RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 DPYDQ12882 1025 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 NFATC3Q12968 1075 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 BTN1A1Q13410 526 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 APOFQ13790 326 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 MPP2Q14168 576 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 MORF4L2Q15014 288 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 ZNF174Q15697 407 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 GPR68Q15743 365 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 TBCCQ15814 346 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 STXBP2Q15833 593 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 SLC18A3Q16572 532 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 SWI5Q1ZZU3 235 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 CYP4A22Q5TCH4 519 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 FAM91A1Q658Y4 838 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 ARL6IP4Q66PJ3 421 aaKnown RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 DUPD1Q68J44 220 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 ANKRD26P1Q6NSI1 321 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 USP17L2Q6R6M4 530 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 TSSK4Q6SA08 328 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 HFE2Q6ZVN8 426 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 CEP68Q76N32 757 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 SLFN11Q7Z7L1 901 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 PLD3Q8IV08 490 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 COLGALT2Q8IYK4 626 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 SNX31Q8N9S9 440 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 TRPV3Q8NET8 790 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 HM13Q8TCT9 377 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 HASPINQ8TF76 798 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 FRS2Q8WU20 508 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 FBXW5Q969U6 566 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 MARC2Q969Z3 335 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 ZNF512BQ96KM6 892 aaPredicted RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 TEKT5Q96M29 485 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 PNMA5Q96PV4 448 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 UCN2Q96RP3 112 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 KLF6Q99612 283 aaPredicted RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 OSBPL11Q9BXB4 747 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 WDR11Q9BZH6 1224 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 PRM3Q9NNZ6 103 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 IFT46Q9NQC8 304 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 RIC8BQ9NVN3 520 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 CUEDC1Q9NWM3 386 aaPredicted RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 GLTPQ9NZD2 209 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 POLG2Q9UHN1 485 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 FKBPLQ9UIM3 349 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 BAG5Q9UL15 447 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 YBX2Q9Y2T7 364 aaKnown RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 ZNF532Q9HCE3 1301 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 ASCC3Q8N3C0 2202 aaKnown RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 ZMYM2Q9UBW7 1377 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 CROCCQ5TZA2 2017 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 CCDC195A0A1B0GUA6 201 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 DENND3A2RUS2 1198 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 TMEM191CA6NGB0 347 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 ZNF701M0R085 212 aaPredicted RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 ZNF213O14771 459 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 KIAA0391O15091 583 aaKnown RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 ZBTB24O43167 697 aaPredicted RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 FGF18O76093 207 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 TDP2O95551 362 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 SRCP12931 536 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 PRG2P13727 222 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 TCN1P20061 433 aaPredicted RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 MSH3P20585 1137 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 MUTP22033 750 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 ARNTP27540 789 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 GPC1P35052 558 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 RPA3P35244 121 aaPredicted RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 BMPR1AP36894 532 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 TALDO1P37837 337 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 TSPAN7P41732 249 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 CASP3P42574 277 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 KCNJ1P48048 391 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 STARP49675 285 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 TPMTP51580 245 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 PGDP52209 483 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 TBX4P57082 545 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 ABATP80404 500 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 GUCA2AQ02747 115 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 KLRC3Q07444 240 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 MAN2A1Q16706 1144 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 DGUOKQ16854 277 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 LY6KQ17RY6 165 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 MAJINQ3KP22 176 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 INAVAQ3KP66 663 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 ZNF792Q3KQV3 632 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 KLHL12Q53G59 568 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 DGKKQ5KSL6 1271 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 MPP7Q5T2T1 576 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 TYW3Q6IPR3 259 aaKnown RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 ZFP1Q6P2D0 407 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 POMZP3Q6PJE2 187 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 ZBTB49Q6ZSB9 765 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 KIAA0408Q6ZU52 694 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 C16orf86Q6ZW13 317 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 SNX20Q7Z614 316 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 DGKHQ86XP1 1220 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 HPS6Q86YV9 775 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 HID1Q8IV36 788 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 CCDC60Q8IWA6 550 aaPredicted RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms