RNA–Protein interactions for RNA: ENST00000440293.5

HDAC7-213, Transcript of histone deacetylase 7, human

TSL 4

Gene HDAC7, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-213	ENST00000440293	HTRA2	O43464	458 aa	Predicted RBP	18.18	■□□□□ 0.5
HDAC7-213	ENST00000440293	SOCS5	O75159	536 aa		18.18	■□□□□ 0.5
HDAC7-213	ENST00000440293	PAK4	O96013	591 aa	Predicted RBP	18.18	■□□□□ 0.5
HDAC7-213	ENST00000440293	CKMT2	P17540	419 aa		18.18	■□□□□ 0.5
HDAC7-213	ENST00000440293	ITIH2	P19823	946 aa		18.18	■□□□□ 0.5
HDAC7-213	ENST00000440293	AKT2	P31751	481 aa		18.18	■□□□□ 0.5
HDAC7-213	ENST00000440293	ADCY2	Q08462	1091 aa		18.18	■□□□□ 0.5
HDAC7-213	ENST00000440293	TMEM52B	Q4KMG9	183 aa		18.18	■□□□□ 0.5
HDAC7-213	ENST00000440293	CCDC157	Q569K6	752 aa		18.18	■□□□□ 0.5
HDAC7-213	ENST00000440293	LRRC73	Q5JTD7	316 aa		18.18	■□□□□ 0.5
HDAC7-213	ENST00000440293	BBS12	Q6ZW61	710 aa		18.18	■□□□□ 0.5
HDAC7-213	ENST00000440293	CXorf40A	Q8TE69	158 aa		18.18	■□□□□ 0.5
HDAC7-213	ENST00000440293	ASB12	Q8WXK4	309 aa		18.18	■□□□□ 0.5
HDAC7-213	ENST00000440293	ALG3	Q92685	438 aa		18.18	■□□□□ 0.5
HDAC7-213	ENST00000440293	IL12RB2	Q99665	862 aa		18.18	■□□□□ 0.5
HDAC7-213	ENST00000440293	OSBPL8	Q9BZF1	889 aa		18.18	■□□□□ 0.5
HDAC7-213	ENST00000440293	PRORY	Q9H606	182 aa		18.18	■□□□□ 0.5
HDAC7-213	ENST00000440293	PCDH12	Q9NPG4	1184 aa		18.18	■□□□□ 0.5
HDAC7-213	ENST00000440293	SAE1	Q9UBE0	346 aa	Predicted RBP	18.18	■□□□□ 0.5
HDAC7-213	ENST00000440293	GGT7	Q9UJ14	662 aa		18.18	■□□□□ 0.5
HDAC7-213	ENST00000440293	ITM2B	Q9Y287	266 aa		18.18	■□□□□ 0.5
HDAC7-213	ENST00000440293	ATP8A1	Q9Y2Q0	1164 aa		18.18	■□□□□ 0.5
HDAC7-213	ENST00000440293	RIOK3	O14730	519 aa	Known RBP	18.17	■□□□□ 0.5
HDAC7-213	ENST00000440293	SPINT1	O43278	529 aa		18.17	■□□□□ 0.5
HDAC7-213	ENST00000440293	MMP20	O60882	483 aa		18.17	■□□□□ 0.5
HDAC7-213	ENST00000440293	FTCD	O95954	541 aa		18.17	■□□□□ 0.5
HDAC7-213	ENST00000440293	PYGM	P11217	842 aa		18.17	■□□□□ 0.5
HDAC7-213	ENST00000440293	PRLR	P16471	622 aa		18.17	■□□□□ 0.5
HDAC7-213	ENST00000440293	HNRNPA2B1	P22626	353 aa	Known RBP	18.17	■□□□□ 0.5
HDAC7-213	ENST00000440293	PTPN7	P35236	360 aa		18.17	■□□□□ 0.5
HDAC7-213	ENST00000440293	IFI35	P80217	286 aa	Predicted RBP	18.17	■□□□□ 0.5
HDAC7-213	ENST00000440293	TARDBP	Q13148	414 aa	Known RBP eCLIP	18.17	■□□□□ 0.5
HDAC7-213	ENST00000440293	CCDC181	Q5TID7	509 aa		18.17	■□□□□ 0.5
HDAC7-213	ENST00000440293	ALG1L	Q6GMV1	187 aa		18.17	■□□□□ 0.5
HDAC7-213	ENST00000440293	ZSWIM9	Q86XI8	627 aa		18.17	■□□□□ 0.5
HDAC7-213	ENST00000440293	EID2	Q8N6I1	236 aa		18.17	■□□□□ 0.5
HDAC7-213	ENST00000440293	PDCD6IP	Q8WUM4	868 aa	Known RBP	18.17	■□□□□ 0.5
HDAC7-213	ENST00000440293	TFB1M	Q8WVM0	346 aa	Known RBP	18.17	■□□□□ 0.5
HDAC7-213	ENST00000440293	SPOCK2	Q92563	424 aa		18.17	■□□□□ 0.5
HDAC7-213	ENST00000440293	PACSIN2	Q9UNF0	486 aa	Predicted RBP	18.17	■□□□□ 0.5
HDAC7-213	ENST00000440293	TTLL3	Q9Y4R7	772 aa		18.17	■□□□□ 0.5
HDAC7-213	ENST00000440293	HS3ST3A1	Q9Y663	406 aa		18.17	■□□□□ 0.5
HDAC7-213	ENST00000440293	CAPN6	Q9Y6Q1	641 aa		18.17	■□□□□ 0.5
HDAC7-213	ENST00000440293	TMEM131	Q92545	1883 aa		18.17	■□□□□ 0.5
HDAC7-213	ENST00000440293	ATXN7	O15265	892 aa	Predicted RBP	18.16	■□□□□ 0.5
HDAC7-213	ENST00000440293	DDX3Y	O15523	660 aa	Known RBP	18.16	■□□□□ 0.5
HDAC7-213	ENST00000440293	TM7SF2	O76062	418 aa		18.16	■□□□□ 0.5
HDAC7-213	ENST00000440293	HLA-DQB2	P05538	268 aa		18.16	■□□□□ 0.5
HDAC7-213	ENST00000440293	PECAM1	P16284	738 aa	Predicted RBP	18.16	■□□□□ 0.5
HDAC7-213	ENST00000440293	ACP1	P24666	158 aa		18.16	■□□□□ 0.5
HDAC7-213	ENST00000440293	NFKBIA	P25963	317 aa		18.16	■□□□□ 0.5
HDAC7-213	ENST00000440293	E2F1	Q01094	437 aa		18.16	■□□□□ 0.5
HDAC7-213	ENST00000440293	TRAF2	Q12933	501 aa		18.16	■□□□□ 0.5
HDAC7-213	ENST00000440293	DNAJC3	Q13217	504 aa		18.16	■□□□□ 0.5
HDAC7-213	ENST00000440293	FGL2	Q14314	439 aa		18.16	■□□□□ 0.5
HDAC7-213	ENST00000440293	PRAMEF14	Q5SWL7	426 aa		18.16	■□□□□ 0.5
HDAC7-213	ENST00000440293	ARMC12	Q5T9G4	340 aa		18.16	■□□□□ 0.5
HDAC7-213	ENST00000440293	HES3	Q5TGS1	186 aa		18.16	■□□□□ 0.5
HDAC7-213	ENST00000440293	KANSL1	Q7Z3B3	1105 aa		18.16	■□□□□ 0.5
HDAC7-213	ENST00000440293	ARRDC2	Q8TBH0	407 aa		18.16	■□□□□ 0.5
HDAC7-213	ENST00000440293	FAM174A	Q8TBP5	190 aa		18.16	■□□□□ 0.5
HDAC7-213	ENST00000440293	FGF11	Q92914	225 aa		18.16	■□□□□ 0.5
HDAC7-213	ENST00000440293	KLHDC7B	Q96G42	594 aa		18.16	■□□□□ 0.5
HDAC7-213	ENST00000440293	HES6	Q96HZ4	224 aa		18.16	■□□□□ 0.5
HDAC7-213	ENST00000440293	DCBLD2	Q96PD2	775 aa		18.16	■□□□□ 0.5
HDAC7-213	ENST00000440293	LENG8	Q96PV6	779 aa	Predicted RBP	18.16	■□□□□ 0.5
HDAC7-213	ENST00000440293	WRAP53	Q9BUR4	548 aa	Known RBP	18.16	■□□□□ 0.5
HDAC7-213	ENST00000440293	LZTFL1	Q9NQ48	299 aa		18.16	■□□□□ 0.5
HDAC7-213	ENST00000440293	SEPT10	Q9P0V9	454 aa		18.16	■□□□□ 0.5
HDAC7-213	ENST00000440293	PHTF1	Q9UMS5	762 aa		18.16	■□□□□ 0.5
HDAC7-213	ENST00000440293	AK5	Q9Y6K8	562 aa		18.16	■□□□□ 0.5
HDAC7-213	ENST00000440293	CAPN8	A6NHC0	703 aa		18.15	■□□□□ 0.5
HDAC7-213	ENST00000440293	APOC4-APOC2	K7ER74	178 aa		18.15	■□□□□ 0.5
HDAC7-213	ENST00000440293	MTSS1	O43312	755 aa		18.15	■□□□□ 0.5
HDAC7-213	ENST00000440293	TJP3	O95049	919 aa		18.15	■□□□□ 0.5
HDAC7-213	ENST00000440293	APOC2	P02655	101 aa		18.15	■□□□□ 0.5
HDAC7-213	ENST00000440293	DSC2	Q02487	901 aa		18.15	■□□□□ 0.5
HDAC7-213	ENST00000440293	NIPAL4	Q0D2K0	466 aa		18.15	■□□□□ 0.5
HDAC7-213	ENST00000440293	ZBTB17	Q13105	803 aa		18.15	■□□□□ 0.5
HDAC7-213	ENST00000440293	TEX44	Q53QW1	395 aa		18.15	■□□□□ 0.5
HDAC7-213	ENST00000440293	B4GALNT4	Q76KP1	1039 aa		18.15	■□□□□ 0.5
HDAC7-213	ENST00000440293	ZC3H18	Q86VM9	953 aa	Known RBP	18.15	■□□□□ 0.5
HDAC7-213	ENST00000440293	NDUFAF2	Q8N183	169 aa		18.15	■□□□□ 0.5
HDAC7-213	ENST00000440293	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	18.15	■□□□□ 0.5
HDAC7-213	ENST00000440293	CNTD1	Q8N815	330 aa		18.15	■□□□□ 0.5
HDAC7-213	ENST00000440293	TMEM145	Q8NBT3	493 aa		18.15	■□□□□ 0.5
HDAC7-213	ENST00000440293	RAI2	Q9Y5P3	530 aa		18.15	■□□□□ 0.5
HDAC7-213	ENST00000440293	TEX51	A0A1B0GUA7	166 aa		18.14	■□□□□ 0.49
HDAC7-213	ENST00000440293	CFAP69	A5D8W1	941 aa		18.14	■□□□□ 0.49
HDAC7-213	ENST00000440293	HACD1	B0YJ81	288 aa		18.14	■□□□□ 0.49
HDAC7-213	ENST00000440293	PGLS	O95336	258 aa		18.14	■□□□□ 0.49
HDAC7-213	ENST00000440293	CP	P00450	1065 aa		18.14	■□□□□ 0.49
HDAC7-213	ENST00000440293	PRKCG	P05129	697 aa		18.14	■□□□□ 0.49
HDAC7-213	ENST00000440293	PTMA	P06454	111 aa	Known RBP	18.14	■□□□□ 0.49
HDAC7-213	ENST00000440293	ACTN2	P35609	894 aa		18.14	■□□□□ 0.49
HDAC7-213	ENST00000440293	ZNF211	Q13398	564 aa	Predicted RBP	18.14	■□□□□ 0.49
HDAC7-213	ENST00000440293	XRCC4	Q13426	336 aa		18.14	■□□□□ 0.49
HDAC7-213	ENST00000440293	PRKD1	Q15139	912 aa	Predicted RBP	18.14	■□□□□ 0.49
HDAC7-213	ENST00000440293	DCBLD1	Q8N8Z6	715 aa		18.14	■□□□□ 0.49
HDAC7-213	ENST00000440293	SLC39A7	Q92504	469 aa		18.14	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms