RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 DDIASQ8IXT1 998 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 THEM5Q8N1Q8 247 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 PGBD5Q8N414 524 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 IGSF8Q969P0 613 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 IMP4Q96G21 291 aaKnown RBP13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 UBXN10Q96LJ8 280 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 UNC93B1Q9H1C4 597 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 MEAF6Q9HAF1 191 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 VCX3AQ9NNX9 186 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 SPAG4Q9NPE6 437 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 TBC1D13Q9NVG8 400 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 AURKCQ9UQB9 309 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 COMMD3-BMI1R4GMX3 469 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 MKI67P46013 3256 aaKnown RBP13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 UBXN8O00124 270 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 SLC22A2O15244 555 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 NRP2O60462 931 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 HSPA1AP0DMV8 641 aaKnown RBP13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 HSPA1BP0DMV9 641 aaKnown RBP13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 RENBPP51606 427 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 KPNA2P52292 529 aaKnown RBP13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 TAF1CQ15572 869 aaPredicted RBP13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 CHSY3Q70JA7 882 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 LCA5Q86VQ0 697 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 RETREG3Q86VR2 466 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 FUNDC1Q8IVP5 155 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 KLHDC8BQ8IXV7 354 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 TRPV1Q8NER1 839 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 CANT1Q8WVQ1 401 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 MYEOVQ96EZ4 313 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 PHF12Q96QT6 1004 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 CAAP1Q9H8G2 361 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 AKTIPQ9H8T0 292 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 NCF1BA6NI72 391 aaPredicted RBP13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 NCF1CA8MVU1 366 aaPredicted RBP13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 H3BSA7 217 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 RBP1P09455 135 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 PIM1P11309 404 aaPredicted RBP13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 NCF1P14598 390 aaPredicted RBP13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 CES1P23141 567 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 CYP2C18P33260 490 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 ACVRL1P37023 503 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 GRB7Q14451 532 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 SQLEQ14534 574 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 ACAP2Q15057 778 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 IFNEQ86WN2 208 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 CFAP52Q8N1V2 620 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 PTGR2Q8N8N7 351 aaPredicted RBP13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 DCBLD1Q8N8Z6 715 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 ATAD1Q8NBU5 361 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 DLG3Q92796 817 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 ESAMQ96AP7 390 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 DGCR14Q96DF8 476 aaKnown RBP13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 C19orf60Q96EN9 201 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 CYP2S1Q96SQ9 504 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 PRKD2Q9BZL6 878 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 MID1IP1Q9NPA3 183 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 GMIPQ9P107 970 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 FAM50BQ9Y247 325 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 DNAJC15Q9Y5T4 150 aa13.58□□□□□ -0.24
HERPUD1-204ENST00000439977 GLTPD2A6NH11 291 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 PLOD2O00469 737 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 GPR182O15218 404 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 AKAP10O43572 662 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 TNFAIP8O95379 198 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 LINC00032P0C843 101 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 PSMC3P17980 439 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 HOXC13P31276 330 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 CLCN5P51795 746 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 SEMA3AQ14563 771 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 RFTN1Q14699 578 aaPredicted RBP13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 UNC50Q53HI1 259 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 MS4A13Q5J8X5 152 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 ZNF678Q5SXM1 525 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 ZNF549Q6P9A3 640 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 SCIMPQ6UWF3 145 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 KLHDC9Q8NEP7 349 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 TRPC4APQ8TEL6 797 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 PTCD2Q8WV60 388 aaKnown RBP13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 NCSTNQ92542 709 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 TMIGD2Q96BF3 282 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 SEMA3CQ99985 751 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 CROTQ9UKG9 612 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 RNF11Q9Y3C5 154 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 A0A0U1RQS6 177 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 UBA6A0AVT1 1052 aaPredicted RBP13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 SAC3D1A6NKF1 404 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 H3BMM5 538 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 MUSKO15146 869 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 IMPDH1P20839 514 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 PCSK6P29122 969 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 HOXC8P31273 242 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 CDH15P55291 814 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 TBX4P57082 545 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 RHDQ02161 417 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 MAP7D1Q3KQU3 841 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 C6orf10Q5SRN2 563 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 LARP4Q71RC2 724 aaKnown RBP eCLIP13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 CALML6Q8TD86 181 aa13.57□□□□□ -0.24
HERPUD1-204ENST00000439977 RPRD1AQ96P16 312 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms