RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 Q6ZSR6 202 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 SPATS2Q86XZ4 545 aaKnown RBP11.85□□□□□ -0.51
HSPG2-206ENST00000439717 CBARPQ8N350 705 aaPredicted RBP11.85□□□□□ -0.51
HSPG2-206ENST00000439717 LPCAT1Q8NF37 534 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 OR13H1Q8NG92 308 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 SPATA22Q8NHS9 363 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 SLC35B2Q8TB61 432 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 MAIP1Q8WWC4 291 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 IFT43Q96FT9 208 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 COQ10AQ96MF6 247 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 PPP1R2P1Q96PQ5 205 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 TRIB3Q96RU7 358 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 LYSMD1Q96S90 227 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 ELF4Q99607 663 aaPredicted RBP11.85□□□□□ -0.51
HSPG2-206ENST00000439717 FAM118BQ9BPY3 351 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 MLPHQ9BV36 600 aaPredicted RBP11.85□□□□□ -0.51
HSPG2-206ENST00000439717 GBA3Q9H227 469 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 USP29Q9HBJ7 922 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 GPR27Q9NS67 375 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 TRMT1Q9NXH9 659 aaKnown RBP11.85□□□□□ -0.51
HSPG2-206ENST00000439717 RSPH14Q9UHP6 348 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 CA5BQ9Y2D0 317 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 ZKSCAN5Q9Y2L8 839 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 COQ6Q9Y2Z9 468 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 TRPM6Q9BX84 2022 aa11.84□□□□□ -0.51
HSPG2-206ENST00000439717 A0A1B0GTQ1 180 aa11.84□□□□□ -0.51
HSPG2-206ENST00000439717 TCRBV7S2A1N4TA0A589 114 aa11.84□□□□□ -0.51
HSPG2-206ENST00000439717 POM121BA6NF01 834 aa11.84□□□□□ -0.51
HSPG2-206ENST00000439717 C5orf60A6NFR6 353 aa11.84□□□□□ -0.51
HSPG2-206ENST00000439717 A8MX80 341 aa11.84□□□□□ -0.51
HSPG2-206ENST00000439717 H0Y8X5 98 aa11.84□□□□□ -0.51
HSPG2-206ENST00000439717 PMPCBO75439 489 aa11.84□□□□□ -0.51
HSPG2-206ENST00000439717 RECQL5O94762 991 aaPredicted RBP11.84□□□□□ -0.51
HSPG2-206ENST00000439717 MT-CYBP00156 380 aaPredicted RBP11.84□□□□□ -0.51
HSPG2-206ENST00000439717 ALPIP09923 528 aa11.84□□□□□ -0.51
HSPG2-206ENST00000439717 CTPS1P17812 591 aa11.84□□□□□ -0.51
HSPG2-206ENST00000439717 LHCGRP22888 699 aa11.84□□□□□ -0.51
HSPG2-206ENST00000439717 IGFALSP35858 605 aa11.84□□□□□ -0.51
HSPG2-206ENST00000439717 TNNT3P45378 269 aaPredicted RBP11.84□□□□□ -0.51
HSPG2-206ENST00000439717 RXRGP48443 463 aa11.84□□□□□ -0.51
HSPG2-206ENST00000439717 ARRB1P49407 418 aaPredicted RBP11.84□□□□□ -0.51
HSPG2-206ENST00000439717 CCT8P50990 548 aa11.84□□□□□ -0.51
HSPG2-206ENST00000439717 MPP3Q13368 585 aa11.84□□□□□ -0.51
HSPG2-206ENST00000439717 SUZ12Q15022 739 aaKnown RBP11.84□□□□□ -0.51
HSPG2-206ENST00000439717 ACOX1Q15067 660 aa11.84□□□□□ -0.51
HSPG2-206ENST00000439717 IRF4Q15306 451 aa11.84□□□□□ -0.51
HSPG2-206ENST00000439717 QPCTQ16769 361 aa11.84□□□□□ -0.51
HSPG2-206ENST00000439717 WSCD2Q2TBF2 565 aa11.84□□□□□ -0.51
HSPG2-206ENST00000439717 UAP1L1Q3KQV9 507 aa11.84□□□□□ -0.51
HSPG2-206ENST00000439717 ANKRD20A2Q5SQ80 823 aa11.84□□□□□ -0.51
HSPG2-206ENST00000439717 ANKRD20A1Q5TYW2 823 aa11.84□□□□□ -0.51
HSPG2-206ENST00000439717 ANKRD20A3Q5VUR7 823 aa11.84□□□□□ -0.51
HSPG2-206ENST00000439717 CCDC70Q6NSX1 233 aa11.84□□□□□ -0.51
HSPG2-206ENST00000439717 PTAR1Q7Z6K3 402 aaPredicted RBP11.84□□□□□ -0.51
HSPG2-206ENST00000439717 OR2I1PQ8NGU4 316 aa11.84□□□□□ -0.51
HSPG2-206ENST00000439717 SPATA13Q96N96 652 aa11.84□□□□□ -0.51
HSPG2-206ENST00000439717 SRPK1Q96SB4 655 aaKnown RBP11.84□□□□□ -0.51
HSPG2-206ENST00000439717 C10orf88Q9H8K7 445 aa11.84□□□□□ -0.51
HSPG2-206ENST00000439717 IL21RQ9HBE5 538 aa11.84□□□□□ -0.51
HSPG2-206ENST00000439717 MBNL1Q9NR56 388 aaKnown RBP11.84□□□□□ -0.51
HSPG2-206ENST00000439717 TM7SF3Q9NS93 570 aa11.84□□□□□ -0.51
HSPG2-206ENST00000439717 FNDC3AQ9Y2H6 1198 aaKnown RBP11.84□□□□□ -0.51
HSPG2-206ENST00000439717 R3HDM2Q9Y2K5 976 aaKnown RBP11.84□□□□□ -0.51
HSPG2-206ENST00000439717 CACNA1EQ15878 2313 aa11.83□□□□□ -0.51
HSPG2-206ENST00000439717 LOC285095A0A1B0GVY8 99 aa11.83□□□□□ -0.52
HSPG2-206ENST00000439717 LIASO43766 372 aa11.83□□□□□ -0.52
HSPG2-206ENST00000439717 PCDHGA12O60330 932 aa11.83□□□□□ -0.52
HSPG2-206ENST00000439717 ANXA9O76027 345 aa11.83□□□□□ -0.52
HSPG2-206ENST00000439717 NDST3O95803 873 aa11.83□□□□□ -0.52
HSPG2-206ENST00000439717 CD59P13987 128 aa11.83□□□□□ -0.52
HSPG2-206ENST00000439717 GM2AP17900 193 aa11.83□□□□□ -0.52
HSPG2-206ENST00000439717 STIP1P31948 543 aaKnown RBP11.83□□□□□ -0.52
HSPG2-206ENST00000439717 GEMP55040 296 aa11.83□□□□□ -0.52
HSPG2-206ENST00000439717 WNT3AP56704 352 aa11.83□□□□□ -0.52
HSPG2-206ENST00000439717 PTSQ03393 145 aa11.83□□□□□ -0.52
HSPG2-206ENST00000439717 MTM1Q13496 603 aa11.83□□□□□ -0.52
HSPG2-206ENST00000439717 PTK2BQ14289 1009 aa11.83□□□□□ -0.52
HSPG2-206ENST00000439717 PRPSAP1Q14558 356 aa11.83□□□□□ -0.52
HSPG2-206ENST00000439717 PCSK7Q16549 785 aa11.83□□□□□ -0.52
HSPG2-206ENST00000439717 ZNF569Q5MCW4 686 aa11.83□□□□□ -0.52
HSPG2-206ENST00000439717 FAM182AQ5T1J6 154 aa11.83□□□□□ -0.52
HSPG2-206ENST00000439717 LRRC66Q68CR7 880 aa11.83□□□□□ -0.52
HSPG2-206ENST00000439717 ESRP1Q6NXG1 681 aaKnown RBP11.83□□□□□ -0.52
HSPG2-206ENST00000439717 CRTC1Q6UUV9 634 aa11.83□□□□□ -0.52
HSPG2-206ENST00000439717 KDELC1Q6UW63 502 aa11.83□□□□□ -0.52
HSPG2-206ENST00000439717 DBX2Q6ZNG2 339 aa11.83□□□□□ -0.52
HSPG2-206ENST00000439717 TSPAN33Q86UF1 283 aa11.83□□□□□ -0.52
HSPG2-206ENST00000439717 SLC22A18ASQ8N1D0 253 aa11.83□□□□□ -0.52
HSPG2-206ENST00000439717 NUS1Q96E22 293 aa11.83□□□□□ -0.52
HSPG2-206ENST00000439717 DTD2Q96FN9 168 aa11.83□□□□□ -0.52
HSPG2-206ENST00000439717 PBKQ96KB5 322 aa11.83□□□□□ -0.52
HSPG2-206ENST00000439717 MAGEE1Q9HCI5 957 aa11.83□□□□□ -0.52
HSPG2-206ENST00000439717 UBP1Q9NZI7 540 aa11.83□□□□□ -0.52
HSPG2-206ENST00000439717 AAR2Q9Y312 384 aaKnown RBP11.83□□□□□ -0.52
HSPG2-206ENST00000439717 ADAMTS9Q9P2N4 1935 aa11.83□□□□□ -0.52
HSPG2-206ENST00000439717 SPTY2D1-AS1A0A0U1RR47 76 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 RGSL1A5PLK6 1076 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 CEP104O60308 925 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 GCATO75600 419 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 FGGP02679 453 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms