RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 PCNX2A6NKB5 2137 aa12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 LOC285095A0A1B0GVY8 99 aa12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 K7ESM1 405 aa12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 SLC30A4O14863 429 aa12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 KCNN4O15554 427 aa12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 NRDCO43847 1150 aa12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 RECQL5O94762 991 aaPredicted RBP12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 PIRTP0C851 137 aa12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 CD59P13987 128 aa12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 GNSP15586 552 aa12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 PSMB4P28070 264 aa12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 MSLNQ13421 630 aaPredicted RBP12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 HLA-BQ31612 363 aa12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 ZNF569Q5MCW4 686 aa12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 ANKRD20A2Q5SQ80 823 aa12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 SEL1L2Q5TEA6 688 aa12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 ANKRD20A1Q5TYW2 823 aa12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 ANKRD20A3Q5VUR7 823 aa12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 KYAT3Q6YP21 454 aaKnown RBP12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 BZW1Q7L1Q6 419 aaKnown RBP12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 TECPR1Q7Z6L1 1165 aa12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 CDKL3Q8IVW4 592 aaPredicted RBP12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 MFSD2AQ8NA29 543 aa12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 DENND6BQ8NEG7 585 aa12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 NETO1Q8TDF5 533 aa12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 CXorf40AQ8TE69 158 aa12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 MS4A14Q96JA4 679 aa12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 SPATA13Q96N96 652 aa12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 TMEM121Q9BTD3 319 aa12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 GTPBP2Q9BX10 602 aaKnown RBP12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 KLHL8Q9P2G9 620 aaPredicted RBP12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 KLF15Q9UIH9 416 aa12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 TPX2Q9ULW0 747 aaKnown RBP12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 BPTFQ12830 3046 aa12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 COL5A1P20908 1838 aaPredicted RBP12.88□□□□□ -0.35
PDLIM2-212ENST00000443561 COL27A1Q8IZC6 1860 aaPredicted RBP12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 CFAP69A5D8W1 941 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 C5orf60A6NFR6 353 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 GOLGA8CPA6NN73 597 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 PRR5-ARHGAP8B1AHC4 643 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 TLR4O00206 839 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 NEMP1O14524 444 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 AURKAO14965 403 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 PMPCBO75439 489 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 TM7SF2O76062 418 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 METTL18O95568 372 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 ETS1P14921 441 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 CES1P23141 567 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 ADRA1AP35348 466 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 NUDT1P36639 197 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 STC1P52823 247 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 WNT3AP56704 352 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 PTSQ03393 145 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 CCDC15Q0P6D6 951 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 FZD2Q14332 565 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 PCSK7Q16549 785 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 CCDC181Q5TID7 509 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 LRRC66Q68CR7 880 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 KCTD11Q693B1 232 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 DARS2Q6PI48 645 aaKnown RBP12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 PID1Q7Z2X4 250 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 KDELC2Q7Z4H8 507 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 RABEPKQ7Z6M1 372 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 PIP4P1Q86T03 277 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 IQCHQ86VS3 1027 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 PRELID2Q8N945 189 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 FAM71DQ8N9W8 422 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 DTD2Q96FN9 168 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 TMEM9BQ9NQ34 198 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 KCND1Q9NSA2 647 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 BTBD3Q9Y2F9 522 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 HS3ST3A1Q9Y663 406 aa12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 CNOT1A5YKK6 2376 aaKnown RBP12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 ZFC3H1O60293 1989 aaKnown RBP12.87□□□□□ -0.35
PDLIM2-212ENST00000443561 A0A1B0GTQ1 180 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 A0A1W2PQ67 120 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 ANKRD66B4E2M5 251 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 ZNF185O15231 689 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 ZSCAN12O43309 604 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 MTSS1O43312 755 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 CLDN7O95471 211 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 FGGP02679 453 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 ELFN1P0C7U0 828 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 THEGLP0DJG4 465 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 GIMD1P0DJR0 217 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 XPAP23025 273 aaPredicted RBP12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 AKT2P31751 481 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 ETV3P41162 512 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 RPL26P61254 145 aaKnown RBP12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 IL9RQ01113 521 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 CDK18Q07002 472 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 EIF2B5Q13144 721 aaKnown RBP12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 CFAP58Q5T655 872 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 FAXCQ5TGI0 409 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 DENND5AQ6IQ26 1287 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 ERAP2Q6P179 960 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 TTC27Q6P3X3 843 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 DBX2Q6ZNG2 339 aa12.86□□□□□ -0.35
PDLIM2-212ENST00000443561 Q6ZSR6 202 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms