RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 ARSEP51690 589 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 CDH6P55285 790 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 MAXP61244 160 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 TRAF2Q12933 501 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 MMRN1Q13201 1228 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 TCEA2Q15560 299 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 CNGA3Q16281 694 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 CCDC122Q5T0U0 273 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 IGF2-ASQ6U949 168 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 RBM44Q6ZP01 1051 aaKnown RBP16.86■□□□□ 0.29
COL16A1-204ENST00000440437 RD3Q7Z3Z2 195 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 GKN2Q86XP6 184 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 LSMEM2Q8N112 164 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 PAF1Q8N7H5 531 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 OR56A4Q8NGH8 313 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 WDR48Q8TAF3 677 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 OR1E3Q8WZA6 343 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 GRAMD1AQ96CP6 724 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 HIC2Q96JB3 615 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 COQ10AQ96MF6 247 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 BBC3Q96PG8 261 aaPredicted RBP16.86■□□□□ 0.29
COL16A1-204ENST00000440437 PRORYQ9H606 182 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 NOD2Q9HC29 1040 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 FGF22Q9HCT0 170 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 ASCL3Q9NQ33 180 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 DOLKQ9UPQ8 538 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 BPTFQ12830 3046 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 A8MX80 341 aa16.85■□□□□ 0.29
COL16A1-204ENST00000440437 MYO1FO00160 1098 aa16.85■□□□□ 0.29
COL16A1-204ENST00000440437 CACNB4O00305 520 aaPredicted RBP16.85■□□□□ 0.29
COL16A1-204ENST00000440437 NTN3O00634 580 aaPredicted RBP16.85■□□□□ 0.29
COL16A1-204ENST00000440437 MFSD11O43934 449 aa16.85■□□□□ 0.29
COL16A1-204ENST00000440437 TNFP01375 233 aa16.85■□□□□ 0.29
COL16A1-204ENST00000440437 HNRNPH3P31942 346 aaKnown RBP16.85■□□□□ 0.29
COL16A1-204ENST00000440437 CASP14P31944 242 aa16.85■□□□□ 0.29
COL16A1-204ENST00000440437 VIPR1P32241 457 aa16.85■□□□□ 0.29
COL16A1-204ENST00000440437 MMP13P45452 471 aa16.85■□□□□ 0.29
COL16A1-204ENST00000440437 ERVPABLB-1P60509 514 aa16.85■□□□□ 0.29
COL16A1-204ENST00000440437 NFKBIBQ15653 356 aa16.85■□□□□ 0.29
COL16A1-204ENST00000440437 RALGPS1Q5JS13 557 aa16.85■□□□□ 0.29
COL16A1-204ENST00000440437 NCBP2-AS2Q69YL0 99 aa16.85■□□□□ 0.29
COL16A1-204ENST00000440437 CPNE8Q86YQ8 564 aa16.85■□□□□ 0.29
COL16A1-204ENST00000440437 CBARPQ8N350 705 aaPredicted RBP16.85■□□□□ 0.29
COL16A1-204ENST00000440437 BBS5Q8N3I7 341 aa16.85■□□□□ 0.29
COL16A1-204ENST00000440437 TEX26Q8N6G2 289 aa16.85■□□□□ 0.29
COL16A1-204ENST00000440437 ZNF564Q8TBZ8 553 aaPredicted RBP16.85■□□□□ 0.29
COL16A1-204ENST00000440437 ATXN7L3BQ96GX2 97 aa16.85■□□□□ 0.29
COL16A1-204ENST00000440437 LGR4Q9BXB1 951 aa16.85■□□□□ 0.29
COL16A1-204ENST00000440437 SIRPGQ9P1W8 387 aa16.85■□□□□ 0.29
COL16A1-204ENST00000440437 RABGEF1Q9UJ41 708 aa16.85■□□□□ 0.29
COL16A1-204ENST00000440437 GPR34Q9UPC5 381 aa16.85■□□□□ 0.29
COL16A1-204ENST00000440437 SATB2Q9UPW6 733 aa16.85■□□□□ 0.29
COL16A1-204ENST00000440437 TNFRSF10CO14798 259 aa16.84■□□□□ 0.29
COL16A1-204ENST00000440437 HEXIM1O94992 359 aaKnown RBP16.84■□□□□ 0.29
COL16A1-204ENST00000440437 LHCGRP22888 699 aa16.84■□□□□ 0.29
COL16A1-204ENST00000440437 PCBP4P57723 403 aaKnown RBP16.84■□□□□ 0.29
COL16A1-204ENST00000440437 TLE3Q04726 772 aa16.84■□□□□ 0.29
COL16A1-204ENST00000440437 CCDC173Q0VFZ6 552 aa16.84■□□□□ 0.29
COL16A1-204ENST00000440437 DPYSL3Q14195 570 aa16.84■□□□□ 0.29
COL16A1-204ENST00000440437 KRT81Q14533 505 aa16.84■□□□□ 0.29
COL16A1-204ENST00000440437 ACOX1Q15067 660 aa16.84■□□□□ 0.29
COL16A1-204ENST00000440437 PAFAH1B3Q15102 231 aaKnown RBP16.84■□□□□ 0.29
COL16A1-204ENST00000440437 ZSCAN23Q3MJ62 389 aa16.84■□□□□ 0.29
COL16A1-204ENST00000440437 ATP13A4Q4VNC1 1196 aa16.84■□□□□ 0.29
COL16A1-204ENST00000440437 C3orf38Q5JPI3 329 aa16.84■□□□□ 0.29
COL16A1-204ENST00000440437 MARC1Q5VT66 337 aa16.84■□□□□ 0.29
COL16A1-204ENST00000440437 PNCKQ6P2M8 343 aa16.84■□□□□ 0.29
COL16A1-204ENST00000440437 LRRC49Q8IUZ0 686 aa16.84■□□□□ 0.29
COL16A1-204ENST00000440437 SPACA3Q8IXA5 215 aa16.84■□□□□ 0.29
COL16A1-204ENST00000440437 ZNF248Q8NDW4 579 aa16.84■□□□□ 0.29
COL16A1-204ENST00000440437 GPR156Q8NFN8 814 aa16.84■□□□□ 0.29
COL16A1-204ENST00000440437 PDCD6IPQ8WUM4 868 aaKnown RBP16.84■□□□□ 0.29
COL16A1-204ENST00000440437 NSMCE1Q8WV22 266 aa16.84■□□□□ 0.29
COL16A1-204ENST00000440437 SCG3Q8WXD2 468 aaKnown RBP16.84■□□□□ 0.29
COL16A1-204ENST00000440437 CCDC74AQ96AQ1 378 aa16.84■□□□□ 0.29
COL16A1-204ENST00000440437 NUS1Q96E22 293 aa16.84■□□□□ 0.29
COL16A1-204ENST00000440437 PRR11Q96HE9 360 aaPredicted RBP16.84■□□□□ 0.29
COL16A1-204ENST00000440437 XPO4Q9C0E2 1151 aaKnown RBP16.84■□□□□ 0.29
COL16A1-204ENST00000440437 WDR26Q9H7D7 661 aa16.84■□□□□ 0.29
COL16A1-204ENST00000440437 MRPL40Q9NQ50 206 aaKnown RBP16.84■□□□□ 0.29
COL16A1-204ENST00000440437 GULP1Q9UBP9 304 aa16.84■□□□□ 0.29
COL16A1-204ENST00000440437 PHTF1Q9UMS5 762 aa16.84■□□□□ 0.29
COL16A1-204ENST00000440437 PPIL1Q9Y3C6 166 aa16.84■□□□□ 0.29
COL16A1-204ENST00000440437 RAI2Q9Y5P3 530 aa16.84■□□□□ 0.29
COL16A1-204ENST00000440437 ZFC3H1O60293 1989 aaKnown RBP16.84■□□□□ 0.29
COL16A1-204ENST00000440437 NPIPB15A6NHN6 443 aaPredicted RBP16.83■□□□□ 0.28
COL16A1-204ENST00000440437 FZD6O60353 706 aa16.83■□□□□ 0.28
COL16A1-204ENST00000440437 PGLSO95336 258 aa16.83■□□□□ 0.28
COL16A1-204ENST00000440437 KELP23276 732 aa16.83■□□□□ 0.28
COL16A1-204ENST00000440437 GARSP41250 739 aaKnown RBP16.83■□□□□ 0.28
COL16A1-204ENST00000440437 GALNT2Q10471 571 aa16.83■□□□□ 0.28
COL16A1-204ENST00000440437 COL9A2Q14055 689 aaPredicted RBP16.83■□□□□ 0.28
COL16A1-204ENST00000440437 SPIDRQ14159 915 aa16.83■□□□□ 0.28
COL16A1-204ENST00000440437 HADHQ16836 314 aaKnown RBP16.83■□□□□ 0.28
COL16A1-204ENST00000440437 ALG1LQ6GMV1 187 aa16.83■□□□□ 0.28
COL16A1-204ENST00000440437 MAML1Q92585 1016 aa16.83■□□□□ 0.28
COL16A1-204ENST00000440437 DTD2Q96FN9 168 aa16.83■□□□□ 0.28
COL16A1-204ENST00000440437 MCCC1Q96RQ3 725 aaPredicted RBP16.83■□□□□ 0.28
COL16A1-204ENST00000440437 ZNF670Q9BS34 389 aa16.83■□□□□ 0.28
COL16A1-204ENST00000440437 PACSIN1Q9BY11 444 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms