaKnown RBP14.12□□□□□ -0.15
SSBP3-208ENST00000444533 RAVER1Q8IY67 606 aaKnown RBP14.12□□□□□ -0.15
SSBP3-208ENST00000444533 DCLK2Q8N568 766 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 OXR1Q8N573 874 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 PRELID2Q8N945 189 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 ZNF592Q92610 1267 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 OXNAD1Q96HP4 312 aaPredicted RBP14.12□□□□□ -0.15
SSBP3-208ENST00000444533 MRGPRX2Q96LB1 330 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 LYSMD1Q96S90 227 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 TBL1YQ9BQ87 522 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 FZD3Q9NPG1 666 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 GDF3Q9NR23 364 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 RAB6BQ9NRW1 208 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 ANKRD6Q9Y2G4 727 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 COQ6Q9Y2Z9 468 aa14.12□□□□□ -0.15
SSBP3-208ENST00000444533 LOC285095A0A1B0GVY8 99 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 RGSL1A5PLK6 1076 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 CCDC188H7C350 402 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 AP3B1O00203 1094 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 TLR4O00206 839 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 ECEL1O95672 775 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 SLC4A1P02730 911 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 PCCBP05166 539 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 ENGP17813 658 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 HTR1BP28222 390 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 COILP38432 576 aaPredicted RBP14.11□□□□□ -0.15
SSBP3-208ENST00000444533 KCNJ1P48048 391 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 IRX4P78413 519 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 BASP1P80723 227 aaKnown RBP14.11□□□□□ -0.15
SSBP3-208ENST00000444533 SARNPP82979 210 aaKnown RBP14.11□□□□□ -0.15
SSBP3-208ENST00000444533 ARHGAP8P85298 464 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 PDE1BQ01064 536 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 RALGDSQ12967 914 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 AGERQ15109 404 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 SF3A2Q15428 464 aaKnown RBP14.11□□□□□ -0.15
SSBP3-208ENST00000444533 CYP1B1Q16678 543 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 SIRPB2Q5JXA9 342 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 ZDHHC20Q5W0Z9 365 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 KYAT3Q6YP21 454 aaKnown RBP14.11□□□□□ -0.15
SSBP3-208ENST00000444533 PPP1R21Q6ZMI0 780 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 GLT6D1Q7Z4J2 308 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 NRSN1Q8IZ57 195 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms