RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 RAB2BQ8WUD1 216 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 KHSRPQ92945 711 aaKnown RBP eCLIP11.95□□□□□ -0.5
LTBR-203ENST00000441074 CENPNQ96H22 339 aaPredicted RBP11.95□□□□□ -0.5
LTBR-203ENST00000441074 FBXL20Q96IG2 436 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 VPS39Q96JC1 886 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 SCYL1Q96KG9 808 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 ALPK1Q96QP1 1244 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 LGMNQ99538 433 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 SLC25A23Q9BV35 468 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 LRRC4Q9HBW1 653 aa11.95□□□□□ -0.5
LTBR-203ENST00000441074 RUVBL2Q9Y230 463 aaKnown RBP11.95□□□□□ -0.5
LTBR-203ENST00000441074 MBLAC1A4D2B0 266 aaPredicted RBP11.94□□□□□ -0.5
LTBR-203ENST00000441074 NRP1O14786 923 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 KDM1AO60341 852 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 SEC14L2O76054 403 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 CYBAP13498 195 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 IGFBP6P24592 240 aaPredicted RBP11.94□□□□□ -0.5
LTBR-203ENST00000441074 FASP25445 335 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 ETFBP38117 255 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 RGS7P49802 495 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 INPP5AQ14642 412 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 ZNF846Q147U1 533 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 CLPPQ16740 277 aaPredicted RBP11.94□□□□□ -0.5
LTBR-203ENST00000441074 CCNYL2Q5T2Q4 361 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 CTU1Q7Z7A3 348 aaKnown RBP11.94□□□□□ -0.5
LTBR-203ENST00000441074 FAM110BQ8TC76 370 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 SPPL2BQ8TCT7 592 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 C18orf25Q96B23 403 aaPredicted RBP11.94□□□□□ -0.5
LTBR-203ENST00000441074 KCTD15Q96SI1 283 aaPredicted RBP11.94□□□□□ -0.5
LTBR-203ENST00000441074 TRIM15Q9C019 465 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 CACNG4Q9UBN1 327 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 SLC39A10Q9ULF5 831 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 AP4E1Q9UPM8 1137 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 COL1A2P08123 1366 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 MEIS3P2A8K0S8 358 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 TMEM233B4DJY2 109 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 HAS3O00219 553 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 UBDO15205 165 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 ACOX3O15254 700 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 NRP2O60462 931 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 CLIC3O95833 236 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 F7P08709 466 aaPredicted RBP11.94□□□□□ -0.5
LTBR-203ENST00000441074 ALOX5P09917 674 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 HDCP19113 662 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 KPNA1P52294 538 aaPredicted RBP11.94□□□□□ -0.5
LTBR-203ENST00000441074 SLC7A2P52569 658 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 IRF5Q13568 498 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 PHKG1Q16816 387 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 TMTC4Q5T4D3 741 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 ZNF618Q5T7W0 954 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 PMF1Q6P1K2 205 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 ZNF773Q6PK81 442 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 CADM3Q8N126 398 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 TMCO5AQ8N6Q1 288 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 OR52K1Q8NGK4 314 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 CENPIQ92674 756 aaPredicted RBP11.94□□□□□ -0.5
LTBR-203ENST00000441074 P2RY11Q96G91 374 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 FAR2Q96K12 515 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 GPR22Q99680 433 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 MTG1Q9BT17 334 aaPredicted RBP11.94□□□□□ -0.5
LTBR-203ENST00000441074 C11orf84Q9BUA3 381 aaPredicted RBP11.94□□□□□ -0.5
LTBR-203ENST00000441074 SEZ6LQ9BYH1 1024 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 TRPV5Q9NQA5 729 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 DPP3Q9NY33 737 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 BFARQ9NZS9 450 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 AURKCQ9UQB9 309 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 PIN4Q9Y237 131 aaKnown RBP11.94□□□□□ -0.5
LTBR-203ENST00000441074 MFHAS1Q9Y4C4 1052 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 RAD54BQ9Y620 910 aa11.94□□□□□ -0.5
LTBR-203ENST00000441074 DHRS12A0PJE2 317 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 RRN3P2A6NIE6 340 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 CAPN15O75808 1086 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 MBL2P11226 248 aaPredicted RBP11.93□□□□□ -0.5
LTBR-203ENST00000441074 PRKAR2AP13861 404 aaKnown RBP11.93□□□□□ -0.5
LTBR-203ENST00000441074 DARSP14868 501 aaKnown RBP11.93□□□□□ -0.5
LTBR-203ENST00000441074 LRPAP1P30533 357 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 GLUD2P49448 558 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 CCT8P50990 548 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 MLLT10P55197 1068 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 PRMT2P55345 433 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 IFRD2Q12894 506 aaPredicted RBP11.93□□□□□ -0.5
LTBR-203ENST00000441074 SNX17Q15036 470 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 USP51Q70EK9 711 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 SLC26A9Q7LBE3 791 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 NANOGNBQ7Z5D8 188 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 ZBTB46Q86UZ6 589 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 PSTKQ8IV42 348 aaKnown RBP11.93□□□□□ -0.5
LTBR-203ENST00000441074 FSTL5Q8N475 847 aaPredicted RBP11.93□□□□□ -0.5
LTBR-203ENST00000441074 CCNYL1Q8N7R7 359 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 SLC35F5Q8WV83 523 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 GLT1D1Q96MS3 346 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 PGLYRP2Q96PD5 576 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 MAGEB5Q9BZ81 275 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 GBA3Q9H227 469 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 RAD21L1Q9H4I0 556 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 GOLGA2P5Q9HBQ8 144 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 CCDC167Q9P0B6 97 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 C17orf102A2RUQ5 167 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 FAM149AA5PLN7 773 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 CLDN25C9JDP6 229 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms