RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 ASRGL1Q7L266 308 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 PIWIL4Q7Z3Z4 852 aaKnown RBP13.2□□□□□ -0.3
CPSF4-206ENST00000441580 MTDHQ86UE4 582 aaKnown RBP13.2□□□□□ -0.3
CPSF4-206ENST00000441580 CEP97Q8IW35 865 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 CMTM8Q8IZV2 173 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 TNS4Q8IZW8 715 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 FSTL5Q8N475 847 aaPredicted RBP13.2□□□□□ -0.3
CPSF4-206ENST00000441580 DNAJC5GQ8N7S2 189 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 OR13C4Q8NGS5 318 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 SPPL3Q8TCT6 385 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 WFDC5Q8TCV5 224 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 SH3RF2Q8TEC5 729 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 SLC22A17Q8WUG5 538 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.2□□□□□ -0.3
CPSF4-206ENST00000441580 TBATAQ96M53 351 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 SORT1Q99523 831 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 NDNQ99608 321 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 GPAMQ9HCL2 828 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 ZNF358Q9NW07 568 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 ZDHHC7Q9NXF8 308 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 MARCH4Q9P2E8 410 aaPredicted RBP13.2□□□□□ -0.3
CPSF4-206ENST00000441580 MARCOQ9UEW3 520 aaPredicted RBP13.2□□□□□ -0.3
CPSF4-206ENST00000441580 LNPEPQ9UIQ6 1025 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 SPO11Q9Y5K1 396 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 NUP210Q8TEM1 1887 aaPredicted RBP13.2□□□□□ -0.3
CPSF4-206ENST00000441580 CCDC189A1A4V9 331 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 LCHNA4D1U4 455 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 HIDE1A8MVS5 230 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 ANKRD66B4E2M5 251 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 H7C0S8 307 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 FCHO1O14526 889 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 TRAFD1O14545 582 aaPredicted RBP13.19□□□□□ -0.3
CPSF4-206ENST00000441580 SCAMP3O14828 347 aaKnown RBP13.19□□□□□ -0.3
CPSF4-206ENST00000441580 HGSO14964 777 aaPredicted RBP13.19□□□□□ -0.3
CPSF4-206ENST00000441580 AURKAO14965 403 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 FZD6O60353 706 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 NPHS1O60500 1241 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 LYPLA1O75608 230 aaPredicted RBP13.19□□□□□ -0.3
CPSF4-206ENST00000441580 PGLSO95336 258 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 WISP3O95389 354 aaPredicted RBP13.19□□□□□ -0.3
CPSF4-206ENST00000441580 PRLP01236 227 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 HSPA1AP0DMV8 641 aaKnown RBP13.19□□□□□ -0.3
CPSF4-206ENST00000441580 HSPA1BP0DMV9 641 aaKnown RBP13.19□□□□□ -0.3
CPSF4-206ENST00000441580 ATP5F1P24539 256 aaPredicted RBP13.19□□□□□ -0.3
CPSF4-206ENST00000441580 EPHB1P54762 984 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 DNAJB13P59910 316 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 DMC1Q14565 340 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 ZNF460Q14592 562 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 CFAP157Q5JU67 520 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 SLC22A9Q8IVM8 553 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 AFAP1L2Q8N4X5 818 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 KIAA1958Q8N8K9 716 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 PDCD6IPQ8WUM4 868 aaKnown RBP13.19□□□□□ -0.3
CPSF4-206ENST00000441580 OTUB2Q96DC9 234 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 GPR78Q96P69 363 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 TMEM237Q96Q45 408 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 TUBGCP5Q96RT8 1024 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 OLFM1Q99784 485 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 SLC46A2Q9BY10 475 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 DRC3Q9H069 523 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 CDH19Q9H159 772 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 CCDC68Q9H2F9 335 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 ATP13A3Q9H7F0 1226 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 IGSF5Q9NSI5 407 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 ABCB8Q9NUT2 735 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 TBC1D14Q9P2M4 693 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 HAO1Q9UJM8 370 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 SLC25A13Q9UJS0 675 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 RUVBL2Q9Y230 463 aaKnown RBP13.19□□□□□ -0.3
CPSF4-206ENST00000441580 APOBEC2Q9Y235 224 aaKnown RBP13.19□□□□□ -0.3
CPSF4-206ENST00000441580 FCF1Q9Y324 198 aaKnown RBP13.19□□□□□ -0.3
CPSF4-206ENST00000441580 VWA7Q9Y334 891 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 ZNF711Q9Y462 761 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 KCTD3Q9Y597 815 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 COMMD10Q9Y6G5 202 aa13.19□□□□□ -0.3
CPSF4-206ENST00000441580 KIAA0100Q14667 2235 aaKnown RBP13.19□□□□□ -0.3
CPSF4-206ENST00000441580 OR51F1A6NGY5 319 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 TARM1B6A8C7 271 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 SLCO1B7G3V0H7 640 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 CCL22O00626 93 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 GRM6O15303 877 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 STX7O15400 261 aaKnown RBP13.18□□□□□ -0.3
CPSF4-206ENST00000441580 ITM2AO43736 263 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 RASSF9O75901 435 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 PENKP01210 267 aaPredicted RBP13.18□□□□□ -0.3
CPSF4-206ENST00000441580 RHOP08100 348 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 SERPINA6P08185 405 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 PIRTP0C851 137 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 CALB2P22676 271 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 TARSP26639 723 aaKnown RBP13.18□□□□□ -0.3
CPSF4-206ENST00000441580 GLRBP48167 497 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 TTPAP49638 278 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 NUMBP49757 651 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 PFKPQ01813 784 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 SULT2A1Q06520 285 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 PRKAA1Q13131 559 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 CSHL1Q14406 222 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 ACAP2Q15057 778 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 TEAD2Q15562 447 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 PITRM1Q5JRX3 1037 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms