RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 ZNF806P0C7X5 589 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 CES1P23141 567 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 ITGB7P26010 798 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 HSPA9P38646 679 aaKnown RBP7.53□□□□□ -1.2
COPS3-203ENST00000439936 CCR5P51681 352 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 NEK3P51956 506 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 ADPRHP54922 357 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 FAM193AP78312 1265 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 BCL2L1Q07817 233 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 ITKQ08881 620 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 NIPAL4Q0D2K0 466 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 SPEM2Q0P670 501 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 XRCC4Q13426 336 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 GRM3Q14832 879 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 TEX44Q53QW1 395 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 SYCP2LQ5T4T6 812 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 CCDC181Q5TID7 509 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 LYSMD4Q5XG99 296 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 KIAA0895LQ68EN5 471 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 PARS2Q7L3T8 475 aaKnown RBP7.53□□□□□ -1.2
COPS3-203ENST00000439936 SYT12Q8IV01 421 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 TRIM58Q8NG06 486 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 ARRDC2Q8TBH0 407 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 ACTL9Q8TC94 416 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 HAUS1Q96CS2 278 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 PPP1R16AQ96I34 528 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 FEM1CQ96JP0 617 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 ZNF641Q96N77 438 aaPredicted RBP7.53□□□□□ -1.2
COPS3-203ENST00000439936 TUBGCP5Q96RT8 1024 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 SEMA3CQ99985 751 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 MGME1Q9BQP7 344 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 OSBPL1AQ9BXW6 950 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 SMOC1Q9H4F8 434 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 C10orf88Q9H8K7 445 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 DKK3Q9UBP4 350 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 AMACRQ9UHK6 382 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 EIF2B4Q9UI10 523 aaKnown RBP7.53□□□□□ -1.2
COPS3-203ENST00000439936 PILRBQ9UKJ0 227 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 PYCARDQ9ULZ3 195 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 ATP8A1Q9Y2Q0 1164 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 PCDHGA5Q9Y5G8 931 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 FADS3Q9Y5Q0 445 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 PTPRZ1P23471 2315 aaPredicted RBP7.53□□□□□ -1.2
COPS3-203ENST00000439936 KNL1Q8NG31 2342 aa7.53□□□□□ -1.2
COPS3-203ENST00000439936 PLXNA2O75051 1894 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.52□□□□□ -1.21
COPS3-203ENST00000439936 A0A1W2PPC4 97 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 USP27XA6NNY8 438 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 HACD1B0YJ81 288 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 PATE3B3GLJ2 98 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 H7C0C1 242 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 PPP1R12AO14974 1030 aaPredicted RBP7.52□□□□□ -1.21
COPS3-203ENST00000439936 AREL1O15033 823 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 HTRA2O43464 458 aaPredicted RBP7.52□□□□□ -1.21
COPS3-203ENST00000439936 AP1G1O43747 822 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 RRP9O43818 475 aaKnown RBP7.52□□□□□ -1.21
COPS3-203ENST00000439936 RNGTTO60942 597 aaKnown RBP7.52□□□□□ -1.21
COPS3-203ENST00000439936 NEBLO76041 1014 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 PCDH8O95206 1070 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 ADRB3P13945 408 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 EPB42P16452 691 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 RBL1P28749 1068 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 MPLP40238 635 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 CHRNA4P43681 627 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 ATP5OP48047 213 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 AP1S1P61966 158 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 IRX4P78413 519 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 IFI35P80217 286 aaPredicted RBP7.52□□□□□ -1.21
COPS3-203ENST00000439936 OTUD4Q01804 1114 aaKnown RBP7.52□□□□□ -1.21
COPS3-203ENST00000439936 DSC2Q02487 901 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 ZBTB17Q13105 803 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 PRKD1Q15139 912 aaPredicted RBP7.52□□□□□ -1.21
COPS3-203ENST00000439936 NOMO1Q15155 1222 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 UGP2Q16851 508 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 RALGPS1Q5JS13 557 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 ZNF569Q5MCW4 686 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 WDR45BQ5MNZ6 344 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 ALG1LQ6GMV1 187 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 NEK5Q6P3R8 708 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 PID1Q7Z2X4 250 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 ZSWIM9Q86XI8 627 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.52□□□□□ -1.21
COPS3-203ENST00000439936 TFB1MQ8WVM0 346 aaKnown RBP7.52□□□□□ -1.21
COPS3-203ENST00000439936 KLK6Q92876 244 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 RAB7BQ96AH8 199 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 ECHDC3Q96DC8 303 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 ALS2CR12Q96Q35 445 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 FAM118BQ9BPY3 351 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 ORAI3Q9BRQ5 295 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 CEP41Q9BYV8 373 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 ATP13A3Q9H7F0 1226 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 PREBQ9HCU5 417 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 PARD6AQ9NPB6 346 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 SEMA4GQ9NTN9 838 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 SEPT10Q9P0V9 454 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 ZFR2Q9UPR6 939 aaKnown RBP7.52□□□□□ -1.21
COPS3-203ENST00000439936 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.52□□□□□ -1.21
COPS3-203ENST00000439936 SLCO1B1Q9Y6L6 691 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 GPR179Q6PRD1 2367 aa7.52□□□□□ -1.21
COPS3-203ENST00000439936 OTOGLQ3ZCN5 2332 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms