RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 SYBUQ9NX95 663 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 EURLQ9NYK6 297 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 NKIRAS1Q9NYS0 192 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 MOCS1Q9NZB8 636 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 GDE1Q9NZC3 331 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 TXNDC16Q9P2K2 825 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 DNMT3BQ9UBC3 853 aaKnown RBP4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 VPS28Q9UK41 221 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 SMG5Q9UPR3 1016 aaKnown RBP4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 YBX2Q9Y2T7 364 aaKnown RBP4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 RPS6KL1Q9Y6S9 549 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 FAM169AQ9Y6X4 670 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 TNRC18O15417 2968 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 MYOFQ9NZM1 2061 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 BPTFQ12830 3046 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 ATG2AQ2TAZ0 1938 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4□□□□□ -1.77
HMGB1P37-201ENST00000439613 A0A0D9SEW6 157 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4□□□□□ -1.77
HMGB1P37-201ENST00000439613 LOC285095A0A1B0GVY8 99 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 HEATR9A2RTY3 570 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 FAM47DPA6NHR8 397 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 F5H423 210 aaPredicted RBP4□□□□□ -1.77
HMGB1P37-201ENST00000439613 PER2O15055 1255 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 INSIG1O15503 277 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 PRPF4O43172 522 aaKnown RBP eCLIP4□□□□□ -1.77
HMGB1P37-201ENST00000439613 USP12O75317 370 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 MOSPD3O75425 235 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 ZMPSTE24O75844 475 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 FAM155BO75949 473 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 ALX3O95076 343 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 ZWINTO95229 277 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 PAPSS2O95340 614 aaPredicted RBP4□□□□□ -1.77
HMGB1P37-201ENST00000439613 NDST3O95803 873 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 DLGAP3O95886 979 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 MT-CYBP00156 380 aaPredicted RBP4□□□□□ -1.77
HMGB1P37-201ENST00000439613 PENKP01210 267 aaPredicted RBP4□□□□□ -1.77
HMGB1P37-201ENST00000439613 MT-ND3P03897 115 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 MMP2P08253 660 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 SNRPAP09012 282 aaKnown RBP4□□□□□ -1.77
HMGB1P37-201ENST00000439613 BRAFP15056 766 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 HOXB8P17481 243 aaPredicted RBP4□□□□□ -1.77
HMGB1P37-201ENST00000439613 HLA-DPA1P20036 260 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 MAOBP27338 520 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 GCAP28676 217 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 SPRP35270 261 aaPredicted RBP4□□□□□ -1.77
HMGB1P37-201ENST00000439613 CCR2P41597 374 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 CHRNA4P43681 627 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 CSNK1DP48730 415 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 POLD2P49005 469 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 GYS2P54840 703 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 CSE1LP55060 971 aaKnown RBP4□□□□□ -1.77
HMGB1P37-201ENST00000439613 RPL26P61254 145 aaKnown RBP4□□□□□ -1.77
HMGB1P37-201ENST00000439613 AP1S1P61966 158 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 PDE1BQ01064 536 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 DSC2Q02487 901 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 CDK18Q07002 472 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 NIPAL4Q0D2K0 466 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 ADGRE1Q14246 886 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 GRM3Q14832 879 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 E2F5Q15329 346 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 SLC1A5Q15758 541 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 SEPT7Q16181 437 aaKnown RBP4□□□□□ -1.77
HMGB1P37-201ENST00000439613 SKIDA1Q1XH10 827 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 PLA2G4EQ3MJ16 856 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 ANKRD20A4Q4UJ75 823 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 CERCAMQ5T4B2 595 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 UBAP2Q5T6F2 1119 aaKnown RBP4□□□□□ -1.77
HMGB1P37-201ENST00000439613 GRTP1Q5TC63 336 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 DENND5AQ6IQ26 1287 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 PKN3Q6P5Z2 889 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 LEKR1Q6ZMV7 388 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 TIFABQ6ZNK6 161 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 ACAD11Q709F0 780 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 MARK2Q7KZI7 788 aaKnown RBP4□□□□□ -1.77
HMGB1P37-201ENST00000439613 GRASPQ7Z6J2 395 aaPredicted RBP4□□□□□ -1.77
HMGB1P37-201ENST00000439613 SRLQ86TD4 932 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 RBM23Q86U06 439 aaKnown RBP4□□□□□ -1.77
HMGB1P37-201ENST00000439613 PRPF39Q86UA1 669 aaKnown RBP4□□□□□ -1.77
HMGB1P37-201ENST00000439613 TRABD2AQ86V40 505 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 EXOC3L1Q86VI1 746 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 SULF2Q8IWU5 870 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 BBS7Q8IWZ6 715 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 SRRM1Q8IYB3 904 aaKnown RBP4□□□□□ -1.77
HMGB1P37-201ENST00000439613 MPP5Q8N3R9 675 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 SH2D3CQ8N5H7 860 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 PPM1NQ8N819 430 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 DCAF4L2Q8NA75 395 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 VN1R2Q8NFZ6 395 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 OR7D4Q8NG98 312 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 SPATA22Q8NHS9 363 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 ARRDC2Q8TBH0 407 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 GRIN3AQ8TCU5 1115 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 ACMSDQ8TDX5 336 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 DYDC1Q8WWB3 177 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 ARNTL2Q8WYA1 636 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 ATP2A3Q93084 1043 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 WBP2Q969T9 261 aa4□□□□□ -1.77
HMGB1P37-201ENST00000439613 ISG20Q96AZ6 181 aaKnown RBP4□□□□□ -1.77
HMGB1P37-201ENST00000439613 ZNF669Q96BR6 464 aaPredicted RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms