RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 NUDCD3Q8IVD9 361 aa18.8■□□□□ 0.6
POLR1E-203ENST00000442009 PDCD6IPQ8WUM4 868 aaKnown RBP18.8■□□□□ 0.6
POLR1E-203ENST00000442009 SCG3Q8WXD2 468 aaKnown RBP18.8■□□□□ 0.6
POLR1E-203ENST00000442009 ABHD8Q96I13 439 aa18.8■□□□□ 0.6
POLR1E-203ENST00000442009 ASB16Q96NS5 453 aa18.8■□□□□ 0.6
POLR1E-203ENST00000442009 CEP44Q9C0F1 390 aa18.8■□□□□ 0.6
POLR1E-203ENST00000442009 TNKS2Q9H2K2 1166 aa18.8■□□□□ 0.6
POLR1E-203ENST00000442009 H7C0S8 307 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 PHGDHO43175 533 aaKnown RBP18.79■□□□□ 0.6
POLR1E-203ENST00000442009 IGSF6O95976 241 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 OGNP20774 298 aaKnown RBP18.79■□□□□ 0.6
POLR1E-203ENST00000442009 VIPR2P41587 438 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 PGGT1BP53609 377 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 ECT2LQ008S8 904 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 PCLAFQ15004 111 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 TYSND1Q2T9J0 566 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 EML3Q32P44 896 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 RBM20Q5T481 1227 aaKnown RBP18.79■□□□□ 0.6
POLR1E-203ENST00000442009 LDB1Q86U70 411 aaPredicted RBP18.79■□□□□ 0.6
POLR1E-203ENST00000442009 CENPLQ8N0S6 344 aaPredicted RBP18.79■□□□□ 0.6
POLR1E-203ENST00000442009 OR6Y1Q8NGX8 325 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 OR6K2Q8NGY2 324 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 OSCP1Q8WVF1 389 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 E2F7Q96AV8 911 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 EID2BQ96D98 161 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 MRPL38Q96DV4 380 aaKnown RBP18.79■□□□□ 0.6
POLR1E-203ENST00000442009 MYO19Q96H55 970 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 GPR78Q96P69 363 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 SLC28A3Q9HAS3 691 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 SNNO75324 88 aaPredicted RBP18.79■□□□□ 0.6
POLR1E-203ENST00000442009 WISP3O95389 354 aaPredicted RBP18.79■□□□□ 0.6
POLR1E-203ENST00000442009 CYP17A1P05093 508 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 CISD3P0C7P0 127 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 STMN1P16949 149 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 GKP32189 559 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 SNRPD1P62314 119 aaKnown RBP18.79■□□□□ 0.6
POLR1E-203ENST00000442009 BCL2L1Q07817 233 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 BST1Q10588 318 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 IFT88Q13099 833 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 CDKN3Q16667 212 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 MYLK3Q32MK0 819 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 FASTKD1Q53R41 847 aaKnown RBP18.79■□□□□ 0.6
POLR1E-203ENST00000442009 MBLAC2Q68D91 279 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 MRNIPQ6NTE8 343 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 C22orf39Q6P5X5 142 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 GPR149Q86SP6 731 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 PLPP6Q8IY26 295 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 CCDC63Q8NA47 563 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 FGF13Q92913 245 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 ECHDC3Q96DC8 303 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 C19orf43Q9BQ61 176 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 TSSK1BQ9BXA7 367 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 CPEB1Q9BZB8 566 aaKnown RBP18.79■□□□□ 0.6
POLR1E-203ENST00000442009 TRPV4Q9HBA0 871 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 IL17CQ9P0M4 197 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 COPG2Q9UBF2 871 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 SLCO3A1Q9UIG8 710 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 TLK1Q9UKI8 766 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 ARL2BPQ9Y2Y0 163 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 ACOT9Q9Y305 439 aa18.79■□□□□ 0.6
POLR1E-203ENST00000442009 DOCK8Q8NF50 2099 aa18.78■□□□□ 0.6
POLR1E-203ENST00000442009 KIF26AQ9ULI4 1882 aaPredicted RBP18.78■□□□□ 0.6
POLR1E-203ENST00000442009 RFXAPO00287 272 aa18.78■□□□□ 0.6
POLR1E-203ENST00000442009 TRIM24O15164 1050 aa18.78■□□□□ 0.6
POLR1E-203ENST00000442009 HOXC11O43248 304 aaPredicted RBP18.78■□□□□ 0.6
POLR1E-203ENST00000442009 PIGNO95427 931 aa18.78■□□□□ 0.6
POLR1E-203ENST00000442009 TGDSO95455 350 aa18.78■□□□□ 0.6
POLR1E-203ENST00000442009 BMP1P13497 986 aa18.78■□□□□ 0.6
POLR1E-203ENST00000442009 ALDH3A1P30838 453 aa18.78■□□□□ 0.6
POLR1E-203ENST00000442009 OCRLQ01968 901 aa18.78■□□□□ 0.6
POLR1E-203ENST00000442009 SF3A3Q12874 501 aaKnown RBP eCLIP18.78■□□□□ 0.6
POLR1E-203ENST00000442009 PCDH20Q8N6Y1 951 aaKnown RBP18.78■□□□□ 0.6
POLR1E-203ENST00000442009 SMARCD2Q92925 531 aa18.78■□□□□ 0.6
POLR1E-203ENST00000442009 TUBGCP5Q96RT8 1024 aa18.78■□□□□ 0.6
POLR1E-203ENST00000442009 OLFM1Q99784 485 aa18.78■□□□□ 0.6
POLR1E-203ENST00000442009 ATP13A3Q9H7F0 1226 aa18.78■□□□□ 0.6
POLR1E-203ENST00000442009 CATSPERZQ9NTU4 200 aa18.78■□□□□ 0.6
POLR1E-203ENST00000442009 DUS2Q9NX74 493 aaKnown RBP18.78■□□□□ 0.6
POLR1E-203ENST00000442009 A0A0J9YYE9 177 aa18.77■□□□□ 0.6
POLR1E-203ENST00000442009 TARM1B6A8C7 271 aa18.77■□□□□ 0.6
POLR1E-203ENST00000442009 G3V2L1 256 aa18.77■□□□□ 0.6
POLR1E-203ENST00000442009 TRBC1P01850 177 aa18.77■□□□□ 0.6
POLR1E-203ENST00000442009 SBK3P0C264 359 aa18.77■□□□□ 0.6
POLR1E-203ENST00000442009 FGF3P11487 239 aaPredicted RBP18.77■□□□□ 0.6
POLR1E-203ENST00000442009 FSHRP23945 695 aa18.77■□□□□ 0.6
POLR1E-203ENST00000442009 HMGCLP35914 325 aa18.77■□□□□ 0.6
POLR1E-203ENST00000442009 VASPP50552 380 aaPredicted RBP18.77■□□□□ 0.6
POLR1E-203ENST00000442009 STC1P52823 247 aa18.77■□□□□ 0.6
POLR1E-203ENST00000442009 IRX4P78413 519 aa18.77■□□□□ 0.6
POLR1E-203ENST00000442009 CHI3L2Q15782 390 aa18.77■□□□□ 0.6
POLR1E-203ENST00000442009 ATG16L1Q676U5 607 aa18.77■□□□□ 0.6
POLR1E-203ENST00000442009 ZNF549Q6P9A3 640 aa18.77■□□□□ 0.6
POLR1E-203ENST00000442009 AFTPHQ6ULP2 937 aa18.77■□□□□ 0.6
POLR1E-203ENST00000442009 RAPH1Q70E73 1250 aa18.77■□□□□ 0.6
POLR1E-203ENST00000442009 ZSWIM9Q86XI8 627 aa18.77■□□□□ 0.6
POLR1E-203ENST00000442009 AHI1Q8N157 1196 aa18.77■□□□□ 0.6
POLR1E-203ENST00000442009 GPATCH11Q8N954 259 aa18.77■□□□□ 0.6
POLR1E-203ENST00000442009 CCT6BQ92526 530 aa18.77■□□□□ 0.6
POLR1E-203ENST00000442009 ASIC4Q96FT7 647 aa18.77■□□□□ 0.6
POLR1E-203ENST00000442009 ELMO2Q96JJ3 720 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms